RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 LPAP08519 4548 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 CNOT1A5YKK6 2376 aaKnown RBP-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 CSPG4Q6UVK1 2322 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 STAB2Q8WWQ8 2551 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 PDZD2O15018 2839 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 TRBV7-7A0A0K0K1E9 115 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 LINC00959A0A1B0GUT2 108 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 D6R8Y8 96 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 LEPROTL1O95214 131 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 CYB5AP00167 134 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 MUSTN1Q8IVN3 82 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 SPRR4Q96PI1 79 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 MUC2Q02817 5179 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 MAGI1Q96QZ7 1491 aaPredicted RBP-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 MYO7BQ6PIF6 2116 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 LAMC1P11047 1609 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 PLXNB2O15031 1838 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 ZNF236Q9UL36 1845 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 MAPKBP1O60336 1514 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 ATOX1O00244 68 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 SPRR2BP35325 72 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 H1FX-AS1Q4G0G2 97 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 DEFB107AQ8IZN7 70 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 C9orf62Q8N4C0 152 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 PMCHL2Q9BQD1 86 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 HIGD1BQ9P298 99 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 HMCN2Q8NDA2 5059 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 VWFP04275 2813 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 NF1P21359 2839 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 KMT2AQ03164 3969 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 KDM3BQ7LBC6 1761 aa-0.06□□□□□ -2.42
HMGB1P30-201ENST00000492455 KIF21AQ7Z4S6 1674 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 QRICH2Q9H0J4 1663 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 MYOM2P54296 1465 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 IQSEC2Q5JU85 1478 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 TRBV25-1A0A075B6N4 114 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 A0A087WVE0 104 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 ATP6V1G2-DDX39BF2Z307 99 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 PRM1P04553 51 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 S100PP25815 95 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 FAUP35544 74 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 HSD52Q0P140 79 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 ETDBQ3ZM63 59 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 PAPPAQ13219 1627 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 DNAJC13O75165 2243 aa-0.07□□□□□ -2.42
HMGB1P30-201ENST00000492455 SBF2Q86WG5 1849 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 DOCK2Q92608 1830 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 MYCBP2O75592 4640 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 C1orf167Q5SNV9 1468 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 NLRP1Q9C000 1473 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 hADV29S1A0JD25 119 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 S100A10P60903 97 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 DEFB112Q30KQ8 113 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 TRGV9Q99603 122 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 C2orf88Q9BSF0 95 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 EHBP1L1Q8N3D4 1523 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 ABCC2Q92887 1545 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 LRP2P98164 4655 aa-0.08□□□□□ -2.42
HMGB1P30-201ENST00000492455 EIF4G3O43432 1585 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 NEBP20929 6669 aa-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 PEA15Q15121 130 aa-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 SERP2Q8N6R1 65 aa-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 LCN9Q8WX39 176 aa-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 MRPL34Q9BQ48 92 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 DPY30Q9C005 99 aa-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 UBE2D4Q9Y2X8 147 aa-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 RIMS1Q86UR5 1692 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 ARHGAP5Q13017 1502 aa-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P30-201ENST00000492455 KMT2CQ8NEZ4 4911 aaKnown RBP-0.1□□□□□ -2.42
HMGB1P30-201ENST00000492455 KDM5AP29375 1690 aaKnown RBP-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 ROBO1Q9Y6N7 1651 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 TCHHQ07283 1943 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 A0A1B0GUT8 65 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 LINC00587B1AMM8 73 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 PLGLAQ15195 96 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 KRTAP19-7Q3SYF9 63 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 COX6B2Q6YFQ2 88 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 COL6A3P12111 3177 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 A0A0G2JMZ2 1700 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 PLEKHH2Q8IVE3 1493 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 TSC2P49815 1807 aa-0.1□□□□□ -2.43
HMGB1P30-201ENST00000492455 TNXBP22105 4242 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 RYR1P21817 5038 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 USH2AO75445 5202 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 EDC4Q6P2E9 1401 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 HMGXB3Q12766 1538 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 TULP4Q9NRJ4 1543 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 ALMS1Q8TCU4 4167 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 GYPAP02724 150 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 ASIPP42127 132 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 WFDC13Q8IUB5 93 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 ACBD7Q8N6N7 88 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 GAFA1Q96PS6 74 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 Q9H521 79 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 NALCNQ8IZF0 1738 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 ADGRL2O95490 1459 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 MLH3Q9UHC1 1453 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms