RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-213ENST00000492506 CRYGDP07320 174 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 DEFB130BP0DP73 79 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 DEFB130AP0DP74 79 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 DAND5Q8N907 189 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 Q9H8V8 135 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 MSRB1Q9NZV6 116 aa9.08□□□□□ -0.96
HDAC3-213ENST00000492506 ZNF80P51504 273 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-213ENST00000492506 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
HDAC3-213ENST00000492506 COPS9Q8WXC6 57 aa9.07□□□□□ -0.96
HDAC3-213ENST00000492506 ICOSQ9Y6W8 199 aa9.07□□□□□ -0.96
HDAC3-213ENST00000492506 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
HDAC3-213ENST00000492506 H7C423 109 aa9.06□□□□□ -0.96
HDAC3-213ENST00000492506 GATA1P15976 413 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-213ENST00000492506 TMEM223A0PJW6 202 aa9.05□□□□□ -0.96
HDAC3-213ENST00000492506 HIST1H4AP62805 103 aaKnown RBP9.05□□□□□ -0.96
HDAC3-213ENST00000492506 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
HDAC3-213ENST00000492506 F8WDY8 70 aa9.04□□□□□ -0.96
HDAC3-213ENST00000492506 TRIAP1O43715 76 aa9.04□□□□□ -0.96
HDAC3-213ENST00000492506 SPINK13Q1W4C9 94 aa9.04□□□□□ -0.96
HDAC3-213ENST00000492506 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
HDAC3-213ENST00000492506 AMELXQ99217 191 aa9.04□□□□□ -0.96
HDAC3-213ENST00000492506 A0A0J9YXY3 114 aa9.03□□□□□ -0.96
HDAC3-213ENST00000492506 TIMM17BO60830 172 aa9.03□□□□□ -0.96
HDAC3-213ENST00000492506 GAS8-AS1O95177 125 aa9.03□□□□□ -0.96
HDAC3-213ENST00000492506 INSP01308 110 aa9.03□□□□□ -0.96
HDAC3-213ENST00000492506 RHOHQ15669 191 aa9.03□□□□□ -0.96
HDAC3-213ENST00000492506 Q6ZRN7 208 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-213ENST00000492506 UPK3BQ9BT76 320 aa9.03□□□□□ -0.96
HDAC3-213ENST00000492506 IGKV3D-20A0A0C4DH25 116 aa9.02□□□□□ -0.97
HDAC3-213ENST00000492506 IGIPA6NJ69 53 aa9.02□□□□□ -0.97
HDAC3-213ENST00000492506 FUSP35637 526 aaKnown RBP eCLIP9.02□□□□□ -0.97
HDAC3-213ENST00000492506 Q5VSD8 79 aa9.02□□□□□ -0.97
HDAC3-213ENST00000492506 MUSTN1Q8IVN3 82 aa9.02□□□□□ -0.97
HDAC3-213ENST00000492506 C16orf92Q96LL3 132 aa9.02□□□□□ -0.97
HDAC3-213ENST00000492506 VCYO14598 125 aa9.01□□□□□ -0.97
HDAC3-213ENST00000492506 ESRGQ1W209 222 aa9.01□□□□□ -0.97
HDAC3-213ENST00000492506 TRAV12-2A0A075B6T6 113 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 LOC107984640A0A0U1RRK4 108 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 NDUFC2O95298 119 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 ZNF415Q09FC8 603 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 IGFL4Q6B9Z1 124 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 SERP2Q8N6R1 65 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 Q8TAT8 98 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 DPH3Q96FX2 82 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 C2orf48Q96LS8 159 aa9□□□□□ -0.97
HDAC3-213ENST00000492506 MALP21145 153 aa8.99□□□□□ -0.97
HDAC3-213ENST00000492506 LINC00315P59091 139 aa8.99□□□□□ -0.97
HDAC3-213ENST00000492506 RPL18AQ02543 176 aaKnown RBP8.99□□□□□ -0.97
HDAC3-213ENST00000492506 RNF182Q8N6D2 247 aa8.99□□□□□ -0.97
HDAC3-213ENST00000492506 LINC00612Q8N6U2 182 aa8.99□□□□□ -0.97
HDAC3-213ENST00000492506 TRAV21A0A0B4J279 112 aa8.98□□□□□ -0.97
HDAC3-213ENST00000492506 TRBV6-5A0A0K0K1A5 114 aa8.98□□□□□ -0.97
HDAC3-213ENST00000492506 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
HDAC3-213ENST00000492506 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
HDAC3-213ENST00000492506 TRAV26-2A0A0B4J265 109 aa8.97□□□□□ -0.97
HDAC3-213ENST00000492506 H7C2G1 150 aa8.97□□□□□ -0.97
HDAC3-213ENST00000492506 NXPH4O95158 308 aa8.97□□□□□ -0.97
HDAC3-213ENST00000492506 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
HDAC3-213ENST00000492506 KRTAP10-1P60331 282 aa8.97□□□□□ -0.97
HDAC3-213ENST00000492506 MIAQ16674 131 aa8.97□□□□□ -0.97
HDAC3-213ENST00000492506 C16orf74Q96GX8 76 aa8.97□□□□□ -0.97
HDAC3-213ENST00000492506 ZNF22P17026 224 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-213ENST00000492506 Q6JHZ5 121 aa8.96□□□□□ -0.98
HDAC3-213ENST00000492506 LINC00477Q96M19 166 aa8.96□□□□□ -0.98
HDAC3-213ENST00000492506 TRAV13-1A0A0B4J241 112 aa8.95□□□□□ -0.98
HDAC3-213ENST00000492506 H3BNG1 76 aa8.95□□□□□ -0.98
HDAC3-213ENST00000492506 EIF4EBP3O60516 100 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-213ENST00000492506 HTN1P15515 57 aa8.95□□□□□ -0.98
HDAC3-213ENST00000492506 S100A4P26447 101 aaKnown RBP8.95□□□□□ -0.98
HDAC3-213ENST00000492506 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
HDAC3-213ENST00000492506 TIMM21Q9BVV7 248 aa8.95□□□□□ -0.98
HDAC3-213ENST00000492506 PHLDA3Q9Y5J5 127 aa8.95□□□□□ -0.98
HDAC3-213ENST00000492506 DNAH8Q96JB1 4490 aa8.95□□□□□ -0.98
HDAC3-213ENST00000492506 UBR4Q5T4S7 5183 aa8.94□□□□□ -0.98
HDAC3-213ENST00000492506 COX7A2LO14548 114 aa8.94□□□□□ -0.98
HDAC3-213ENST00000492506 BCE1O60756 84 aa8.94□□□□□ -0.98
HDAC3-213ENST00000492506 TRBV27A0A0K0K1C4 114 aa8.93□□□□□ -0.98
HDAC3-213ENST00000492506 TSHBP01222 138 aa8.93□□□□□ -0.98
HDAC3-213ENST00000492506 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-213ENST00000492506 PRB4P10163 310 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-213ENST00000492506 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
HDAC3-213ENST00000492506 S100A7L2Q5SY68 101 aa8.93□□□□□ -0.98
HDAC3-213ENST00000492506 A0A096LPF7 62 aa8.92□□□□□ -0.98
HDAC3-213ENST00000492506 MGPP08493 103 aa8.92□□□□□ -0.98
HDAC3-213ENST00000492506 ATP5EP2Q5VTU8 51 aa8.92□□□□□ -0.98
HDAC3-213ENST00000492506 VSIG2Q96IQ7 327 aa8.92□□□□□ -0.98
HDAC3-213ENST00000492506 C11orf21Q9P2W6 132 aa8.92□□□□□ -0.98
HDAC3-213ENST00000492506 HMCN2Q8NDA2 5059 aa8.92□□□□□ -0.98
HDAC3-213ENST00000492506 hADV29S1A0JD25 119 aa8.91□□□□□ -0.98
HDAC3-213ENST00000492506 I3L3M4 83 aa8.91□□□□□ -0.98
HDAC3-213ENST00000492506 DNAH10OSP0CZ25 163 aa8.91□□□□□ -0.98
HDAC3-213ENST00000492506 C14orf178Q8N769 122 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-213ENST00000492506 RPL39LQ96EH5 51 aaKnown RBP8.91□□□□□ -0.98
HDAC3-213ENST00000492506 A0A087WTM6 91 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms