RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LINC01546A6NGU7 62 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 SCO1O75880 301 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 GAGE2EQ4V326 116 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 ZC2HC1BQ5TFG8 222 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 Q6ZN92 141 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 CBLN2Q8IUK8 224 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 Q8IZM0 81 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 VCX2Q9H322 139 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 NXT2Q9NPJ8 142 aaKnown RBP5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 GAGE2DQ9UEU5 116 aa5.05□□□□□ -1.6
SMARCB1-207ENST00000491967 IGLV1-50A0A075B6I6 118 aa5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 S100A1P23297 94 aa5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 FAM19A5Q7Z5A7 132 aaPredicted RBP5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 PRR26Q8N8Z3 221 aa5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 TOMM6Q96B49 74 aa5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 TIMM17AQ99595 171 aa5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 C2orf88Q9BSF0 95 aa5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 SMCO4Q9NRQ5 59 aa5.04□□□□□ -1.6
SMARCB1-207ENST00000491967 TRAV9-1A0A075B6T8 112 aa5.03□□□□□ -1.6
SMARCB1-207ENST00000491967 IGLV5-45A0A087WSX0 123 aa5.03□□□□□ -1.6
SMARCB1-207ENST00000491967 M0QXV9 152 aa5.03□□□□□ -1.6
SMARCB1-207ENST00000491967 G0S2P27469 103 aa5.03□□□□□ -1.6
SMARCB1-207ENST00000491967 HERVK_113P63121 156 aa5.03□□□□□ -1.6
SMARCB1-207ENST00000491967 SEC11AP67812 179 aa5.03□□□□□ -1.6
SMARCB1-207ENST00000491967 PACRGQ96M98 296 aaPredicted RBP5.03□□□□□ -1.6
SMARCB1-207ENST00000491967 KIAA1644Q3SXP7 199 aa5.02□□□□□ -1.61
SMARCB1-207ENST00000491967 C6orf226Q5I0X4 101 aa5.02□□□□□ -1.61
SMARCB1-207ENST00000491967 PAPPA-AS1Q5QFB9 102 aa5.02□□□□□ -1.61
SMARCB1-207ENST00000491967 ERASQ7Z444 233 aa5.02□□□□□ -1.61
SMARCB1-207ENST00000491967 TP73-AS1Q9UF72 201 aa5.02□□□□□ -1.61
SMARCB1-207ENST00000491967 CDKN2A-AS1Q9UH64 79 aa5.02□□□□□ -1.61
SMARCB1-207ENST00000491967 F8VRH5 84 aa5.01□□□□□ -1.61
SMARCB1-207ENST00000491967 ZNF861PO60384 105 aa5.01□□□□□ -1.61
SMARCB1-207ENST00000491967 CKS1BP61024 79 aa5.01□□□□□ -1.61
SMARCB1-207ENST00000491967 YPEL4Q96NS1 127 aa5.01□□□□□ -1.61
SMARCB1-207ENST00000491967 ALKBH7Q9BT30 221 aaPredicted RBP5.01□□□□□ -1.61
SMARCB1-207ENST00000491967 C22orf24Q9Y442 160 aa5.01□□□□□ -1.61
SMARCB1-207ENST00000491967 TRAPPC1Q9Y5R8 145 aa5.01□□□□□ -1.61
SMARCB1-207ENST00000491967 TINCRA0A1B0GVN0 87 aa5□□□□□ -1.61
SMARCB1-207ENST00000491967 LINC01549A6NIU2 74 aa5□□□□□ -1.61
SMARCB1-207ENST00000491967 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
SMARCB1-207ENST00000491967 PRSS2P07478 247 aa5□□□□□ -1.61
SMARCB1-207ENST00000491967 FABP9Q0Z7S8 132 aa5□□□□□ -1.61
SMARCB1-207ENST00000491967 COX19Q49B96 90 aa5□□□□□ -1.61
SMARCB1-207ENST00000491967 GNB1LQ9BYB4 327 aa5□□□□□ -1.61
SMARCB1-207ENST00000491967 MRPL18Q9H0U6 180 aaKnown RBP5□□□□□ -1.61
SMARCB1-207ENST00000491967 COLCA2A8K830 154 aa4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 NUPR1O60356 82 aa4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 CXCL5P42830 114 aa4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 UBE2BP63146 152 aa4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 LBHQ53QV2 105 aaPredicted RBP4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 PDZD11Q5EBL8 140 aa4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 CST9LQ9H4G1 147 aa4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 GEMIN7Q9H840 131 aaKnown RBP4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 TOMM7Q9P0U1 55 aa4.99□□□□□ -1.61
SMARCB1-207ENST00000491967 IGLV5-37A0A075B6J1 123 aa4.98□□□□□ -1.61
SMARCB1-207ENST00000491967 RPL13AP40429 203 aaKnown RBP4.98□□□□□ -1.61
SMARCB1-207ENST00000491967 SCGB3A1Q96QR1 104 aa4.98□□□□□ -1.61
SMARCB1-207ENST00000491967 XAGE1AQ9HD64 81 aa4.98□□□□□ -1.61
SMARCB1-207ENST00000491967 LPAP08519 4548 aa4.98□□□□□ -1.61
SMARCB1-207ENST00000491967 MRPL55Q7Z7F7 128 aaKnown RBP4.97□□□□□ -1.61
SMARCB1-207ENST00000491967 KRTAP13-1Q8IUC0 172 aa4.97□□□□□ -1.61
SMARCB1-207ENST00000491967 LINC00469Q8N7U9 141 aa4.97□□□□□ -1.61
SMARCB1-207ENST00000491967 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
SMARCB1-207ENST00000491967 BCE1O60756 84 aa4.96□□□□□ -1.62
SMARCB1-207ENST00000491967 TRGC2P03986 189 aa4.96□□□□□ -1.62
SMARCB1-207ENST00000491967 PMVKQ15126 192 aa4.96□□□□□ -1.62
SMARCB1-207ENST00000491967 COX7B2Q8TF08 81 aa4.96□□□□□ -1.62
SMARCB1-207ENST00000491967 A0A096LNJ9 63 aa4.95□□□□□ -1.62
SMARCB1-207ENST00000491967 LINC00167Q96N53 147 aa4.95□□□□□ -1.62
SMARCB1-207ENST00000491967 A0A087X002 238 aa4.94□□□□□ -1.62
SMARCB1-207ENST00000491967 IGLC3P0DOY3 106 aa4.94□□□□□ -1.62
SMARCB1-207ENST00000491967 RPL28P46779 137 aaKnown RBP4.94□□□□□ -1.62
SMARCB1-207ENST00000491967 URB1-AS1Q96HZ7 61 aa4.94□□□□□ -1.62
SMARCB1-207ENST00000491967 SPINK8P0C7L1 97 aa4.93□□□□□ -1.62
SMARCB1-207ENST00000491967 RPL37AP8A6NKH3 93 aa4.92□□□□□ -1.62
SMARCB1-207ENST00000491967 H3BRM9 83 aa4.92□□□□□ -1.62
SMARCB1-207ENST00000491967 FA2HQ7L5A8 372 aa4.92□□□□□ -1.62
SMARCB1-207ENST00000491967 C18orf32Q8TCD1 76 aa4.92□□□□□ -1.62
SMARCB1-207ENST00000491967 ATP5LO75964 103 aa4.91□□□□□ -1.62
SMARCB1-207ENST00000491967 LINC00614P0C842 121 aa4.91□□□□□ -1.62
SMARCB1-207ENST00000491967 CRYGAP11844 174 aa4.91□□□□□ -1.62
SMARCB1-207ENST00000491967 VPREB1P12018 145 aa4.91□□□□□ -1.62
SMARCB1-207ENST00000491967 ZNF22P17026 224 aaPredicted RBP4.91□□□□□ -1.62
SMARCB1-207ENST00000491967 COX17Q14061 63 aa4.91□□□□□ -1.62
SMARCB1-207ENST00000491967 FAM229BQ4G0N7 80 aa4.91□□□□□ -1.62
SMARCB1-207ENST00000491967 RAB5BP61020 215 aa4.9□□□□□ -1.63
SMARCB1-207ENST00000491967 CTAG1AP78358 180 aa4.9□□□□□ -1.63
SMARCB1-207ENST00000491967 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
SMARCB1-207ENST00000491967 BAGE3Q86Y29 109 aa4.9□□□□□ -1.63
SMARCB1-207ENST00000491967 ZNF625Q96I27 306 aaPredicted RBP4.9□□□□□ -1.63
SMARCB1-207ENST00000491967 SND1-IT1Q9HBX3 110 aa4.9□□□□□ -1.63
SMARCB1-207ENST00000491967 MUC2Q02817 5179 aa4.89□□□□□ -1.63
SMARCB1-207ENST00000491967 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
SMARCB1-207ENST00000491967 PMCHL1Q16048 86 aa4.89□□□□□ -1.63
SMARCB1-207ENST00000491967 PRR4Q16378 134 aa4.89□□□□□ -1.63
SMARCB1-207ENST00000491967 Q8NDZ9 215 aa4.89□□□□□ -1.63
SMARCB1-207ENST00000491967 ERG28Q9UKR5 140 aa4.89□□□□□ -1.63
SMARCB1-207ENST00000491967 HIST1H2BKO60814 126 aa4.88□□□□□ -1.63
SMARCB1-207ENST00000491967 HBDP02042 147 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms