RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SUMO2P61956 95 aaKnown RBP7.92□□□□□ -1.14
UFD1-209ENST00000489406 CCL20P78556 96 aa7.92□□□□□ -1.14
UFD1-209ENST00000489406 ALKBH7Q9BT30 221 aaPredicted RBP7.92□□□□□ -1.14
UFD1-209ENST00000489406 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
UFD1-209ENST00000489406 LINC01561Q8N1V8 128 aa7.91□□□□□ -1.14
UFD1-209ENST00000489406 BIN3Q9NQY0 253 aa7.91□□□□□ -1.14
UFD1-209ENST00000489406 ZNF706Q9Y5V0 76 aaPredicted RBP7.91□□□□□ -1.14
UFD1-209ENST00000489406 F8VRH5 84 aa7.9□□□□□ -1.14
UFD1-209ENST00000489406 Q6ZN92 141 aa7.9□□□□□ -1.14
UFD1-209ENST00000489406 Q8IZM0 81 aa7.9□□□□□ -1.14
UFD1-209ENST00000489406 MBD3L1Q8WWY6 194 aa7.9□□□□□ -1.14
UFD1-209ENST00000489406 KRTAP9-3Q9BYQ3 159 aa7.9□□□□□ -1.14
UFD1-209ENST00000489406 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
UFD1-209ENST00000489406 AMN1Q8IY45 258 aa7.89□□□□□ -1.15
UFD1-209ENST00000489406 NRACQ8N912 160 aa7.89□□□□□ -1.15
UFD1-209ENST00000489406 FAM213BQ8TBF2 198 aa7.89□□□□□ -1.15
UFD1-209ENST00000489406 MOBPQ13875 183 aa7.88□□□□□ -1.15
UFD1-209ENST00000489406 TMEM191AQ9H0A3 160 aa7.88□□□□□ -1.15
UFD1-209ENST00000489406 Q5BKY6 102 aa7.87□□□□□ -1.15
UFD1-209ENST00000489406 GEMIN7Q9H840 131 aaKnown RBP7.87□□□□□ -1.15
UFD1-209ENST00000489406 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
UFD1-209ENST00000489406 MT1FP04733 61 aa7.86□□□□□ -1.15
UFD1-209ENST00000489406 LINC01551Q86U37 167 aa7.86□□□□□ -1.15
UFD1-209ENST00000489406 ANAPC16Q96DE5 110 aa7.85□□□□□ -1.15
UFD1-209ENST00000489406 PPP1R17O96001 155 aa7.84□□□□□ -1.15
UFD1-209ENST00000489406 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
UFD1-209ENST00000489406 RAB5BP61020 215 aa7.84□□□□□ -1.15
UFD1-209ENST00000489406 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
UFD1-209ENST00000489406 GNG13Q9P2W3 67 aa7.84□□□□□ -1.15
UFD1-209ENST00000489406 PPP1R2P9O14990 202 aa7.83□□□□□ -1.16
UFD1-209ENST00000489406 BORCS7Q96B45 105 aa7.83□□□□□ -1.16
UFD1-209ENST00000489406 K7EN84 100 aa7.82□□□□□ -1.16
UFD1-209ENST00000489406 SVIPQ8NHG7 77 aa7.82□□□□□ -1.16
UFD1-209ENST00000489406 MED9Q9NWA0 146 aa7.82□□□□□ -1.16
UFD1-209ENST00000489406 IGLV4-3A0A075B6K6 122 aa7.81□□□□□ -1.16
UFD1-209ENST00000489406 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
UFD1-209ENST00000489406 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
UFD1-209ENST00000489406 MANBALQ9NQG1 85 aa7.81□□□□□ -1.16
UFD1-209ENST00000489406 FXYD6-FXYD2A0A087WZ82 144 aa7.8□□□□□ -1.16
UFD1-209ENST00000489406 TCAPO15273 167 aa7.8□□□□□ -1.16
UFD1-209ENST00000489406 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
UFD1-209ENST00000489406 ZC2HC1BQ5TFG8 222 aa7.8□□□□□ -1.16
UFD1-209ENST00000489406 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
UFD1-209ENST00000489406 A0A1B0GUT8 65 aa7.79□□□□□ -1.16
UFD1-209ENST00000489406 GATCO43716 136 aaKnown RBP7.79□□□□□ -1.16
UFD1-209ENST00000489406 VPREB1P12018 145 aa7.79□□□□□ -1.16
UFD1-209ENST00000489406 CXCL5P42830 114 aa7.79□□□□□ -1.16
UFD1-209ENST00000489406 KRTAP10-10P60014 251 aa7.79□□□□□ -1.16
UFD1-209ENST00000489406 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
UFD1-209ENST00000489406 OCC1Q8TAD7 63 aa7.79□□□□□ -1.16
UFD1-209ENST00000489406 TMEM141Q96I45 108 aa7.79□□□□□ -1.16
UFD1-209ENST00000489406 A8MWL6 223 aa7.78□□□□□ -1.16
UFD1-209ENST00000489406 NPSP0C0P6 89 aa7.78□□□□□ -1.16
UFD1-209ENST00000489406 TEX43Q6ZNM6 134 aa7.78□□□□□ -1.16
UFD1-209ENST00000489406 TIMM17AQ99595 171 aa7.78□□□□□ -1.16
UFD1-209ENST00000489406 GIPP09681 153 aaPredicted RBP7.77□□□□□ -1.17
UFD1-209ENST00000489406 C20orf78Q9BR46 151 aa7.77□□□□□ -1.17
UFD1-209ENST00000489406 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
UFD1-209ENST00000489406 AKAP14Q86UN6 197 aa7.76□□□□□ -1.17
UFD1-209ENST00000489406 C2orf88Q9BSF0 95 aa7.76□□□□□ -1.17
UFD1-209ENST00000489406 PYGO1Q9Y3Y4 419 aa7.76□□□□□ -1.17
UFD1-209ENST00000489406 UMAD1C9J7I0 102 aa7.75□□□□□ -1.17
UFD1-209ENST00000489406 PDE6DO43924 150 aa7.75□□□□□ -1.17
UFD1-209ENST00000489406 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
UFD1-209ENST00000489406 CDKN2A-AS1Q9UH64 79 aa7.75□□□□□ -1.17
UFD1-209ENST00000489406 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
UFD1-209ENST00000489406 MRPL51Q4U2R6 128 aaKnown RBP7.74□□□□□ -1.17
UFD1-209ENST00000489406 SMIM2Q9BVW6 85 aa7.74□□□□□ -1.17
UFD1-209ENST00000489406 TMEM238LA0A1B0GVL6 79 aa7.73□□□□□ -1.17
UFD1-209ENST00000489406 HIGD1CA8MV81 97 aa7.73□□□□□ -1.17
UFD1-209ENST00000489406 IFITM3Q01628 133 aa7.73□□□□□ -1.17
UFD1-209ENST00000489406 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
UFD1-209ENST00000489406 TRBV24-1A0A075B6N3 115 aa7.72□□□□□ -1.17
UFD1-209ENST00000489406 RAB14P61106 215 aa7.72□□□□□ -1.17
UFD1-209ENST00000489406 RPL24P83731 157 aaKnown RBP7.71□□□□□ -1.18
UFD1-209ENST00000489406 Q8NDZ9 215 aa7.71□□□□□ -1.18
UFD1-209ENST00000489406 FAM19A3Q7Z5A8 133 aa7.7□□□□□ -1.18
UFD1-209ENST00000489406 COX7B2Q8TF08 81 aa7.7□□□□□ -1.18
UFD1-209ENST00000489406 CKS2P33552 79 aa7.69□□□□□ -1.18
UFD1-209ENST00000489406 PFN2P35080 140 aa7.69□□□□□ -1.18
UFD1-209ENST00000489406 CT83Q5H943 113 aa7.69□□□□□ -1.18
UFD1-209ENST00000489406 C9orf153Q5TBE3 101 aa7.69□□□□□ -1.18
UFD1-209ENST00000489406 FAM104BQ5XKR9 115 aa7.69□□□□□ -1.18
UFD1-209ENST00000489406 VCX2Q9H322 139 aa7.69□□□□□ -1.18
UFD1-209ENST00000489406 LINC00862A6NCI5 91 aa7.68□□□□□ -1.18
UFD1-209ENST00000489406 HERVK_113P63121 156 aa7.68□□□□□ -1.18
UFD1-209ENST00000489406 RIGQ13278 110 aa7.68□□□□□ -1.18
UFD1-209ENST00000489406 C2orf66Q6UXQ4 117 aa7.68□□□□□ -1.18
UFD1-209ENST00000489406 AMELXQ99217 191 aa7.68□□□□□ -1.18
UFD1-209ENST00000489406 SND1-IT1Q9HBX3 110 aa7.68□□□□□ -1.18
UFD1-209ENST00000489406 C20orf202A1L168 122 aa7.67□□□□□ -1.18
UFD1-209ENST00000489406 ARPC5O15511 151 aa7.67□□□□□ -1.18
UFD1-209ENST00000489406 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
UFD1-209ENST00000489406 SMIM1B2RUZ4 78 aa7.66□□□□□ -1.18
UFD1-209ENST00000489406 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
UFD1-209ENST00000489406 RAB5AP20339 215 aa7.66□□□□□ -1.18
UFD1-209ENST00000489406 NPYP01303 97 aa7.65□□□□□ -1.18
UFD1-209ENST00000489406 HRCT1Q6UXD1 115 aa7.65□□□□□ -1.18
UFD1-209ENST00000489406 ERC2-IT1O76042 136 aa7.64□□□□□ -1.19
UFD1-209ENST00000489406 CHTOPQ9Y3Y2 248 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms