RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 PACRGQ96M98 296 aaPredicted RBP9.98□□□□□ -0.81
PKP4-214ENST00000492496 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
PKP4-214ENST00000492496 RAB5BP61020 215 aa9.97□□□□□ -0.81
PKP4-214ENST00000492496 PMVKQ15126 192 aa9.97□□□□□ -0.81
PKP4-214ENST00000492496 URB1-AS1Q96HZ7 61 aa9.97□□□□□ -0.81
PKP4-214ENST00000492496 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
PKP4-214ENST00000492496 A0A096LNJ9 63 aa9.96□□□□□ -0.82
PKP4-214ENST00000492496 PRR3P79522 188 aaKnown RBP9.96□□□□□ -0.82
PKP4-214ENST00000492496 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
PKP4-214ENST00000492496 C2orf82Q6UX34 121 aa9.96□□□□□ -0.82
PKP4-214ENST00000492496 Q6ZRP5 223 aa9.96□□□□□ -0.82
PKP4-214ENST00000492496 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.82
PKP4-214ENST00000492496 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
PKP4-214ENST00000492496 IGLV5-45A0A087WSX0 123 aa9.95□□□□□ -0.82
PKP4-214ENST00000492496 CKS1BP61024 79 aa9.95□□□□□ -0.82
PKP4-214ENST00000492496 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
PKP4-214ENST00000492496 LINC00469Q8N7U9 141 aa9.95□□□□□ -0.82
PKP4-214ENST00000492496 HBDP02042 147 aa9.94□□□□□ -0.82
PKP4-214ENST00000492496 MYCBP2O75592 4640 aa9.93□□□□□ -0.82
PKP4-214ENST00000492496 NDUFC2-KCTD14E9PQ53 114 aa9.93□□□□□ -0.82
PKP4-214ENST00000492496 PDZD11Q5EBL8 140 aa9.93□□□□□ -0.82
PKP4-214ENST00000492496 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
PKP4-214ENST00000492496 CXCL5P42830 114 aa9.92□□□□□ -0.82
PKP4-214ENST00000492496 CBLN2Q8IUK8 224 aa9.92□□□□□ -0.82
PKP4-214ENST00000492496 SLC7A5P1Q8MH63 180 aa9.92□□□□□ -0.82
PKP4-214ENST00000492496 ATP5LO75964 103 aa9.91□□□□□ -0.82
PKP4-214ENST00000492496 GAGE2EQ4V326 116 aa9.91□□□□□ -0.82
PKP4-214ENST00000492496 GAGE2DQ9UEU5 116 aa9.91□□□□□ -0.82
PKP4-214ENST00000492496 F8VRH5 84 aa9.9□□□□□ -0.82
PKP4-214ENST00000492496 IGLC3P0DOY3 106 aa9.9□□□□□ -0.82
PKP4-214ENST00000492496 PMCHL1Q16048 86 aa9.9□□□□□ -0.82
PKP4-214ENST00000492496 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.82
PKP4-214ENST00000492496 PKHD1L1Q86WI1 4243 aa9.9□□□□□ -0.82
PKP4-214ENST00000492496 H3BRM9 83 aa9.89□□□□□ -0.83
PKP4-214ENST00000492496 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
PKP4-214ENST00000492496 NDUFA6P56556 154 aa9.88□□□□□ -0.83
PKP4-214ENST00000492496 PHF5AQ7RTV0 110 aaKnown RBP9.88□□□□□ -0.83
PKP4-214ENST00000492496 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
PKP4-214ENST00000492496 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
PKP4-214ENST00000492496 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
PKP4-214ENST00000492496 SPINK6Q6UWN8 80 aa9.86□□□□□ -0.83
PKP4-214ENST00000492496 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
PKP4-214ENST00000492496 SRSF9Q13242 221 aaKnown RBP eCLIP9.85□□□□□ -0.83
PKP4-214ENST00000492496 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
PKP4-214ENST00000492496 ZNF22P17026 224 aaPredicted RBP9.84□□□□□ -0.83
PKP4-214ENST00000492496 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
PKP4-214ENST00000492496 KRTAP7-1Q8IUC3 87 aa9.84□□□□□ -0.83
PKP4-214ENST00000492496 IGLV5-39A0A0G2JS06 123 aa9.83□□□□□ -0.84
PKP4-214ENST00000492496 M0QXV9 152 aa9.83□□□□□ -0.84
PKP4-214ENST00000492496 TRGC2P03986 189 aa9.83□□□□□ -0.84
PKP4-214ENST00000492496 IFI27L1Q96BM0 104 aa9.83□□□□□ -0.84
PKP4-214ENST00000492496 TRAV12-1A0A0B4J245 112 aa9.82□□□□□ -0.84
PKP4-214ENST00000492496 ODF1Q14990 250 aa9.82□□□□□ -0.84
PKP4-214ENST00000492496 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
PKP4-214ENST00000492496 HSBP1O75506 76 aa9.81□□□□□ -0.84
PKP4-214ENST00000492496 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
PKP4-214ENST00000492496 C1orf137Q5JT78 98 aa9.81□□□□□ -0.84
PKP4-214ENST00000492496 CHTOPQ9Y3Y2 248 aaKnown RBP9.81□□□□□ -0.84
PKP4-214ENST00000492496 COLCA2A8K830 154 aa9.8□□□□□ -0.84
PKP4-214ENST00000492496 TMEM170BQ5T4T1 132 aa9.8□□□□□ -0.84
PKP4-214ENST00000492496 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
PKP4-214ENST00000492496 XAGE1AQ9HD64 81 aa9.8□□□□□ -0.84
PKP4-214ENST00000492496 LRP1Q07954 4544 aaKnown RBP9.8□□□□□ -0.84
PKP4-214ENST00000492496 UBE2BP63146 152 aa9.79□□□□□ -0.84
PKP4-214ENST00000492496 LINC01600Q96MT4 127 aa9.79□□□□□ -0.84
PKP4-214ENST00000492496 LCE2AQ5TA79 106 aaPredicted RBP9.78□□□□□ -0.84
PKP4-214ENST00000492496 SERTAD4-AS1Q5TG53 156 aa9.78□□□□□ -0.84
PKP4-214ENST00000492496 KRTAP11-1Q8IUC1 163 aa9.78□□□□□ -0.84
PKP4-214ENST00000492496 FAM19A2Q8N3H0 131 aa9.78□□□□□ -0.84
PKP4-214ENST00000492496 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.84
PKP4-214ENST00000492496 IGLV7-43P04211 117 aa9.77□□□□□ -0.85
PKP4-214ENST00000492496 SFTA2Q6UW10 78 aa9.77□□□□□ -0.85
PKP4-214ENST00000492496 TP73-AS1Q9UF72 201 aa9.77□□□□□ -0.85
PKP4-214ENST00000492496 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.85
PKP4-214ENST00000492496 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
PKP4-214ENST00000492496 SERF1AO75920 110 aa9.76□□□□□ -0.85
PKP4-214ENST00000492496 LBHQ53QV2 105 aaPredicted RBP9.76□□□□□ -0.85
PKP4-214ENST00000492496 LINC00310P59036 64 aa9.75□□□□□ -0.85
PKP4-214ENST00000492496 HERC1Q15751 4861 aa9.74□□□□□ -0.85
PKP4-214ENST00000492496 TMEM223A0PJW6 202 aa9.74□□□□□ -0.85
PKP4-214ENST00000492496 LEPROTL1O95214 131 aa9.74□□□□□ -0.85
PKP4-214ENST00000492496 COX17Q14061 63 aa9.74□□□□□ -0.85
PKP4-214ENST00000492496 MRPL55Q7Z7F7 128 aaKnown RBP9.73□□□□□ -0.85
PKP4-214ENST00000492496 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
PKP4-214ENST00000492496 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
PKP4-214ENST00000492496 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
PKP4-214ENST00000492496 NUPR1O60356 82 aa9.72□□□□□ -0.85
PKP4-214ENST00000492496 PFN2P35080 140 aa9.72□□□□□ -0.85
PKP4-214ENST00000492496 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
PKP4-214ENST00000492496 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.86
PKP4-214ENST00000492496 H0Y9J4 135 aa9.69□□□□□ -0.86
PKP4-214ENST00000492496 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
PKP4-214ENST00000492496 KRTAP10-8P60410 259 aa9.69□□□□□ -0.86
PKP4-214ENST00000492496 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
PKP4-214ENST00000492496 H0Y8G0 127 aa9.68□□□□□ -0.86
PKP4-214ENST00000492496 SCO1O75880 301 aa9.68□□□□□ -0.86
PKP4-214ENST00000492496 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
PKP4-214ENST00000492496 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
PKP4-214ENST00000492496 FABP4P15090 132 aa9.67□□□□□ -0.86
PKP4-214ENST00000492496 PLNP26678 52 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms