RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ATOH7Q8N100 152 aa6.96□□□□□ -1.3
CACNA1C-227ENST00000491104 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
CACNA1C-227ENST00000491104 NDUFA1O15239 70 aa6.95□□□□□ -1.3
CACNA1C-227ENST00000491104 GCSHP23434 173 aa6.95□□□□□ -1.3
CACNA1C-227ENST00000491104 C6orf226Q5I0X4 101 aa6.95□□□□□ -1.3
CACNA1C-227ENST00000491104 C9orf163Q8N9P6 203 aa6.95□□□□□ -1.3
CACNA1C-227ENST00000491104 C6orf48Q9UBA6 75 aa6.95□□□□□ -1.3
CACNA1C-227ENST00000491104 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.94□□□□□ -1.3
CACNA1C-227ENST00000491104 C20orf202A1L168 122 aa6.94□□□□□ -1.3
CACNA1C-227ENST00000491104 PKHD1P08F94 4074 aa6.93□□□□□ -1.3
CACNA1C-227ENST00000491104 TSPEAR-AS2P59090 65 aa6.93□□□□□ -1.3
CACNA1C-227ENST00000491104 CKS1BP61024 79 aa6.93□□□□□ -1.3
CACNA1C-227ENST00000491104 C9orf116Q5BN46 136 aaPredicted RBP6.93□□□□□ -1.3
CACNA1C-227ENST00000491104 STPG4Q8N801 248 aa6.93□□□□□ -1.3
CACNA1C-227ENST00000491104 HERVK_113P61574 105 aa6.92□□□□□ -1.3
CACNA1C-227ENST00000491104 F8WDY8 70 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 LEPROTO15243 131 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 SCGB1D1O95968 90 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 CHTF8P0CG12 524 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 CXCL5P42830 114 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 HAMPP81172 84 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 FAM30AQ9NZY2 134 aa6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 APOBP04114 4563 aaKnown RBP6.91□□□□□ -1.3
CACNA1C-227ENST00000491104 A0A096LNI7 61 aa6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 IGKV2D-26A0A0A0MRZ7 120 aa6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 PANO1I0J062 215 aa6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
CACNA1C-227ENST00000491104 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
CACNA1C-227ENST00000491104 E9PLD3 99 aa6.89□□□□□ -1.31
CACNA1C-227ENST00000491104 J3QQQ9 107 aa6.89□□□□□ -1.31
CACNA1C-227ENST00000491104 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
CACNA1C-227ENST00000491104 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
CACNA1C-227ENST00000491104 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
CACNA1C-227ENST00000491104 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
CACNA1C-227ENST00000491104 LGALS3P17931 250 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-227ENST00000491104 TTTY13Q9BZ97 58 aa6.88□□□□□ -1.31
CACNA1C-227ENST00000491104 NDUFA12Q9UI09 145 aa6.88□□□□□ -1.31
CACNA1C-227ENST00000491104 RYR1P21817 5038 aa6.87□□□□□ -1.31
CACNA1C-227ENST00000491104 HERC2O95714 4834 aa6.87□□□□□ -1.31
CACNA1C-227ENST00000491104 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
CACNA1C-227ENST00000491104 Q6ZRP5 223 aa6.87□□□□□ -1.31
CACNA1C-227ENST00000491104 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
CACNA1C-227ENST00000491104 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 PFN2P35080 140 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 NMUP48645 174 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 AKR1D1P51857 326 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 PTTG1IPP53801 180 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 JOSD1Q15040 202 aaPredicted RBP6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 Q6ZSA8 131 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 ERG28Q9UKR5 140 aa6.86□□□□□ -1.31
CACNA1C-227ENST00000491104 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
CACNA1C-227ENST00000491104 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
CACNA1C-227ENST00000491104 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
CACNA1C-227ENST00000491104 SPACA4Q8TDM5 124 aa6.85□□□□□ -1.31
CACNA1C-227ENST00000491104 HSBP1L1C9JCN9 74 aa6.84□□□□□ -1.31
CACNA1C-227ENST00000491104 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
CACNA1C-227ENST00000491104 XGP55808 180 aa6.84□□□□□ -1.31
CACNA1C-227ENST00000491104 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
CACNA1C-227ENST00000491104 SCXQ7RTU7 201 aa6.84□□□□□ -1.31
CACNA1C-227ENST00000491104 XAGE1AQ9HD64 81 aa6.84□□□□□ -1.31
CACNA1C-227ENST00000491104 FAM168BA1KXE4 195 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 LINC00158P58513 81 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 HERV-K104P63124 156 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 PCP2Q8IVA1 136 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 KIAA1109Q2LD37 5005 aa6.83□□□□□ -1.32
CACNA1C-227ENST00000491104 A0A087WYN8 130 aa6.82□□□□□ -1.32
CACNA1C-227ENST00000491104 A0A0J9YXY3 114 aa6.82□□□□□ -1.32
CACNA1C-227ENST00000491104 CIRBP-AS1Q8TBR5 109 aa6.82□□□□□ -1.32
CACNA1C-227ENST00000491104 PAM16Q9Y3D7 125 aa6.82□□□□□ -1.32
CACNA1C-227ENST00000491104 A0A1W2PNN7 141 aa6.81□□□□□ -1.32
CACNA1C-227ENST00000491104 DAND5Q8N907 189 aa6.81□□□□□ -1.32
CACNA1C-227ENST00000491104 SPATA45Q537H7 98 aa6.8□□□□□ -1.32
CACNA1C-227ENST00000491104 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
CACNA1C-227ENST00000491104 KRTAP7-1Q8IUC3 87 aa6.8□□□□□ -1.32
CACNA1C-227ENST00000491104 MIR7-3HGQ8N6C7 128 aa6.8□□□□□ -1.32
CACNA1C-227ENST00000491104 VAMP8Q9BV40 100 aa6.8□□□□□ -1.32
CACNA1C-227ENST00000491104 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
CACNA1C-227ENST00000491104 HSPG2P98160 4391 aa6.8□□□□□ -1.32
CACNA1C-227ENST00000491104 LOC105371267A0A1B0GV96 52 aa6.79□□□□□ -1.32
CACNA1C-227ENST00000491104 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
CACNA1C-227ENST00000491104 NPC2P61916 151 aa6.79□□□□□ -1.32
CACNA1C-227ENST00000491104 COX17Q14061 63 aa6.79□□□□□ -1.32
CACNA1C-227ENST00000491104 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
CACNA1C-227ENST00000491104 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
CACNA1C-227ENST00000491104 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
CACNA1C-227ENST00000491104 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms