RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ERG28Q9UKR5 140 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 COL6A5A8TX70 2615 aa6.93□□□□□ -1.3
PRPF3-206ENST00000493553 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 F8W1H4 67 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 DEFB4AO15263 64 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 APOMO95445 188 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 COX6CP09669 75 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 CFC1BP0CG36 223 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 CFC1P0CG37 223 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 ZNF625Q96I27 306 aaPredicted RBP6.92□□□□□ -1.3
PRPF3-206ENST00000493553 LITAFQ99732 161 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
PRPF3-206ENST00000493553 HTN3P15516 51 aa6.91□□□□□ -1.3
PRPF3-206ENST00000493553 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
PRPF3-206ENST00000493553 CD164L2Q6UWJ8 174 aa6.91□□□□□ -1.3
PRPF3-206ENST00000493553 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
PRPF3-206ENST00000493553 TRAV8-4A0A0B4J246 113 aa6.9□□□□□ -1.3
PRPF3-206ENST00000493553 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.3
PRPF3-206ENST00000493553 K7ERU9 68 aa6.9□□□□□ -1.3
PRPF3-206ENST00000493553 COX7A2LO14548 114 aa6.9□□□□□ -1.3
PRPF3-206ENST00000493553 Q8IZM0 81 aa6.9□□□□□ -1.3
PRPF3-206ENST00000493553 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 TSPAN13O95857 204 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 IGHV3-33P01772 117 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 ANGP03950 147 aaKnown RBP6.89□□□□□ -1.31
PRPF3-206ENST00000493553 SCGB1C2P0DMR2 95 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
PRPF3-206ENST00000493553 NBEAL2Q6ZNJ1 2754 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 A0A096LPF7 62 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 IGKV3OR2-268A0A0C4DH90 116 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 J3QR89 54 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 PSMB2P49721 201 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 REG3AQ06141 175 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 Q1RN00 199 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
PRPF3-206ENST00000493553 CFAP161Q6P656 301 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 C15orf53Q8NAA6 179 aa6.88□□□□□ -1.31
PRPF3-206ENST00000493553 TRAV13-2A0A0B4J235 113 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 G3V4G9 280 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 XCL1P47992 114 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 CKS1BP61024 79 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 COX17Q14061 63 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 ADAMTSL4-AS1Q5T5F5 129 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 LYPD5Q6UWN5 251 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
PRPF3-206ENST00000493553 NAA38Q9BRA0 125 aaKnown RBP6.87□□□□□ -1.31
PRPF3-206ENST00000493553 TRAV10A0A0B4J240 114 aa6.86□□□□□ -1.31
PRPF3-206ENST00000493553 CRPP02741 224 aa6.86□□□□□ -1.31
PRPF3-206ENST00000493553 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
PRPF3-206ENST00000493553 CHCHD10Q8WYQ3 142 aaPredicted RBP6.86□□□□□ -1.31
PRPF3-206ENST00000493553 PRR34Q9NV39 138 aa6.86□□□□□ -1.31
PRPF3-206ENST00000493553 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
PRPF3-206ENST00000493553 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
PRPF3-206ENST00000493553 DEFB131BA0A096LNP1 70 aa6.85□□□□□ -1.31
PRPF3-206ENST00000493553 M0QXV9 152 aa6.85□□□□□ -1.31
PRPF3-206ENST00000493553 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
PRPF3-206ENST00000493553 TM2D3Q9BRN9 247 aa6.85□□□□□ -1.31
PRPF3-206ENST00000493553 A0A0J9YWU9 116 aa6.84□□□□□ -1.31
PRPF3-206ENST00000493553 F8WDY8 70 aa6.84□□□□□ -1.31
PRPF3-206ENST00000493553 LINC00158P58513 81 aa6.84□□□□□ -1.31
PRPF3-206ENST00000493553 OCIAD2Q56VL3 154 aa6.84□□□□□ -1.31
PRPF3-206ENST00000493553 CUBNO60494 3623 aa6.84□□□□□ -1.31
PRPF3-206ENST00000493553 Q6ZTC4 211 aa6.83□□□□□ -1.32
PRPF3-206ENST00000493553 RETNQ9HD89 108 aa6.83□□□□□ -1.32
PRPF3-206ENST00000493553 MGAM2Q2M2H8 2515 aa6.82□□□□□ -1.32
PRPF3-206ENST00000493553 H3BMG7 143 aa6.82□□□□□ -1.32
PRPF3-206ENST00000493553 TRIAP1O43715 76 aa6.82□□□□□ -1.32
PRPF3-206ENST00000493553 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
PRPF3-206ENST00000493553 C1orf43Q9BWL3 253 aa6.82□□□□□ -1.32
PRPF3-206ENST00000493553 NOTCH1P46531 2555 aa6.82□□□□□ -1.32
PRPF3-206ENST00000493553 DEFB121Q5J5C9 76 aa6.81□□□□□ -1.32
PRPF3-206ENST00000493553 LINC01556Q5JQF7 62 aa6.81□□□□□ -1.32
PRPF3-206ENST00000493553 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
PRPF3-206ENST00000493553 KLK12Q9UKR0 248 aa6.81□□□□□ -1.32
PRPF3-206ENST00000493553 H7C2G1 150 aa6.8□□□□□ -1.32
PRPF3-206ENST00000493553 LINC01600Q96MT4 127 aa6.8□□□□□ -1.32
PRPF3-206ENST00000493553 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
PRPF3-206ENST00000493553 GVQW2A0A096LPI5 108 aaPredicted RBP6.79□□□□□ -1.32
PRPF3-206ENST00000493553 K7EIL1 84 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 NDUFC2O95298 119 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 TCL1BO95988 128 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 CCL18P55774 89 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 NANOS2P60321 138 aaKnown RBP6.79□□□□□ -1.32
PRPF3-206ENST00000493553 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 DAND5Q8N907 189 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 UBE2WQ96B02 151 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 RMI2Q96E14 147 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 CBY1Q9Y3M2 126 aa6.79□□□□□ -1.32
PRPF3-206ENST00000493553 H0YGX0 51 aa6.78□□□□□ -1.32
PRPF3-206ENST00000493553 NPC2P61916 151 aa6.78□□□□□ -1.32
PRPF3-206ENST00000493553 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
PRPF3-206ENST00000493553 KIAA0087Q14695 138 aa6.78□□□□□ -1.32
PRPF3-206ENST00000493553 PRO0461Q9UI25 63 aa6.78□□□□□ -1.32
PRPF3-206ENST00000493553 A0A0U1RRA0 63 aa6.77□□□□□ -1.33
PRPF3-206ENST00000493553 H3BT86 120 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms