RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 CST9LQ9H4G1 147 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
SS18L1-205ENST00000492466 C6orf226Q5I0X4 101 aa9.3□□□□□ -0.92
SS18L1-205ENST00000492466 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
SS18L1-205ENST00000492466 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
SS18L1-205ENST00000492466 A0A096LNJ9 63 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 H3BRM9 83 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 PTTG1IPP53801 180 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 TNXBP22105 4242 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 RNF151Q2KHN1 245 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 Q8IZM0 81 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 PLAC8Q9NZF1 115 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 SPINK8P0C7L1 97 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 C10orf25Q5T742 122 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 SCO1O75880 301 aa9.26□□□□□ -0.93
SS18L1-205ENST00000492466 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 MT1HL1P0DM35 61 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 CXCL5P42830 114 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 GAGE2EQ4V326 116 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 GAGE2DQ9UEU5 116 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 LRP2P98164 4655 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 COLCA2A8K830 154 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 H0Y8G0 127 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 IFI27L1Q96BM0 104 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 IGLV5-45A0A087WSX0 123 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 F8VRH5 84 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 SERF1AO75920 110 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
SS18L1-205ENST00000492466 PLA2G2DQ9UNK4 145 aa9.22□□□□□ -0.93
SS18L1-205ENST00000492466 NDUFC2-KCTD14E9PQ53 114 aa9.21□□□□□ -0.94
SS18L1-205ENST00000492466 TLX1NBP0CAT3 122 aa9.21□□□□□ -0.94
SS18L1-205ENST00000492466 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.94
SS18L1-205ENST00000492466 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.94
SS18L1-205ENST00000492466 Q6ZRP5 223 aa9.21□□□□□ -0.94
SS18L1-205ENST00000492466 FAM19A5Q7Z5A7 132 aaPredicted RBP9.21□□□□□ -0.94
SS18L1-205ENST00000492466 LEPROTL1O95214 131 aa9.2□□□□□ -0.94
SS18L1-205ENST00000492466 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
SS18L1-205ENST00000492466 TRAV12-1A0A0B4J245 112 aa9.18□□□□□ -0.94
SS18L1-205ENST00000492466 FABP4P15090 132 aa9.18□□□□□ -0.94
SS18L1-205ENST00000492466 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
SS18L1-205ENST00000492466 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
SS18L1-205ENST00000492466 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
SS18L1-205ENST00000492466 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
SS18L1-205ENST00000492466 M0QXV9 152 aa9.16□□□□□ -0.94
SS18L1-205ENST00000492466 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
SS18L1-205ENST00000492466 LINC00310P59036 64 aa9.15□□□□□ -0.94
SS18L1-205ENST00000492466 UBE2BP63146 152 aa9.15□□□□□ -0.94
SS18L1-205ENST00000492466 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
SS18L1-205ENST00000492466 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.94
SS18L1-205ENST00000492466 IGLV5-39A0A0G2JS06 123 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
SS18L1-205ENST00000492466 NUPR1O60356 82 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 S100A1P23297 94 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 PFN2P35080 140 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
SS18L1-205ENST00000492466 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 PLNP26678 52 aa9.11□□□□□ -0.95
SS18L1-205ENST00000492466 ODF1Q14990 250 aa9.11□□□□□ -0.95
SS18L1-205ENST00000492466 ZNF625Q96I27 306 aaPredicted RBP9.11□□□□□ -0.95
SS18L1-205ENST00000492466 TMEM223A0PJW6 202 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 HERVK_113P61574 105 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 DPM2O94777 84 aa9.09□□□□□ -0.95
SS18L1-205ENST00000492466 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
SS18L1-205ENST00000492466 PMCHL2Q9BQD1 86 aa9.09□□□□□ -0.95
SS18L1-205ENST00000492466 NKAPP1Q8N9T2 125 aa9.08□□□□□ -0.96
SS18L1-205ENST00000492466 PSORS1C2Q9UIG4 136 aa9.08□□□□□ -0.96
SS18L1-205ENST00000492466 IGKCP01834 107 aa9.07□□□□□ -0.96
SS18L1-205ENST00000492466 LBHQ53QV2 105 aaPredicted RBP9.07□□□□□ -0.96
SS18L1-205ENST00000492466 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
SS18L1-205ENST00000492466 LINC00158P58513 81 aa9.06□□□□□ -0.96
SS18L1-205ENST00000492466 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
SS18L1-205ENST00000492466 COX17Q14061 63 aa9.05□□□□□ -0.96
SS18L1-205ENST00000492466 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
SS18L1-205ENST00000492466 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
SS18L1-205ENST00000492466 PLEKHB2Q96CS7 222 aa9.04□□□□□ -0.96
SS18L1-205ENST00000492466 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms