RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PCP2Q8IVA1 136 aa14.23□□□□□ -0.13
VCPKMT-204ENST00000491402 CXCL5P42830 114 aa14.22□□□□□ -0.13
VCPKMT-204ENST00000491402 NDUFA12Q9UI09 145 aa14.22□□□□□ -0.13
VCPKMT-204ENST00000491402 ZNF625Q96I27 306 aaPredicted RBP14.22□□□□□ -0.13
VCPKMT-204ENST00000491402 C2orf48Q96LS8 159 aa14.22□□□□□ -0.13
VCPKMT-204ENST00000491402 FAT2Q9NYQ8 4349 aa14.22□□□□□ -0.13
VCPKMT-204ENST00000491402 Q8N814 137 aa14.21□□□□□ -0.13
VCPKMT-204ENST00000491402 CAMK2N2Q96S95 79 aa14.21□□□□□ -0.13
VCPKMT-204ENST00000491402 LINC00518Q8N0U6 118 aa14.2□□□□□ -0.14
VCPKMT-204ENST00000491402 NDUFA1O15239 70 aa14.19□□□□□ -0.14
VCPKMT-204ENST00000491402 ZNF815PA8K554 130 aa14.19□□□□□ -0.14
VCPKMT-204ENST00000491402 SLPIP03973 132 aa14.19□□□□□ -0.14
VCPKMT-204ENST00000491402 C10orf25Q5T742 122 aa14.19□□□□□ -0.14
VCPKMT-204ENST00000491402 SFTA2Q6UW10 78 aa14.19□□□□□ -0.14
VCPKMT-204ENST00000491402 UNQ6190/PRO20217Q6UXQ8 127 aa14.19□□□□□ -0.14
VCPKMT-204ENST00000491402 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.18□□□□□ -0.14
VCPKMT-204ENST00000491402 MYMXA0A1B0GTQ4 84 aa14.18□□□□□ -0.14
VCPKMT-204ENST00000491402 F8WDY8 70 aa14.18□□□□□ -0.14
VCPKMT-204ENST00000491402 COX8AP10176 69 aa14.18□□□□□ -0.14
VCPKMT-204ENST00000491402 C14orf144Q96I85 54 aa14.18□□□□□ -0.14
VCPKMT-204ENST00000491402 SYCNQ0VAF6 134 aa14.17□□□□□ -0.14
VCPKMT-204ENST00000491402 Q6ZRU5 148 aa14.17□□□□□ -0.14
VCPKMT-204ENST00000491402 TP73-AS1Q9UF72 201 aa14.17□□□□□ -0.14
VCPKMT-204ENST00000491402 EREGO14944 169 aa14.14□□□□□ -0.15
VCPKMT-204ENST00000491402 CNBPP62633 177 aaKnown RBP14.14□□□□□ -0.15
VCPKMT-204ENST00000491402 HERV-K104P63124 156 aa14.14□□□□□ -0.15
VCPKMT-204ENST00000491402 BOD1L2Q8IYS8 172 aa14.14□□□□□ -0.15
VCPKMT-204ENST00000491402 CARD19Q96LW7 228 aa14.14□□□□□ -0.15
VCPKMT-204ENST00000491402 C6orf48Q9UBA6 75 aa14.14□□□□□ -0.15
VCPKMT-204ENST00000491402 PKD1P98161 4303 aa14.13□□□□□ -0.15
VCPKMT-204ENST00000491402 TRBV30A0A0K0K1B3 111 aa14.12□□□□□ -0.15
VCPKMT-204ENST00000491402 A0A0J9YXY3 114 aa14.11□□□□□ -0.15
VCPKMT-204ENST00000491402 DLEU1O43261 78 aa14.11□□□□□ -0.15
VCPKMT-204ENST00000491402 C9orf116Q5BN46 136 aaPredicted RBP14.11□□□□□ -0.15
VCPKMT-204ENST00000491402 SLC25A34Q6PIV7 304 aa14.11□□□□□ -0.15
VCPKMT-204ENST00000491402 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.11□□□□□ -0.15
VCPKMT-204ENST00000491402 SCGB1D4Q6XE38 83 aa14.11□□□□□ -0.15
VCPKMT-204ENST00000491402 A0A1B0GVY2 172 aa14.1□□□□□ -0.15
VCPKMT-204ENST00000491402 PRO1933Q9H354 126 aa14.09□□□□□ -0.15
VCPKMT-204ENST00000491402 DNAH11Q96DT5 4516 aa14.09□□□□□ -0.15
VCPKMT-204ENST00000491402 MEIG1Q5JSS6 88 aa14.09□□□□□ -0.15
VCPKMT-204ENST00000491402 ERG28Q9UKR5 140 aa14.09□□□□□ -0.15
VCPKMT-204ENST00000491402 HECTD4Q9Y4D8 3996 aa14.08□□□□□ -0.16
VCPKMT-204ENST00000491402 FUSP35637 526 aaKnown RBP eCLIP14.07□□□□□ -0.16
VCPKMT-204ENST00000491402 RNF151Q2KHN1 245 aa14.07□□□□□ -0.16
VCPKMT-204ENST00000491402 PFN2P35080 140 aa14.06□□□□□ -0.16
VCPKMT-204ENST00000491402 UQCR10Q9UDW1 63 aa14.06□□□□□ -0.16
VCPKMT-204ENST00000491402 EPPK1P58107 5090 aaKnown RBP14.06□□□□□ -0.16
VCPKMT-204ENST00000491402 A0A0U1RRA0 63 aa14.05□□□□□ -0.16
VCPKMT-204ENST00000491402 LINC00587B1AMM8 73 aa14.05□□□□□ -0.16
VCPKMT-204ENST00000491402 SMIM13P0DJ93 91 aa14.05□□□□□ -0.16
VCPKMT-204ENST00000491402 KRTAP10-2P60368 255 aa14.05□□□□□ -0.16
VCPKMT-204ENST00000491402 COX17Q14061 63 aa14.05□□□□□ -0.16
VCPKMT-204ENST00000491402 C9orf163Q8N9P6 203 aa14.05□□□□□ -0.16
VCPKMT-204ENST00000491402 CIRBPQ14011 172 aaKnown RBP14.04□□□□□ -0.16
VCPKMT-204ENST00000491402 LITAFQ99732 161 aa14.04□□□□□ -0.16
VCPKMT-204ENST00000491402 IGLV5-52A0A0A0MRZ9 124 aa14.03□□□□□ -0.16
VCPKMT-204ENST00000491402 TSTD3H0UI37 97 aa14.03□□□□□ -0.16
VCPKMT-204ENST00000491402 TIMM17BO60830 172 aa14.03□□□□□ -0.16
VCPKMT-204ENST00000491402 LINC00158P58513 81 aa14.03□□□□□ -0.16
VCPKMT-204ENST00000491402 NDUFC2-KCTD14E9PQ53 114 aa14.02□□□□□ -0.16
VCPKMT-204ENST00000491402 LINC01620Q4KN68 170 aa14.02□□□□□ -0.16
VCPKMT-204ENST00000491402 C2orf91Q6ZV80 131 aa14.02□□□□□ -0.16
VCPKMT-204ENST00000491402 MIEN1Q9BRT3 115 aa14.02□□□□□ -0.16
VCPKMT-204ENST00000491402 ADAMTSL4-AS1Q5T5F5 129 aa14.01□□□□□ -0.17
VCPKMT-204ENST00000491402 TMEM238C9JI98 176 aa14.01□□□□□ -0.17
VCPKMT-204ENST00000491402 TLX1NBP0CAT3 122 aa14.01□□□□□ -0.17
VCPKMT-204ENST00000491402 DAND5Q8N907 189 aa14.01□□□□□ -0.17
VCPKMT-204ENST00000491402 Q6ZRP5 223 aa14□□□□□ -0.17
VCPKMT-204ENST00000491402 MIR7-3HGQ8N6C7 128 aa14□□□□□ -0.17
VCPKMT-204ENST00000491402 PGPEP1Q9NXJ5 209 aa13.99□□□□□ -0.17
VCPKMT-204ENST00000491402 HIGD1BQ9P298 99 aa13.99□□□□□ -0.17
VCPKMT-204ENST00000491402 RPL18AQ02543 176 aaKnown RBP13.99□□□□□ -0.17
VCPKMT-204ENST00000491402 PKHD1P08F94 4074 aa13.98□□□□□ -0.17
VCPKMT-204ENST00000491402 LOC107984640A0A0U1RRK4 108 aa13.98□□□□□ -0.17
VCPKMT-204ENST00000491402 SPANXDQ9BXN6 97 aa13.96□□□□□ -0.17
VCPKMT-204ENST00000491402 SPANXB1Q9NS25 103 aaPredicted RBP13.96□□□□□ -0.17
VCPKMT-204ENST00000491402 SPANXCQ9NY87 97 aa13.96□□□□□ -0.17
VCPKMT-204ENST00000491402 DNAH5Q8TE73 4624 aa13.96□□□□□ -0.17
VCPKMT-204ENST00000491402 HNRNPA3P51991 378 aaKnown RBP13.96□□□□□ -0.18
VCPKMT-204ENST00000491402 GAGE2EQ4V326 116 aa13.96□□□□□ -0.18
VCPKMT-204ENST00000491402 SDIM1Q6ZPB5 146 aa13.96□□□□□ -0.18
VCPKMT-204ENST00000491402 GAGE2DQ9UEU5 116 aa13.96□□□□□ -0.18
VCPKMT-204ENST00000491402 SND1-IT1Q9HBX3 110 aa13.95□□□□□ -0.18
VCPKMT-204ENST00000491402 SRSF9Q13242 221 aaKnown RBP eCLIP13.94□□□□□ -0.18
VCPKMT-204ENST00000491402 PKIGQ9Y2B9 76 aa13.94□□□□□ -0.18
VCPKMT-204ENST00000491402 GAGE2BQ13066 116 aa13.94□□□□□ -0.18
VCPKMT-204ENST00000491402 A0A096LNI7 61 aa13.93□□□□□ -0.18
VCPKMT-204ENST00000491402 C16orf90A8MZG2 172 aa13.93□□□□□ -0.18
VCPKMT-204ENST00000491402 NPC2P61916 151 aa13.93□□□□□ -0.18
VCPKMT-204ENST00000491402 Q6ZVH6 145 aa13.93□□□□□ -0.18
VCPKMT-204ENST00000491402 XAGE1AQ9HD64 81 aa13.93□□□□□ -0.18
VCPKMT-204ENST00000491402 PTTG1IPP53801 180 aa13.92□□□□□ -0.18
VCPKMT-204ENST00000491402 HIST1H4GQ99525 98 aa13.91□□□□□ -0.18
VCPKMT-204ENST00000491402 IGKV2-24A0A0C4DH68 120 aa13.91□□□□□ -0.18
VCPKMT-204ENST00000491402 EIF4EBP3O60516 100 aaPredicted RBP13.91□□□□□ -0.18
VCPKMT-204ENST00000491402 GCSHP23434 173 aa13.91□□□□□ -0.18
VCPKMT-204ENST00000491402 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
VCPKMT-204ENST00000491402 SOSTDC1Q6X4U4 206 aa13.9□□□□□ -0.18
VCPKMT-204ENST00000491402 C9orf129Q5T035 196 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms