RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 C2orf82Q6UX34 121 aa6.66□□□□□ -1.34
USP11-211ENST00000489111 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
USP11-211ENST00000489111 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
USP11-211ENST00000489111 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 USP17L23D6RBM5 183 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 EREGO14944 169 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 PTTG1IPP53801 180 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 BVES-AS1Q5T3Y7 98 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 Q6ZVH6 145 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 CEND1Q8N111 149 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 SNHG12Q9BXW3 62 aa6.65□□□□□ -1.34
USP11-211ENST00000489111 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 A6NJY4 79 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 M0R2N4 97 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 LINC00158P58513 81 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 C6orf223Q8N319 242 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 NTN5Q8WTR8 489 aaPredicted RBP6.64□□□□□ -1.35
USP11-211ENST00000489111 COPS9Q8WXC6 57 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 LINC00476Q8WZB0 136 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 LINC00526Q96FQ7 95 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 LITAFQ99732 161 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 SPANXCQ9NY87 97 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 ERG28Q9UKR5 140 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 TGP01266 2768 aa6.64□□□□□ -1.35
USP11-211ENST00000489111 DYNC2H1Q8NCM8 4307 aaKnown RBP6.64□□□□□ -1.35
USP11-211ENST00000489111 A6NDN8 102 aa6.63□□□□□ -1.35
USP11-211ENST00000489111 F8WDY8 70 aa6.63□□□□□ -1.35
USP11-211ENST00000489111 PFN2P35080 140 aa6.63□□□□□ -1.35
USP11-211ENST00000489111 DNAH7Q8WXX0 4024 aa6.63□□□□□ -1.35
USP11-211ENST00000489111 LECT2O14960 151 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 IFITM1P13164 125 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 FXYD2P54710 66 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 NPC2P61916 151 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
USP11-211ENST00000489111 COL5A1-AS1Q5SY13 56 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 UNQ6190/PRO20217Q6UXQ8 127 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 DAND5Q8N907 189 aa6.62□□□□□ -1.35
USP11-211ENST00000489111 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
USP11-211ENST00000489111 SYCNQ0VAF6 134 aa6.61□□□□□ -1.35
USP11-211ENST00000489111 COX17Q14061 63 aa6.61□□□□□ -1.35
USP11-211ENST00000489111 C14orf177Q52M58 125 aa6.61□□□□□ -1.35
USP11-211ENST00000489111 C10orf25Q5T742 122 aa6.61□□□□□ -1.35
USP11-211ENST00000489111 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
USP11-211ENST00000489111 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
USP11-211ENST00000489111 TENM2Q9NT68 2774 aa6.6□□□□□ -1.35
USP11-211ENST00000489111 LBHQ53QV2 105 aaPredicted RBP6.6□□□□□ -1.35
USP11-211ENST00000489111 C9orf116Q5BN46 136 aaPredicted RBP6.6□□□□□ -1.35
USP11-211ENST00000489111 Q6ZR54 194 aa6.6□□□□□ -1.35
USP11-211ENST00000489111 Q6ZRU5 148 aa6.6□□□□□ -1.35
USP11-211ENST00000489111 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
USP11-211ENST00000489111 CARD19Q96LW7 228 aa6.6□□□□□ -1.35
USP11-211ENST00000489111 NHP2Q9NX24 153 aaKnown RBP6.6□□□□□ -1.35
USP11-211ENST00000489111 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
USP11-211ENST00000489111 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
USP11-211ENST00000489111 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.59□□□□□ -1.35
USP11-211ENST00000489111 STARD9Q9P2P6 4700 aa6.58□□□□□ -1.36
USP11-211ENST00000489111 A4D1N5 150 aa6.58□□□□□ -1.36
USP11-211ENST00000489111 C1orf134Q5TEV5 83 aa6.58□□□□□ -1.36
USP11-211ENST00000489111 K7ERJ3 54 aa6.57□□□□□ -1.36
USP11-211ENST00000489111 WFDC2Q14508 124 aa6.57□□□□□ -1.36
USP11-211ENST00000489111 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
USP11-211ENST00000489111 RAB37Q96AX2 223 aa6.57□□□□□ -1.36
USP11-211ENST00000489111 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
USP11-211ENST00000489111 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
USP11-211ENST00000489111 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
USP11-211ENST00000489111 SND1-IT1Q9HBX3 110 aa6.56□□□□□ -1.36
USP11-211ENST00000489111 A0A1B0GWB2 263 aa6.55□□□□□ -1.36
USP11-211ENST00000489111 NDUFC2-KCTD14E9PQ53 114 aa6.55□□□□□ -1.36
USP11-211ENST00000489111 EIF4EBP3O60516 100 aaPredicted RBP6.55□□□□□ -1.36
USP11-211ENST00000489111 RPL18AQ02543 176 aaKnown RBP6.55□□□□□ -1.36
USP11-211ENST00000489111 PLECQ15149 4684 aaKnown RBP6.55□□□□□ -1.36
USP11-211ENST00000489111 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.54□□□□□ -1.36
USP11-211ENST00000489111 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
USP11-211ENST00000489111 LRCOL1A6NCL2 159 aa6.54□□□□□ -1.36
USP11-211ENST00000489111 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
USP11-211ENST00000489111 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 SLPIP03973 132 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 CFC1P0CG37 223 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 GAGE2EQ4V326 116 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 PRO1854Q9UHT4 67 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 PKIGQ9Y2B9 76 aa6.53□□□□□ -1.36
USP11-211ENST00000489111 A0A087WTM6 91 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 LOC107984156A0A0G2JMH3 177 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 LOC107984640A0A0U1RRK4 108 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 Q1RN00 199 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 ARL17AQ8IVW1 177 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 Q8N814 137 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 XAGE1AQ9HD64 81 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 PGPEP1Q9NXJ5 209 aa6.52□□□□□ -1.37
USP11-211ENST00000489111 TRAV13-2A0A0B4J235 113 aa6.51□□□□□ -1.37
USP11-211ENST00000489111 LCE6AA0A183 80 aa6.51□□□□□ -1.37
USP11-211ENST00000489111 H7C2G1 150 aa6.51□□□□□ -1.37
USP11-211ENST00000489111 TLX1NBP0CAT3 122 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms