RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 VPS25Q9BRG1 176 aa6.73□□□□□ -1.33
TTC28-207ENST00000490475 IGKV3OR2-268A0A0C4DH90 116 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 H7C423 109 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 K7EP34 96 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 IGKCP01834 107 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 ODF1Q14990 250 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 KRTAP26-1Q6PEX3 210 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 C9orf163Q8N9P6 203 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 KIR2DL4Q99706 377 aa6.72□□□□□ -1.33
TTC28-207ENST00000490475 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
TTC28-207ENST00000490475 H0Y8G0 127 aa6.71□□□□□ -1.34
TTC28-207ENST00000490475 RPL32P62910 135 aaKnown RBP6.71□□□□□ -1.34
TTC28-207ENST00000490475 ORMDL2Q53FV1 153 aa6.71□□□□□ -1.34
TTC28-207ENST00000490475 SMIM13P0DJ93 91 aa6.7□□□□□ -1.34
TTC28-207ENST00000490475 FABP2P12104 132 aa6.7□□□□□ -1.34
TTC28-207ENST00000490475 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
TTC28-207ENST00000490475 ERASQ7Z444 233 aa6.7□□□□□ -1.34
TTC28-207ENST00000490475 TMEM101Q96IK0 257 aa6.7□□□□□ -1.34
TTC28-207ENST00000490475 SMIM2Q9BVW6 85 aa6.7□□□□□ -1.34
TTC28-207ENST00000490475 A0A1W2PPM0 123 aa6.69□□□□□ -1.34
TTC28-207ENST00000490475 PRSS1P07477 247 aa6.69□□□□□ -1.34
TTC28-207ENST00000490475 CNBPP62633 177 aaKnown RBP6.69□□□□□ -1.34
TTC28-207ENST00000490475 PAPPA-AS1Q5QFB9 102 aa6.69□□□□□ -1.34
TTC28-207ENST00000490475 CDC42SE2Q9NRR3 84 aa6.69□□□□□ -1.34
TTC28-207ENST00000490475 DNAH8Q96JB1 4490 aa6.68□□□□□ -1.34
TTC28-207ENST00000490475 A0A1B0GV72 72 aa6.68□□□□□ -1.34
TTC28-207ENST00000490475 RPL39P62891 51 aaKnown RBP6.68□□□□□ -1.34
TTC28-207ENST00000490475 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
TTC28-207ENST00000490475 Q6ZVH6 145 aa6.68□□□□□ -1.34
TTC28-207ENST00000490475 UBE2D4Q9Y2X8 147 aa6.68□□□□□ -1.34
TTC28-207ENST00000490475 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
TTC28-207ENST00000490475 GAGE12HA6NDE8 117 aa6.67□□□□□ -1.34
TTC28-207ENST00000490475 F8VRH5 84 aa6.67□□□□□ -1.34
TTC28-207ENST00000490475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.67□□□□□ -1.34
TTC28-207ENST00000490475 NMUP48645 174 aa6.67□□□□□ -1.34
TTC28-207ENST00000490475 KRTAP10-4P60372 401 aaPredicted RBP6.67□□□□□ -1.34
TTC28-207ENST00000490475 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
TTC28-207ENST00000490475 CHCHD10Q8WYQ3 142 aaPredicted RBP6.67□□□□□ -1.34
TTC28-207ENST00000490475 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 F8W1H4 67 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 H3BUT2 72 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 J3QR89 54 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 SDIM1Q6ZPB5 146 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 CEND1Q8N111 149 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 OPRPNQ99935 248 aaPredicted RBP6.66□□□□□ -1.34
TTC28-207ENST00000490475 PKIGQ9Y2B9 76 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 SPCS1Q9Y6A9 102 aa6.66□□□□□ -1.34
TTC28-207ENST00000490475 A0A1B0GWB2 263 aa6.65□□□□□ -1.34
TTC28-207ENST00000490475 XCL1P47992 114 aa6.65□□□□□ -1.34
TTC28-207ENST00000490475 CIRBPQ14011 172 aaKnown RBP6.65□□□□□ -1.34
TTC28-207ENST00000490475 ZC2HC1BQ5TFG8 222 aa6.65□□□□□ -1.34
TTC28-207ENST00000490475 PCP2Q8IVA1 136 aa6.65□□□□□ -1.34
TTC28-207ENST00000490475 DPH3Q96FX2 82 aa6.65□□□□□ -1.34
TTC28-207ENST00000490475 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
TTC28-207ENST00000490475 E9PLD3 99 aa6.64□□□□□ -1.35
TTC28-207ENST00000490475 SMAGPQ0VAQ4 97 aa6.64□□□□□ -1.35
TTC28-207ENST00000490475 FOXI1Q12951 378 aa6.64□□□□□ -1.35
TTC28-207ENST00000490475 Q6ZRU5 148 aa6.64□□□□□ -1.35
TTC28-207ENST00000490475 Q6ZUT4 128 aa6.64□□□□□ -1.35
TTC28-207ENST00000490475 MTURNQ8N3F0 131 aa6.64□□□□□ -1.35
TTC28-207ENST00000490475 TIMM21Q9BVV7 248 aa6.64□□□□□ -1.35
TTC28-207ENST00000490475 TRAV13-1A0A0B4J241 112 aa6.63□□□□□ -1.35
TTC28-207ENST00000490475 SS18Q15532 418 aa6.63□□□□□ -1.35
TTC28-207ENST00000490475 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
TTC28-207ENST00000490475 MRPL35Q9NZE8 188 aaKnown RBP6.63□□□□□ -1.35
TTC28-207ENST00000490475 TP73-AS1Q9UF72 201 aa6.63□□□□□ -1.35
TTC28-207ENST00000490475 SLPIP03973 132 aa6.62□□□□□ -1.35
TTC28-207ENST00000490475 C15orf56Q8N910 161 aa6.62□□□□□ -1.35
TTC28-207ENST00000490475 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
TTC28-207ENST00000490475 TMEM141Q96I45 108 aa6.62□□□□□ -1.35
TTC28-207ENST00000490475 SCGB3A1Q96QR1 104 aa6.62□□□□□ -1.35
TTC28-207ENST00000490475 SPANXA1Q9NS26 97 aa6.62□□□□□ -1.35
TTC28-207ENST00000490475 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
TTC28-207ENST00000490475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
TTC28-207ENST00000490475 IGKV2D-26A0A0A0MRZ7 120 aa6.61□□□□□ -1.35
TTC28-207ENST00000490475 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
TTC28-207ENST00000490475 HIGD2BQ4VC39 106 aa6.61□□□□□ -1.35
TTC28-207ENST00000490475 CD164L2Q6UWJ8 174 aa6.61□□□□□ -1.35
TTC28-207ENST00000490475 C2orf66Q6UXQ4 117 aa6.61□□□□□ -1.35
TTC28-207ENST00000490475 LINC00474Q9P2X8 69 aa6.61□□□□□ -1.35
TTC28-207ENST00000490475 FXYD2P54710 66 aa6.6□□□□□ -1.35
TTC28-207ENST00000490475 HERVK_113P61574 105 aa6.6□□□□□ -1.35
TTC28-207ENST00000490475 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
TTC28-207ENST00000490475 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
TTC28-207ENST00000490475 TIMM17AQ99595 171 aa6.6□□□□□ -1.35
TTC28-207ENST00000490475 VCX2Q9H322 139 aa6.6□□□□□ -1.35
TTC28-207ENST00000490475 CYSLTR1Q9Y271 337 aa6.6□□□□□ -1.35
TTC28-207ENST00000490475 PYGO1Q9Y3Y4 419 aa6.6□□□□□ -1.35
TTC28-207ENST00000490475 IGLV4-3A0A075B6K6 122 aa6.59□□□□□ -1.35
TTC28-207ENST00000490475 A0A087WYN8 130 aa6.59□□□□□ -1.35
TTC28-207ENST00000490475 C5orf38Q86SI9 138 aa6.59□□□□□ -1.35
TTC28-207ENST00000490475 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
TTC28-207ENST00000490475 HIST1H4GQ99525 98 aa6.59□□□□□ -1.35
TTC28-207ENST00000490475 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
TTC28-207ENST00000490475 IGIPA6NJ69 53 aa6.58□□□□□ -1.36
TTC28-207ENST00000490475 SPANXB1Q9NS25 103 aaPredicted RBP6.58□□□□□ -1.36
TTC28-207ENST00000490475 NHP2Q9NX24 153 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms