RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 Q6ZTI0 123 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 AKAP13Q12802 2813 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 MYO9AB2RTY4 2548 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 SPTBN1Q01082 2364 aaKnown RBP4.5□□□□□ -1.69
CCDC6-202ENST00000491922 IGHV3OR16-9A0A0B4J2B5 98 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 IGHV4-38-2P0DP08 117 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 MIFP14174 115 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 HAMPP81172 84 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 CD164Q04900 197 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 Q6ZVQ6 151 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 C11orf44Q8N8P7 122 aa4.5□□□□□ -1.69
CCDC6-202ENST00000491922 A0A096LNT2 108 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 TRGV1A0A0A0MS02 117 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 TRBV7-4A0A0J9YYF1 115 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 PDE6GP18545 87 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 NANOS2P60321 138 aaKnown RBP4.49□□□□□ -1.69
CCDC6-202ENST00000491922 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 ERC2-IT1O76042 136 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 C6orf223Q8N319 242 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 COL6A6A6NMZ7 2263 aa4.49□□□□□ -1.69
CCDC6-202ENST00000491922 H3BQ85 93 aa4.48□□□□□ -1.69
CCDC6-202ENST00000491922 RNASE1P07998 156 aaKnown RBP4.48□□□□□ -1.69
CCDC6-202ENST00000491922 ADORA2A-AS1P86434 159 aa4.48□□□□□ -1.69
CCDC6-202ENST00000491922 C1orf158Q8N1D5 194 aa4.48□□□□□ -1.69
CCDC6-202ENST00000491922 A0A1W2PPR1 153 aa4.48□□□□□ -1.69
CCDC6-202ENST00000491922 Q8N3U1 123 aa4.48□□□□□ -1.69
CCDC6-202ENST00000491922 IGKV3OR2-268A0A0C4DH90 116 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 C9orf66Q5T8R8 295 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 TM2D3Q9BRN9 247 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 MAP6D1Q9H9H5 199 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 LAMTOR3Q9UHA4 124 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 ACACAQ13085 2346 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 NREPQ16612 68 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 C10orf99Q6UWK7 81 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 LINC00575Q6W349 94 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 SORL1Q92673 2214 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 CFAP46Q8IYW2 2715 aa4.47□□□□□ -1.69
CCDC6-202ENST00000491922 STHQ8IWL8 128 aa4.46□□□□□ -1.69
CCDC6-202ENST00000491922 Q8IZM0 81 aa4.46□□□□□ -1.69
CCDC6-202ENST00000491922 UBE2E2Q96LR5 201 aa4.46□□□□□ -1.69
CCDC6-202ENST00000491922 BSNQ9UPA5 3926 aa4.46□□□□□ -1.7
CCDC6-202ENST00000491922 ABCA2Q9BZC7 2435 aa4.46□□□□□ -1.7
CCDC6-202ENST00000491922 TEX15Q9BXT5 2789 aa4.46□□□□□ -1.7
CCDC6-202ENST00000491922 C11orf68Q9H3H3 251 aaKnown RBP4.46□□□□□ -1.7
CCDC6-202ENST00000491922 DOPEY1Q5JWR5 2465 aa4.46□□□□□ -1.7
CCDC6-202ENST00000491922 IGLV4-60A0A075B6I1 120 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 COX17Q14061 63 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 ESRGQ1W209 222 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 C6orf99Q4VX62 202 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 M0R2N4 97 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 FAM229BQ4G0N7 80 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 DYNLRB2Q8TF09 96 aa4.45□□□□□ -1.7
CCDC6-202ENST00000491922 LINC00959A0A1B0GUT2 108 aa4.44□□□□□ -1.7
CCDC6-202ENST00000491922 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
CCDC6-202ENST00000491922 TRBV6-8A0A0A6YYG3 113 aa4.44□□□□□ -1.7
CCDC6-202ENST00000491922 IGHV4-61A0A0C4DH41 118 aa4.44□□□□□ -1.7
CCDC6-202ENST00000491922 PLAC8L1A1L4L8 177 aa4.44□□□□□ -1.7
CCDC6-202ENST00000491922 BPY2O14599 106 aa4.44□□□□□ -1.7
CCDC6-202ENST00000491922 PRYO14603 147 aa4.44□□□□□ -1.7
CCDC6-202ENST00000491922 ATMQ13315 3056 aa4.44□□□□□ -1.7
CCDC6-202ENST00000491922 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.7
CCDC6-202ENST00000491922 SLURP1P55000 103 aa4.43□□□□□ -1.7
CCDC6-202ENST00000491922 PRR15Q8IV56 129 aa4.43□□□□□ -1.7
CCDC6-202ENST00000491922 MUC7Q8TAX7 377 aa4.43□□□□□ -1.7
CCDC6-202ENST00000491922 Q6ZRU5 148 aa4.43□□□□□ -1.7
CCDC6-202ENST00000491922 SVEP1Q4LDE5 3571 aa4.43□□□□□ -1.7
CCDC6-202ENST00000491922 LAMA5O15230 3695 aa4.43□□□□□ -1.7
CCDC6-202ENST00000491922 SPTAN1Q13813 2472 aaKnown RBP4.43□□□□□ -1.7
CCDC6-202ENST00000491922 LOC100131303A0A0U1RQF7 123 aa4.42□□□□□ -1.7
CCDC6-202ENST00000491922 IGHV4-59P01825 116 aa4.42□□□□□ -1.7
CCDC6-202ENST00000491922 GNLYP22749 145 aa4.42□□□□□ -1.7
CCDC6-202ENST00000491922 SPATA3Q8NHX4 192 aa4.42□□□□□ -1.7
CCDC6-202ENST00000491922 MSMBP08118 114 aa4.42□□□□□ -1.7
CCDC6-202ENST00000491922 NOP10Q9NPE3 64 aaKnown RBP4.42□□□□□ -1.7
CCDC6-202ENST00000491922 C2CD3Q4AC94 2353 aa4.42□□□□□ -1.7
CCDC6-202ENST00000491922 RELNP78509 3460 aa4.42□□□□□ -1.7
CCDC6-202ENST00000491922 ABCA12Q86UK0 2595 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 ZFHX3Q15911 3703 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 UBR5O95071 2799 aaPredicted RBP4.41□□□□□ -1.7
CCDC6-202ENST00000491922 TRGV2A0A075B6R0 118 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 TRGV4A0A0C4DH28 118 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 IGHV4-28A0A0C4DH34 117 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 Q6ZQY7 126 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 Q6ZTC4 211 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 SCXQ7RTU7 201 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.41□□□□□ -1.7
CCDC6-202ENST00000491922 IGHV4-31P0DP07 118 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 DEFB114Q30KQ6 69 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 DEFB112Q30KQ8 113 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 C16orf74Q96GX8 76 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
CCDC6-202ENST00000491922 TLN1Q9Y490 2541 aaKnown RBP4.4□□□□□ -1.7
CCDC6-202ENST00000491922 DEFB136Q30KP8 78 aa4.4□□□□□ -1.7
CCDC6-202ENST00000491922 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.7
CCDC6-202ENST00000491922 LCE2BO14633 110 aa4.4□□□□□ -1.71
CCDC6-202ENST00000491922 ODF3L2Q3SX64 289 aa4.4□□□□□ -1.71
CCDC6-202ENST00000491922 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.4□□□□□ -1.71
CCDC6-202ENST00000491922 FBN2P35556 2912 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms