RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
GPNMB-213ENST00000492512 NDUFA6P56556 154 aa8.03□□□□□ -1.12
GPNMB-213ENST00000492512 RIGQ13278 110 aa8.03□□□□□ -1.12
GPNMB-213ENST00000492512 C2orf82Q6UX34 121 aa8.03□□□□□ -1.12
GPNMB-213ENST00000492512 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
GPNMB-213ENST00000492512 GNB1LQ9BYB4 327 aa8.03□□□□□ -1.12
GPNMB-213ENST00000492512 SPANXA1Q9NS26 97 aa8.03□□□□□ -1.12
GPNMB-213ENST00000492512 TRAPPC1Q9Y5R8 145 aa8.03□□□□□ -1.12
GPNMB-213ENST00000492512 TCAPO15273 167 aa8.02□□□□□ -1.13
GPNMB-213ENST00000492512 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
GPNMB-213ENST00000492512 AKR1D1P51857 326 aa8.02□□□□□ -1.13
GPNMB-213ENST00000492512 MRPS36P82909 103 aaKnown RBP8.02□□□□□ -1.13
GPNMB-213ENST00000492512 COA6Q5JTJ3 125 aaKnown RBP8.02□□□□□ -1.13
GPNMB-213ENST00000492512 NAT8BQ9UHF3 227 aa8.02□□□□□ -1.13
GPNMB-213ENST00000492512 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
GPNMB-213ENST00000492512 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
GPNMB-213ENST00000492512 LBHQ53QV2 105 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-213ENST00000492512 ATP5L2Q7Z4Y8 100 aa8.01□□□□□ -1.13
GPNMB-213ENST00000492512 C20orf78Q9BR46 151 aa8.01□□□□□ -1.13
GPNMB-213ENST00000492512 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
GPNMB-213ENST00000492512 MRPL51Q4U2R6 128 aaKnown RBP8□□□□□ -1.13
GPNMB-213ENST00000492512 S100A2P29034 98 aa7.99□□□□□ -1.13
GPNMB-213ENST00000492512 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
GPNMB-213ENST00000492512 FAM104BQ5XKR9 115 aa7.99□□□□□ -1.13
GPNMB-213ENST00000492512 LINC00469Q8N7U9 141 aa7.99□□□□□ -1.13
GPNMB-213ENST00000492512 MRPL18Q9H0U6 180 aaKnown RBP7.99□□□□□ -1.13
GPNMB-213ENST00000492512 BCE1O60756 84 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 SMIM6P0DI80 62 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 CKS2P33552 79 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 TMEM136Q6ZRR5 245 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 HIST3H2BBQ8N257 126 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 SMIM2Q9BVW6 85 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
GPNMB-213ENST00000492512 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
GPNMB-213ENST00000492512 A0A1B0GW15 77 aa7.97□□□□□ -1.13
GPNMB-213ENST00000492512 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
GPNMB-213ENST00000492512 MRPL54Q6P161 138 aaKnown RBP7.97□□□□□ -1.13
GPNMB-213ENST00000492512 LINC00173Q6ZV60 143 aa7.97□□□□□ -1.13
GPNMB-213ENST00000492512 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
GPNMB-213ENST00000492512 XAGE1AQ9HD64 81 aa7.97□□□□□ -1.13
GPNMB-213ENST00000492512 TNFRSF6BO95407 300 aa7.96□□□□□ -1.14
GPNMB-213ENST00000492512 PRSS2P07478 247 aa7.96□□□□□ -1.14
GPNMB-213ENST00000492512 IFI27P40305 119 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-213ENST00000492512 CKS1BP61024 79 aa7.96□□□□□ -1.14
GPNMB-213ENST00000492512 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
GPNMB-213ENST00000492512 MRPL55Q7Z7F7 128 aaKnown RBP7.96□□□□□ -1.14
GPNMB-213ENST00000492512 A0A1B0GXF2 115 aa7.95□□□□□ -1.14
GPNMB-213ENST00000492512 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
GPNMB-213ENST00000492512 TP73-AS1Q9UF72 201 aa7.95□□□□□ -1.14
GPNMB-213ENST00000492512 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-213ENST00000492512 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
GPNMB-213ENST00000492512 IGLV4-3A0A075B6K6 122 aa7.93□□□□□ -1.14
GPNMB-213ENST00000492512 C6orf226Q5I0X4 101 aa7.93□□□□□ -1.14
GPNMB-213ENST00000492512 C12orf57Q99622 126 aa7.93□□□□□ -1.14
GPNMB-213ENST00000492512 CRCT1Q9UGL9 99 aa7.93□□□□□ -1.14
GPNMB-213ENST00000492512 RPL37AP8A6NKH3 93 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 D6R8Y8 96 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 Q6ZN92 141 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 TEX43Q6ZNM6 134 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 HIST1H2BLQ99880 126 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 PYGO1Q9Y3Y4 419 aa7.92□□□□□ -1.14
GPNMB-213ENST00000492512 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
GPNMB-213ENST00000492512 NPYP01303 97 aa7.91□□□□□ -1.14
GPNMB-213ENST00000492512 FABP4P15090 132 aa7.91□□□□□ -1.14
GPNMB-213ENST00000492512 LINC01547P58512 204 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-213ENST00000492512 BAGE3Q86Y29 109 aa7.91□□□□□ -1.14
GPNMB-213ENST00000492512 LINC00167Q96N53 147 aa7.91□□□□□ -1.14
GPNMB-213ENST00000492512 C2orf88Q9BSF0 95 aa7.91□□□□□ -1.14
GPNMB-213ENST00000492512 PPDPFQ9H3Y8 114 aa7.91□□□□□ -1.14
GPNMB-213ENST00000492512 UBE2AP49459 152 aa7.9□□□□□ -1.14
GPNMB-213ENST00000492512 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
GPNMB-213ENST00000492512 Q8IZM0 81 aa7.9□□□□□ -1.14
GPNMB-213ENST00000492512 ALKBH7Q9BT30 221 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-213ENST00000492512 CTAG1AP78358 180 aa7.89□□□□□ -1.15
GPNMB-213ENST00000492512 GAGE10A6NGK3 116 aa7.88□□□□□ -1.15
GPNMB-213ENST00000492512 F8VRH5 84 aa7.88□□□□□ -1.15
GPNMB-213ENST00000492512 PPBPP02775 128 aa7.88□□□□□ -1.15
GPNMB-213ENST00000492512 KIAA1644Q3SXP7 199 aa7.88□□□□□ -1.15
GPNMB-213ENST00000492512 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
GPNMB-213ENST00000492512 SERF1AO75920 110 aa7.87□□□□□ -1.15
GPNMB-213ENST00000492512 S100A12P80511 92 aa7.87□□□□□ -1.15
GPNMB-213ENST00000492512 ZC2HC1BQ5TFG8 222 aa7.87□□□□□ -1.15
GPNMB-213ENST00000492512 JOSD1Q15040 202 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-213ENST00000492512 C18orf32Q8TCD1 76 aa7.86□□□□□ -1.15
GPNMB-213ENST00000492512 PYY3Q5JQD4 70 aa7.85□□□□□ -1.15
GPNMB-213ENST00000492512 ORMDL3Q8N138 153 aa7.85□□□□□ -1.15
GPNMB-213ENST00000492512 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
GPNMB-213ENST00000492512 VCX2Q9H322 139 aa7.85□□□□□ -1.15
GPNMB-213ENST00000492512 LINC00310P59036 64 aa7.84□□□□□ -1.15
GPNMB-213ENST00000492512 NKAPP1Q8N9T2 125 aa7.84□□□□□ -1.15
GPNMB-213ENST00000492512 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
GPNMB-213ENST00000492512 PRELID3AQ96N28 172 aa7.84□□□□□ -1.15
GPNMB-213ENST00000492512 AMELXQ99217 191 aa7.84□□□□□ -1.15
GPNMB-213ENST00000492512 CYSLTR1Q9Y271 337 aa7.84□□□□□ -1.15
GPNMB-213ENST00000492512 CXCL5P42830 114 aa7.83□□□□□ -1.16
GPNMB-213ENST00000492512 ASB16-AS1Q495Z4 193 aa7.83□□□□□ -1.16
GPNMB-213ENST00000492512 C2orf66Q6UXQ4 117 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms