RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 KRTAP9-6A0A140TA67 174 aa9.93□□□□□ -0.82
TOP3B-217ENST00000489581 BCE1O60756 84 aa9.93□□□□□ -0.82
TOP3B-217ENST00000489581 MRPL55Q7Z7F7 128 aaKnown RBP9.93□□□□□ -0.82
TOP3B-217ENST00000489581 Q8IZM0 81 aa9.93□□□□□ -0.82
TOP3B-217ENST00000489581 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
TOP3B-217ENST00000489581 ALKBH7Q9BT30 221 aaPredicted RBP9.93□□□□□ -0.82
TOP3B-217ENST00000489581 AMELXQ99217 191 aa9.92□□□□□ -0.82
TOP3B-217ENST00000489581 VCX2Q9H322 139 aa9.92□□□□□ -0.82
TOP3B-217ENST00000489581 TP73-AS1Q9UF72 201 aa9.92□□□□□ -0.82
TOP3B-217ENST00000489581 RPL37AP8A6NKH3 93 aa9.91□□□□□ -0.82
TOP3B-217ENST00000489581 C2orf66Q6UXQ4 117 aa9.91□□□□□ -0.82
TOP3B-217ENST00000489581 CYSLTR1Q9Y271 337 aa9.91□□□□□ -0.82
TOP3B-217ENST00000489581 PRSS47A8MTI9 375 aa9.9□□□□□ -0.82
TOP3B-217ENST00000489581 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.82
TOP3B-217ENST00000489581 KRTAP13-2Q52LG2 175 aa9.9□□□□□ -0.82
TOP3B-217ENST00000489581 LINC00167Q96N53 147 aa9.9□□□□□ -0.82
TOP3B-217ENST00000489581 hCG_2014768A0A024R1R8 64 aa9.89□□□□□ -0.83
TOP3B-217ENST00000489581 F8VRH5 84 aa9.89□□□□□ -0.83
TOP3B-217ENST00000489581 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
TOP3B-217ENST00000489581 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
TOP3B-217ENST00000489581 GAGE10A6NGK3 116 aa9.87□□□□□ -0.83
TOP3B-217ENST00000489581 PEA15Q15121 130 aa9.87□□□□□ -0.83
TOP3B-217ENST00000489581 ATP5L2Q7Z4Y8 100 aa9.87□□□□□ -0.83
TOP3B-217ENST00000489581 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
TOP3B-217ENST00000489581 Q8N8P6 123 aa9.87□□□□□ -0.83
TOP3B-217ENST00000489581 CDIP1Q9H305 208 aa9.87□□□□□ -0.83
TOP3B-217ENST00000489581 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
TOP3B-217ENST00000489581 LAMTOR2Q9Y2Q5 125 aa9.86□□□□□ -0.83
TOP3B-217ENST00000489581 IGIPA6NJ69 53 aa9.85□□□□□ -0.83
TOP3B-217ENST00000489581 HERVK_113P63121 156 aa9.85□□□□□ -0.83
TOP3B-217ENST00000489581 LINC00304Q8N9R0 145 aa9.85□□□□□ -0.83
TOP3B-217ENST00000489581 NPSP0C0P6 89 aa9.84□□□□□ -0.83
TOP3B-217ENST00000489581 UBE2AP49459 152 aa9.84□□□□□ -0.83
TOP3B-217ENST00000489581 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
TOP3B-217ENST00000489581 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
TOP3B-217ENST00000489581 SEC11AP67812 179 aa9.83□□□□□ -0.84
TOP3B-217ENST00000489581 KRTAP13-1Q8IUC0 172 aa9.83□□□□□ -0.84
TOP3B-217ENST00000489581 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
TOP3B-217ENST00000489581 CXCL5P42830 114 aa9.82□□□□□ -0.84
TOP3B-217ENST00000489581 TPRXLQ17RH7 258 aa9.82□□□□□ -0.84
TOP3B-217ENST00000489581 RAB5BP61020 215 aa9.81□□□□□ -0.84
TOP3B-217ENST00000489581 PNRC1Q12796 327 aaPredicted RBP9.81□□□□□ -0.84
TOP3B-217ENST00000489581 FAM229BQ4G0N7 80 aa9.81□□□□□ -0.84
TOP3B-217ENST00000489581 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
TOP3B-217ENST00000489581 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
TOP3B-217ENST00000489581 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
TOP3B-217ENST00000489581 SCO1O75880 301 aa9.79□□□□□ -0.84
TOP3B-217ENST00000489581 NKAPP1Q8N9T2 125 aa9.79□□□□□ -0.84
TOP3B-217ENST00000489581 COX7B2Q8TF08 81 aa9.79□□□□□ -0.84
TOP3B-217ENST00000489581 IGLV5-37A0A075B6J1 123 aa9.78□□□□□ -0.84
TOP3B-217ENST00000489581 IGKV2-28A0A075B6P5 120 aa9.78□□□□□ -0.84
TOP3B-217ENST00000489581 K7EMI3 77 aa9.78□□□□□ -0.84
TOP3B-217ENST00000489581 IGKV2D-28P01615 120 aa9.78□□□□□ -0.84
TOP3B-217ENST00000489581 NXT2Q9NPJ8 142 aaKnown RBP9.78□□□□□ -0.84
TOP3B-217ENST00000489581 PDZD11Q5EBL8 140 aa9.77□□□□□ -0.85
TOP3B-217ENST00000489581 TIMM17AQ99595 171 aa9.77□□□□□ -0.85
TOP3B-217ENST00000489581 PRLHP81277 87 aa9.76□□□□□ -0.85
TOP3B-217ENST00000489581 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
TOP3B-217ENST00000489581 PPDPFQ9H3Y8 114 aa9.75□□□□□ -0.85
TOP3B-217ENST00000489581 TINCRA0A1B0GVN0 87 aa9.74□□□□□ -0.85
TOP3B-217ENST00000489581 G0S2P27469 103 aa9.74□□□□□ -0.85
TOP3B-217ENST00000489581 FAM19A1Q7Z5A9 133 aa9.74□□□□□ -0.85
TOP3B-217ENST00000489581 SCGB3A1Q96QR1 104 aa9.74□□□□□ -0.85
TOP3B-217ENST00000489581 SPINK8P0C7L1 97 aa9.73□□□□□ -0.85
TOP3B-217ENST00000489581 ERASQ7Z444 233 aa9.73□□□□□ -0.85
TOP3B-217ENST00000489581 C3orf22Q8N5N4 141 aa9.73□□□□□ -0.85
TOP3B-217ENST00000489581 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
TOP3B-217ENST00000489581 ADCYAP1P18509 176 aa9.72□□□□□ -0.85
TOP3B-217ENST00000489581 CTAG1AP78358 180 aa9.72□□□□□ -0.85
TOP3B-217ENST00000489581 TMEM238C9JI98 176 aa9.71□□□□□ -0.86
TOP3B-217ENST00000489581 MT-ND4LP03901 98 aa9.7□□□□□ -0.86
TOP3B-217ENST00000489581 PFN2P35080 140 aa9.7□□□□□ -0.86
TOP3B-217ENST00000489581 KIAA1644Q3SXP7 199 aa9.7□□□□□ -0.86
TOP3B-217ENST00000489581 PLEKHB2Q96CS7 222 aa9.7□□□□□ -0.86
TOP3B-217ENST00000489581 ANAPC16Q96DE5 110 aa9.7□□□□□ -0.86
TOP3B-217ENST00000489581 TMEM126AQ9H061 195 aa9.7□□□□□ -0.86
TOP3B-217ENST00000489581 CST9LQ9H4G1 147 aa9.69□□□□□ -0.86
TOP3B-217ENST00000489581 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
TOP3B-217ENST00000489581 ATP5LO75964 103 aa9.68□□□□□ -0.86
TOP3B-217ENST00000489581 VPREB1P12018 145 aa9.68□□□□□ -0.86
TOP3B-217ENST00000489581 M0R378 163 aa9.67□□□□□ -0.86
TOP3B-217ENST00000489581 CBLN2Q8IUK8 224 aa9.66□□□□□ -0.86
TOP3B-217ENST00000489581 SND1-IT1Q9HBX3 110 aa9.66□□□□□ -0.86
TOP3B-217ENST00000489581 SPAG11AQ6PDA7 123 aa9.65□□□□□ -0.86
TOP3B-217ENST00000489581 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
TOP3B-217ENST00000489581 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
TOP3B-217ENST00000489581 HIGD2AQ9BW72 106 aa9.64□□□□□ -0.87
TOP3B-217ENST00000489581 H3BRM9 83 aa9.63□□□□□ -0.87
TOP3B-217ENST00000489581 RAB14P61106 215 aa9.63□□□□□ -0.87
TOP3B-217ENST00000489581 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
TOP3B-217ENST00000489581 PMVKQ15126 192 aa9.63□□□□□ -0.87
TOP3B-217ENST00000489581 FP248Q71RG6 208 aaPredicted RBP9.63□□□□□ -0.87
TOP3B-217ENST00000489581 Q8NDZ9 215 aa9.63□□□□□ -0.87
TOP3B-217ENST00000489581 A0A1B0GVG6 124 aa9.62□□□□□ -0.87
TOP3B-217ENST00000489581 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
TOP3B-217ENST00000489581 GNB1LQ9BYB4 327 aa9.62□□□□□ -0.87
TOP3B-217ENST00000489581 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
TOP3B-217ENST00000489581 LINC01549A6NIU2 74 aa9.61□□□□□ -0.87
TOP3B-217ENST00000489581 LINC01547P58512 204 aaPredicted RBP9.61□□□□□ -0.87
TOP3B-217ENST00000489581 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms