RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 LOC389332A0A1B0GUA5 103 aa5.47□□□□□ -1.53
TNRC6B-208ENST00000489500 LINC01561Q8N1V8 128 aa5.47□□□□□ -1.53
TNRC6B-208ENST00000489500 OPRPNQ99935 248 aaPredicted RBP5.47□□□□□ -1.53
TNRC6B-208ENST00000489500 VCX2Q9H322 139 aa5.47□□□□□ -1.53
TNRC6B-208ENST00000489500 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 A0A087WZ39 114 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 A0A1B0GVG6 124 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 A0A1W2PNN7 141 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 PRSS47A8MTI9 375 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 CKS1BP61024 79 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 SRSF9Q13242 221 aaKnown RBP eCLIP5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 C1orf137Q5JT78 98 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 Q8N8P6 123 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 DIRC1Q969H9 104 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 CTDSP1Q9GZU7 261 aa5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 NXT2Q9NPJ8 142 aaKnown RBP5.46□□□□□ -1.54
TNRC6B-208ENST00000489500 LINC01549A6NIU2 74 aa5.45□□□□□ -1.54
TNRC6B-208ENST00000489500 UBE2BP63146 152 aa5.45□□□□□ -1.54
TNRC6B-208ENST00000489500 GAGE2EQ4V326 116 aa5.45□□□□□ -1.54
TNRC6B-208ENST00000489500 LCE1EQ5T753 118 aa5.45□□□□□ -1.54
TNRC6B-208ENST00000489500 C2orf66Q6UXQ4 117 aa5.45□□□□□ -1.54
TNRC6B-208ENST00000489500 GAGE2DQ9UEU5 116 aa5.45□□□□□ -1.54
TNRC6B-208ENST00000489500 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
TNRC6B-208ENST00000489500 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 IGLV4-3A0A075B6K6 122 aa5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 PRYO14603 147 aa5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 C6orf226Q5I0X4 101 aa5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 LINC00242Q5T6M2 205 aa5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 UNQ6190/PRO20217Q6UXQ8 127 aa5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 PHF5AQ7RTV0 110 aaKnown RBP5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 GEMIN7Q9H840 131 aaKnown RBP5.44□□□□□ -1.54
TNRC6B-208ENST00000489500 NDUFC2-KCTD14E9PQ53 114 aa5.43□□□□□ -1.54
TNRC6B-208ENST00000489500 S100PP25815 95 aa5.43□□□□□ -1.54
TNRC6B-208ENST00000489500 HERVK_113P63121 156 aa5.43□□□□□ -1.54
TNRC6B-208ENST00000489500 FAM19A5Q7Z5A7 132 aaPredicted RBP5.43□□□□□ -1.54
TNRC6B-208ENST00000489500 TOMM7Q9P0U1 55 aa5.43□□□□□ -1.54
TNRC6B-208ENST00000489500 C6orf48Q9UBA6 75 aa5.43□□□□□ -1.54
TNRC6B-208ENST00000489500 TRAV9-1A0A075B6T8 112 aa5.42□□□□□ -1.54
TNRC6B-208ENST00000489500 M0QXV9 152 aa5.42□□□□□ -1.54
TNRC6B-208ENST00000489500 IGLV7-43P04211 117 aa5.42□□□□□ -1.54
TNRC6B-208ENST00000489500 UBE2D1P51668 147 aa5.42□□□□□ -1.54
TNRC6B-208ENST00000489500 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
TNRC6B-208ENST00000489500 LBHQ53QV2 105 aaPredicted RBP5.42□□□□□ -1.54
TNRC6B-208ENST00000489500 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
TNRC6B-208ENST00000489500 CXCL5P42830 114 aa5.41□□□□□ -1.54
TNRC6B-208ENST00000489500 COX19Q49B96 90 aa5.41□□□□□ -1.54
TNRC6B-208ENST00000489500 UQCC3Q6UW78 93 aa5.41□□□□□ -1.54
TNRC6B-208ENST00000489500 Q8IZM0 81 aa5.41□□□□□ -1.54
TNRC6B-208ENST00000489500 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
TNRC6B-208ENST00000489500 AMELXQ99217 191 aa5.41□□□□□ -1.54
TNRC6B-208ENST00000489500 TIMM17AQ99595 171 aa5.41□□□□□ -1.54
TNRC6B-208ENST00000489500 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
TNRC6B-208ENST00000489500 FAM19A3Q7Z5A8 133 aa5.4□□□□□ -1.54
TNRC6B-208ENST00000489500 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 IGIPA6NJ69 53 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 H0Y9J4 135 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 NUPR1O60356 82 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 RPL13AP40429 203 aaKnown RBP5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 CLLU1Q5K131 121 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 C2orf82Q6UX34 121 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 ERASQ7Z444 233 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 SCGB3A1Q96QR1 104 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 SMCO4Q9NRQ5 59 aa5.39□□□□□ -1.55
TNRC6B-208ENST00000489500 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
TNRC6B-208ENST00000489500 F8VRH5 84 aa5.38□□□□□ -1.55
TNRC6B-208ENST00000489500 H3BRM9 83 aa5.37□□□□□ -1.55
TNRC6B-208ENST00000489500 PDZD11Q5EBL8 140 aa5.37□□□□□ -1.55
TNRC6B-208ENST00000489500 FA2HQ7L5A8 372 aa5.37□□□□□ -1.55
TNRC6B-208ENST00000489500 LINC00469Q8N7U9 141 aa5.37□□□□□ -1.55
TNRC6B-208ENST00000489500 GNB1LQ9BYB4 327 aa5.37□□□□□ -1.55
TNRC6B-208ENST00000489500 TINCRA0A1B0GVN0 87 aa5.36□□□□□ -1.55
TNRC6B-208ENST00000489500 TMEM218A2RU14 115 aa5.36□□□□□ -1.55
TNRC6B-208ENST00000489500 KIAA1644Q3SXP7 199 aa5.36□□□□□ -1.55
TNRC6B-208ENST00000489500 LINC00173Q6ZV60 143 aa5.36□□□□□ -1.55
TNRC6B-208ENST00000489500 SEC11CQ9BY50 192 aa5.36□□□□□ -1.55
TNRC6B-208ENST00000489500 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
TNRC6B-208ENST00000489500 HMCN2Q8NDA2 5059 aa5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 ZNF861PO60384 105 aa5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 RPL28P46779 137 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 ZC2HC1BQ5TFG8 222 aa5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 TP73-AS1Q9UF72 201 aa5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 CARHSP1Q9Y2V2 147 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 C22orf24Q9Y442 160 aa5.35□□□□□ -1.55
TNRC6B-208ENST00000489500 ATP5LO75964 103 aa5.34□□□□□ -1.55
TNRC6B-208ENST00000489500 FABP9Q0Z7S8 132 aa5.34□□□□□ -1.55
TNRC6B-208ENST00000489500 PMVKQ15126 192 aa5.34□□□□□ -1.55
TNRC6B-208ENST00000489500 MRPL55Q7Z7F7 128 aaKnown RBP5.34□□□□□ -1.55
TNRC6B-208ENST00000489500 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.55
TNRC6B-208ENST00000489500 NKAPP1Q8N9T2 125 aa5.34□□□□□ -1.55
TNRC6B-208ENST00000489500 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
TNRC6B-208ENST00000489500 RHEBQ15382 184 aa5.33□□□□□ -1.56
TNRC6B-208ENST00000489500 LINC01546A6NGU7 62 aa5.32□□□□□ -1.56
TNRC6B-208ENST00000489500 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
TNRC6B-208ENST00000489500 NDUFA6P56556 154 aa5.32□□□□□ -1.56
TNRC6B-208ENST00000489500 RAB5BP61020 215 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms