RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 COX7A2LO14548 114 aa9.42□□□□□ -0.9
CLDN11-209ENST00000489485 IGHV3-64A0A075B6Q5 118 aa9.42□□□□□ -0.9
CLDN11-209ENST00000489485 A0A087WZ39 114 aa9.42□□□□□ -0.9
CLDN11-209ENST00000489485 TMEM238C9JI98 176 aa9.42□□□□□ -0.9
CLDN11-209ENST00000489485 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
CLDN11-209ENST00000489485 MALP21145 153 aa9.42□□□□□ -0.9
CLDN11-209ENST00000489485 PCP2Q8IVA1 136 aa9.42□□□□□ -0.9
CLDN11-209ENST00000489485 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
CLDN11-209ENST00000489485 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
CLDN11-209ENST00000489485 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
CLDN11-209ENST00000489485 A0A087WTM6 91 aa9.4□□□□□ -0.91
CLDN11-209ENST00000489485 TMEM223A0PJW6 202 aa9.4□□□□□ -0.91
CLDN11-209ENST00000489485 LRCOL1A6NCL2 159 aa9.4□□□□□ -0.91
CLDN11-209ENST00000489485 WFDC2Q14508 124 aa9.4□□□□□ -0.91
CLDN11-209ENST00000489485 TAL2Q16559 108 aa9.4□□□□□ -0.91
CLDN11-209ENST00000489485 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
CLDN11-209ENST00000489485 USP17L23D6RBM5 183 aa9.39□□□□□ -0.91
CLDN11-209ENST00000489485 K7EP34 96 aa9.39□□□□□ -0.91
CLDN11-209ENST00000489485 DNAH17Q9UFH2 4485 aa9.39□□□□□ -0.91
CLDN11-209ENST00000489485 K7ERU9 68 aa9.38□□□□□ -0.91
CLDN11-209ENST00000489485 OCIAD2Q56VL3 154 aa9.38□□□□□ -0.91
CLDN11-209ENST00000489485 H3BUT2 72 aa9.38□□□□□ -0.91
CLDN11-209ENST00000489485 IGKV2D-26A0A0A0MRZ7 120 aa9.37□□□□□ -0.91
CLDN11-209ENST00000489485 FABP2P12104 132 aa9.37□□□□□ -0.91
CLDN11-209ENST00000489485 GCSHP23434 173 aa9.37□□□□□ -0.91
CLDN11-209ENST00000489485 HERVK_113P61574 105 aa9.37□□□□□ -0.91
CLDN11-209ENST00000489485 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 A0A1W2PPM0 123 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 APOMO95445 188 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 FAT2Q9NYQ8 4349 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 Q8N814 137 aa9.36□□□□□ -0.91
CLDN11-209ENST00000489485 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.35□□□□□ -0.91
CLDN11-209ENST00000489485 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
CLDN11-209ENST00000489485 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
CLDN11-209ENST00000489485 CEND1Q8N111 149 aa9.35□□□□□ -0.91
CLDN11-209ENST00000489485 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
CLDN11-209ENST00000489485 LINC00526Q96FQ7 95 aa9.35□□□□□ -0.91
CLDN11-209ENST00000489485 E9PLD3 99 aa9.34□□□□□ -0.91
CLDN11-209ENST00000489485 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
CLDN11-209ENST00000489485 SPCS1Q9Y6A9 102 aa9.34□□□□□ -0.91
CLDN11-209ENST00000489485 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
CLDN11-209ENST00000489485 RNF151Q2KHN1 245 aa9.33□□□□□ -0.92
CLDN11-209ENST00000489485 COX7B2Q8TF08 81 aa9.33□□□□□ -0.92
CLDN11-209ENST00000489485 GVQW2A0A096LPI5 108 aaPredicted RBP9.32□□□□□ -0.92
CLDN11-209ENST00000489485 A4D1N5 150 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 LEPROTO15243 131 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 PRSS2P07478 247 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 C6orf226Q5I0X4 101 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 VPS25Q9BRG1 176 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 J3QQQ9 107 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 FXYD2P54710 66 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 KIAA0087Q14695 138 aa9.32□□□□□ -0.92
CLDN11-209ENST00000489485 MYMXA0A1B0GTQ4 84 aa9.31□□□□□ -0.92
CLDN11-209ENST00000489485 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLDN11-209ENST00000489485 Q8IZM0 81 aa9.31□□□□□ -0.92
CLDN11-209ENST00000489485 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
CLDN11-209ENST00000489485 LGALS3P17931 250 aaKnown RBP9.3□□□□□ -0.92
CLDN11-209ENST00000489485 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
CLDN11-209ENST00000489485 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
CLDN11-209ENST00000489485 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
CLDN11-209ENST00000489485 PKD1P98161 4303 aa9.3□□□□□ -0.92
CLDN11-209ENST00000489485 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
CLDN11-209ENST00000489485 NHP2Q9NX24 153 aaKnown RBP9.3□□□□□ -0.92
CLDN11-209ENST00000489485 CKS1BP61024 79 aa9.29□□□□□ -0.92
CLDN11-209ENST00000489485 IGLV5-52A0A0A0MRZ9 124 aa9.28□□□□□ -0.92
CLDN11-209ENST00000489485 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
CLDN11-209ENST00000489485 NTN5Q8WTR8 489 aaPredicted RBP9.28□□□□□ -0.92
CLDN11-209ENST00000489485 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
CLDN11-209ENST00000489485 SLPIP03973 132 aa9.28□□□□□ -0.92
CLDN11-209ENST00000489485 CAMK2N2Q96S95 79 aa9.28□□□□□ -0.92
CLDN11-209ENST00000489485 NAA38Q9BRA0 125 aaKnown RBP9.28□□□□□ -0.92
CLDN11-209ENST00000489485 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
CLDN11-209ENST00000489485 HECTD4Q9Y4D8 3996 aa9.27□□□□□ -0.93
CLDN11-209ENST00000489485 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.27□□□□□ -0.93
CLDN11-209ENST00000489485 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.93
CLDN11-209ENST00000489485 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
CLDN11-209ENST00000489485 C10orf25Q5T742 122 aa9.26□□□□□ -0.93
CLDN11-209ENST00000489485 UNQ6190/PRO20217Q6UXQ8 127 aa9.26□□□□□ -0.93
CLDN11-209ENST00000489485 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 CNBPP62633 177 aaKnown RBP9.25□□□□□ -0.93
CLDN11-209ENST00000489485 SYCNQ0VAF6 134 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 C2orf48Q96LS8 159 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 DNAH11Q96DT5 4516 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 NDUFA1O15239 70 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 CXCL5P42830 114 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 LINC01620Q4KN68 170 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 Q6ZRU5 148 aa9.25□□□□□ -0.93
CLDN11-209ENST00000489485 F8W1H4 67 aa9.24□□□□□ -0.93
CLDN11-209ENST00000489485 K7ERJ3 54 aa9.24□□□□□ -0.93
CLDN11-209ENST00000489485 CARD19Q96LW7 228 aa9.24□□□□□ -0.93
CLDN11-209ENST00000489485 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
CLDN11-209ENST00000489485 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
CLDN11-209ENST00000489485 F8WDY8 70 aa9.22□□□□□ -0.93
CLDN11-209ENST00000489485 C9orf163Q8N9P6 203 aa9.22□□□□□ -0.93
CLDN11-209ENST00000489485 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms