RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	C14orf144	Q96I85	54 aa		11.99	□□□□□ -0.49
SRM-206	ENST00000490101	DLEU1	O43261	78 aa		11.98	□□□□□ -0.49
SRM-206	ENST00000490101	LGALS3	P17931	250 aa	Known RBP	11.98	□□□□□ -0.49
SRM-206	ENST00000490101	ORAOV1	Q8WV07	137 aa		11.98	□□□□□ -0.49
SRM-206	ENST00000490101	PRO1933	Q9H354	126 aa		11.98	□□□□□ -0.49
SRM-206	ENST00000490101	SLC25A34	Q6PIV7	304 aa		11.97	□□□□□ -0.49
SRM-206	ENST00000490101	BOD1L2	Q8IYS8	172 aa		11.97	□□□□□ -0.49
SRM-206	ENST00000490101		Q8IZM0	81 aa		11.97	□□□□□ -0.49
SRM-206	ENST00000490101		Q8N1X5	172 aa		11.97	□□□□□ -0.49
SRM-206	ENST00000490101	TTTY13	Q9BZ97	58 aa		11.97	□□□□□ -0.49
SRM-206	ENST00000490101	KIAA0087	Q14695	138 aa		11.96	□□□□□ -0.49
SRM-206	ENST00000490101	CFAP161	Q6P656	301 aa		11.96	□□□□□ -0.49
SRM-206	ENST00000490101	TOMM7	Q9P0U1	55 aa		11.96	□□□□□ -0.49
SRM-206	ENST00000490101		Q6ZRN7	208 aa	Predicted RBP	11.95	□□□□□ -0.5
SRM-206	ENST00000490101	C15orf56	Q8N910	161 aa		11.95	□□□□□ -0.5
SRM-206	ENST00000490101	NDUFA12	Q9UI09	145 aa		11.95	□□□□□ -0.5
SRM-206	ENST00000490101	MYMX	A0A1B0GTQ4	84 aa		11.94	□□□□□ -0.5
SRM-206	ENST00000490101	ZNF815P	A8K554	130 aa		11.94	□□□□□ -0.5
SRM-206	ENST00000490101	TSTD3	H0UI37	97 aa		11.94	□□□□□ -0.5
SRM-206	ENST00000490101	PRSS2	P07478	247 aa		11.94	□□□□□ -0.5
SRM-206	ENST00000490101	FUS	P35637	526 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
SRM-206	ENST00000490101	C6orf226	Q5I0X4	101 aa		11.94	□□□□□ -0.5
SRM-206	ENST00000490101	UQCR10	Q9UDW1	63 aa		11.94	□□□□□ -0.5
SRM-206	ENST00000490101	NDUFA1	O15239	70 aa		11.93	□□□□□ -0.5
SRM-206	ENST00000490101	SPAG11B	Q08648	103 aa		11.93	□□□□□ -0.5
SRM-206	ENST00000490101	ZNF625	Q96I27	306 aa	Predicted RBP	11.93	□□□□□ -0.5
SRM-206	ENST00000490101	MIEN1	Q9BRT3	115 aa		11.93	□□□□□ -0.5
SRM-206	ENST00000490101	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.92	□□□□□ -0.5
SRM-206	ENST00000490101	USP17L23	D6RBM5	183 aa		11.92	□□□□□ -0.5
SRM-206	ENST00000490101	PSCA	O43653	123 aa		11.92	□□□□□ -0.5
SRM-206	ENST00000490101	SFTA2	Q6UW10	78 aa		11.92	□□□□□ -0.5
SRM-206	ENST00000490101	CXCL5	P42830	114 aa		11.91	□□□□□ -0.5
SRM-206	ENST00000490101	EREG	O14944	169 aa		11.9	□□□□□ -0.5
SRM-206	ENST00000490101	HERV-K104	P63124	156 aa		11.9	□□□□□ -0.5
SRM-206	ENST00000490101	NTN5	Q8WTR8	489 aa	Predicted RBP	11.9	□□□□□ -0.5
SRM-206	ENST00000490101	C2orf48	Q96LS8	159 aa		11.9	□□□□□ -0.5
SRM-206	ENST00000490101		F8WDY8	70 aa		11.89	□□□□□ -0.51
SRM-206	ENST00000490101	ZNF561-AS1	K7EIQ3	104 aa		11.89	□□□□□ -0.51
SRM-206	ENST00000490101	CKS1B	P61024	79 aa		11.89	□□□□□ -0.51
SRM-206	ENST00000490101	HIGD2B	Q4VC39	106 aa		11.89	□□□□□ -0.51
SRM-206	ENST00000490101	TP73-AS1	Q9UF72	201 aa		11.89	□□□□□ -0.51
SRM-206	ENST00000490101	PGPEP1	Q9NXJ5	209 aa		11.88	□□□□□ -0.51
SRM-206	ENST00000490101		A0A0J9YXY3	114 aa		11.87	□□□□□ -0.51
SRM-206	ENST00000490101	C2orf82	Q6UX34	121 aa		11.87	□□□□□ -0.51
SRM-206	ENST00000490101	C2orf91	Q6ZV80	131 aa		11.87	□□□□□ -0.51
SRM-206	ENST00000490101	LINC00526	Q96FQ7	95 aa		11.87	□□□□□ -0.51
SRM-206	ENST00000490101	FAT1	Q14517	4588 aa		11.87	□□□□□ -0.51
SRM-206	ENST00000490101	HERC1	Q15751	4861 aa		11.86	□□□□□ -0.51
SRM-206	ENST00000490101	LRCOL1	A6NCL2	159 aa		11.86	□□□□□ -0.51
SRM-206	ENST00000490101	WFDC2	Q14508	124 aa		11.86	□□□□□ -0.51
SRM-206	ENST00000490101	SCGB1D4	Q6XE38	83 aa		11.86	□□□□□ -0.51
SRM-206	ENST00000490101	HIGD1B	Q9P298	99 aa		11.86	□□□□□ -0.51
SRM-206	ENST00000490101	LECT2	O14960	151 aa		11.85	□□□□□ -0.51
SRM-206	ENST00000490101	C14orf177	Q52M58	125 aa		11.85	□□□□□ -0.51
SRM-206	ENST00000490101		A0A087WTM6	91 aa		11.84	□□□□□ -0.51
SRM-206	ENST00000490101	EPM2A	B3EWF7	344 aa		11.84	□□□□□ -0.51
SRM-206	ENST00000490101	TIMM17B	O60830	172 aa		11.84	□□□□□ -0.51
SRM-206	ENST00000490101	HNRNPA3	P51991	378 aa	Known RBP	11.84	□□□□□ -0.51
SRM-206	ENST00000490101	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.84	□□□□□ -0.51
SRM-206	ENST00000490101	DDT	P30046	118 aa		11.83	□□□□□ -0.52
SRM-206	ENST00000490101	C10orf25	Q5T742	122 aa		11.83	□□□□□ -0.52
SRM-206	ENST00000490101	CAMK2N2	Q96S95	79 aa		11.83	□□□□□ -0.52
SRM-206	ENST00000490101	LINC00587	B1AMM8	73 aa		11.82	□□□□□ -0.52
SRM-206	ENST00000490101	TRBV30	A0A0K0K1B3	111 aa		11.81	□□□□□ -0.52
SRM-206	ENST00000490101	SYCN	Q0VAF6	134 aa		11.81	□□□□□ -0.52
SRM-206	ENST00000490101	CIRBP	Q14011	172 aa	Known RBP	11.81	□□□□□ -0.52
SRM-206	ENST00000490101	LITAF	Q99732	161 aa		11.81	□□□□□ -0.52
SRM-206	ENST00000490101	SLPI	P03973	132 aa		11.8	□□□□□ -0.52
SRM-206	ENST00000490101	XG	P55808	180 aa		11.8	□□□□□ -0.52
SRM-206	ENST00000490101	KRTAP10-1	P60331	282 aa		11.8	□□□□□ -0.52
SRM-206	ENST00000490101	MEIG1	Q5JSS6	88 aa		11.8	□□□□□ -0.52
SRM-206	ENST00000490101		Q6ZRU5	148 aa		11.8	□□□□□ -0.52
SRM-206	ENST00000490101	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.8	□□□□□ -0.52
SRM-206	ENST00000490101	ERG28	Q9UKR5	140 aa		11.8	□□□□□ -0.52
SRM-206	ENST00000490101	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.8	□□□□□ -0.52
SRM-206	ENST00000490101	VPS13B	Q7Z7G8	4022 aa		11.8	□□□□□ -0.52
SRM-206	ENST00000490101	TMEM238	C9JI98	176 aa		11.79	□□□□□ -0.52
SRM-206	ENST00000490101	RNF151	Q2KHN1	245 aa		11.79	□□□□□ -0.52
SRM-206	ENST00000490101	C6orf48	Q9UBA6	75 aa		11.79	□□□□□ -0.52
SRM-206	ENST00000490101	SRRM2	Q9UQ35	2752 aa	Known RBP	11.78	□□□□□ -0.52
SRM-206	ENST00000490101	SMIM13	P0DJ93	91 aa		11.78	□□□□□ -0.52
SRM-206	ENST00000490101	CNBP	P62633	177 aa	Known RBP	11.78	□□□□□ -0.52
SRM-206	ENST00000490101	COX17	Q14061	63 aa		11.78	□□□□□ -0.52
SRM-206	ENST00000490101	ADAMTSL4-AS1	Q5T5F5	129 aa		11.78	□□□□□ -0.52
SRM-206	ENST00000490101	PCP4L1	A6NKN8	68 aa		11.77	□□□□□ -0.53
SRM-206	ENST00000490101	TAL2	Q16559	108 aa		11.77	□□□□□ -0.53
SRM-206	ENST00000490101		Q6ZVH6	145 aa		11.77	□□□□□ -0.53
SRM-206	ENST00000490101	CARD19	Q96LW7	228 aa		11.77	□□□□□ -0.53
SRM-206	ENST00000490101	SPANXD	Q9BXN6	97 aa		11.77	□□□□□ -0.53
SRM-206	ENST00000490101	SPANXC	Q9NY87	97 aa		11.77	□□□□□ -0.53
SRM-206	ENST00000490101	INAFM2	P0DMQ5	153 aa		11.76	□□□□□ -0.53
SRM-206	ENST00000490101	LINC00158	P58513	81 aa		11.76	□□□□□ -0.53
SRM-206	ENST00000490101	CTAG1A	P78358	180 aa		11.76	□□□□□ -0.53
SRM-206	ENST00000490101	C9orf116	Q5BN46	136 aa	Predicted RBP	11.76	□□□□□ -0.53
SRM-206	ENST00000490101		Q5VSD8	79 aa		11.76	□□□□□ -0.53
SRM-206	ENST00000490101	GCSH	P23434	173 aa		11.75	□□□□□ -0.53
SRM-206	ENST00000490101	PFN2	P35080	140 aa		11.75	□□□□□ -0.53
SRM-206	ENST00000490101	HSD52	Q0P140	79 aa		11.75	□□□□□ -0.53
SRM-206	ENST00000490101	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SRM-206	ENST00000490101		Q8N814	137 aa		11.75	□□□□□ -0.53

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