RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 APCP25054 2843 aa11.5□□□□□ -0.57
MCF2L-229ENST00000488765 IGLV5-39A0A0G2JS06 123 aa11.5□□□□□ -0.57
MCF2L-229ENST00000488765 CCL18P55774 89 aa11.49□□□□□ -0.57
MCF2L-229ENST00000488765 M0R2N4 97 aa11.48□□□□□ -0.57
MCF2L-229ENST00000488765 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
MCF2L-229ENST00000488765 V9GYY9 64 aa11.48□□□□□ -0.57
MCF2L-229ENST00000488765 ZNF469Q96JG9 3925 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-229ENST00000488765 C16orf95Q9H693 158 aa11.47□□□□□ -0.57
MCF2L-229ENST00000488765 MOB4Q9Y3A3 225 aa11.47□□□□□ -0.57
MCF2L-229ENST00000488765 CCKP06307 115 aa11.47□□□□□ -0.57
MCF2L-229ENST00000488765 KHDC1LQ5JSQ8 128 aa11.47□□□□□ -0.57
MCF2L-229ENST00000488765 SERP1Q9Y6X1 66 aa11.47□□□□□ -0.57
MCF2L-229ENST00000488765 A8MTW9 85 aa11.47□□□□□ -0.57
MCF2L-229ENST00000488765 LRCOL1A6NCL2 159 aa11.46□□□□□ -0.57
MCF2L-229ENST00000488765 KRTAP10-9P60411 292 aa11.46□□□□□ -0.57
MCF2L-229ENST00000488765 C1orf195Q5TG92 126 aa11.46□□□□□ -0.57
MCF2L-229ENST00000488765 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
MCF2L-229ENST00000488765 IGHV4-59P01825 116 aa11.45□□□□□ -0.58
MCF2L-229ENST00000488765 DEFB131AP59861 70 aa11.45□□□□□ -0.58
MCF2L-229ENST00000488765 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
MCF2L-229ENST00000488765 MSMBP08118 114 aa11.45□□□□□ -0.58
MCF2L-229ENST00000488765 IL17DQ8TAD2 202 aa11.44□□□□□ -0.58
MCF2L-229ENST00000488765 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
MCF2L-229ENST00000488765 TRBV7-6A0A0J9YX20 115 aa11.43□□□□□ -0.58
MCF2L-229ENST00000488765 FAM229BQ4G0N7 80 aa11.43□□□□□ -0.58
MCF2L-229ENST00000488765 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
MCF2L-229ENST00000488765 UBE2E2Q96LR5 201 aa11.43□□□□□ -0.58
MCF2L-229ENST00000488765 UBL5Q9BZL1 73 aa11.43□□□□□ -0.58
MCF2L-229ENST00000488765 FLNBO75369 2602 aaKnown RBP11.42□□□□□ -0.58
MCF2L-229ENST00000488765 NTM-AS1Q6ZSK4 140 aa11.42□□□□□ -0.58
MCF2L-229ENST00000488765 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
MCF2L-229ENST00000488765 TRGV1A0A0A0MS02 117 aa11.41□□□□□ -0.58
MCF2L-229ENST00000488765 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
MCF2L-229ENST00000488765 TM2D3Q9BRN9 247 aa11.41□□□□□ -0.58
MCF2L-229ENST00000488765 H0YGX0 51 aa11.4□□□□□ -0.58
MCF2L-229ENST00000488765 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
MCF2L-229ENST00000488765 SMIM26A0A096LP01 95 aa11.4□□□□□ -0.58
MCF2L-229ENST00000488765 A0A087WZ39 114 aa11.39□□□□□ -0.59
MCF2L-229ENST00000488765 DAD1P61803 113 aa11.39□□□□□ -0.59
MCF2L-229ENST00000488765 DEFB136Q30KP8 78 aa11.39□□□□□ -0.59
MCF2L-229ENST00000488765 PRB2P02812 416 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-229ENST00000488765 USMG5Q96IX5 58 aa11.39□□□□□ -0.59
MCF2L-229ENST00000488765 K7EQG2 157 aa11.38□□□□□ -0.59
MCF2L-229ENST00000488765 B4DSR2 109 aa11.38□□□□□ -0.59
MCF2L-229ENST00000488765 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
MCF2L-229ENST00000488765 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 UBE2L6O14933 153 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 SPATA3Q8NHX4 192 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 CLPSL2Q6UWE3 100 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 CDC42SE2Q9NRR3 84 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 LAMTOR3Q9UHA4 124 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 TENM4Q6N022 2769 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 CR1P17927 2039 aa11.37□□□□□ -0.59
MCF2L-229ENST00000488765 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
MCF2L-229ENST00000488765 PF4P02776 101 aa11.36□□□□□ -0.59
MCF2L-229ENST00000488765 ZNF843Q8N446 348 aa11.35□□□□□ -0.59
MCF2L-229ENST00000488765 OVOL2Q9BRP0 275 aa11.35□□□□□ -0.59
MCF2L-229ENST00000488765 Q8N9L7 120 aa11.35□□□□□ -0.59
MCF2L-229ENST00000488765 KLK9Q2XQG4 91 aa11.35□□□□□ -0.59
MCF2L-229ENST00000488765 TRAV7A0A075B6U4 112 aa11.34□□□□□ -0.59
MCF2L-229ENST00000488765 Q8N3U1 123 aa11.34□□□□□ -0.59
MCF2L-229ENST00000488765 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.59
MCF2L-229ENST00000488765 LINC01547P58512 204 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-229ENST00000488765 UBR5O95071 2799 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-229ENST00000488765 PLA2G2AP14555 144 aa11.32□□□□□ -0.6
MCF2L-229ENST00000488765 IGLV4-60A0A075B6I1 120 aa11.32□□□□□ -0.6
MCF2L-229ENST00000488765 Q8N814 137 aa11.32□□□□□ -0.6
MCF2L-229ENST00000488765 A0A096LNT2 108 aa11.31□□□□□ -0.6
MCF2L-229ENST00000488765 C18orf65Q6ZTR6 163 aa11.3□□□□□ -0.6
MCF2L-229ENST00000488765 A0A1W2PRX2 142 aa11.3□□□□□ -0.6
MCF2L-229ENST00000488765 A6NDX4 124 aa11.3□□□□□ -0.6
MCF2L-229ENST00000488765 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-229ENST00000488765 C6orf99Q4VX62 202 aa11.29□□□□□ -0.6
MCF2L-229ENST00000488765 UNC79Q9P2D8 2635 aa11.28□□□□□ -0.6
MCF2L-229ENST00000488765 EPM2AB3EWF7 344 aa11.28□□□□□ -0.6
MCF2L-229ENST00000488765 JMJD7-PLA2G4BH0Y9G9 81 aa11.28□□□□□ -0.6
MCF2L-229ENST00000488765 LINC01356Q8N9X3 169 aa11.28□□□□□ -0.6
MCF2L-229ENST00000488765 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
MCF2L-229ENST00000488765 TMEM256-PLSCR3K7ERE1 68 aa11.28□□□□□ -0.6
MCF2L-229ENST00000488765 Q6ZVQ6 151 aa11.28□□□□□ -0.6
MCF2L-229ENST00000488765 SLURP1P55000 103 aa11.27□□□□□ -0.61
MCF2L-229ENST00000488765 KLKP1Q107X0 134 aa11.27□□□□□ -0.61
MCF2L-229ENST00000488765 TRBV10-1A0A0K0K1A3 114 aa11.27□□□□□ -0.61
MCF2L-229ENST00000488765 MIFP14174 115 aa11.27□□□□□ -0.61
MCF2L-229ENST00000488765 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
MCF2L-229ENST00000488765 K7EMT4 169 aa11.26□□□□□ -0.61
MCF2L-229ENST00000488765 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
MCF2L-229ENST00000488765 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-229ENST00000488765 NANOS2P60321 138 aaKnown RBP11.24□□□□□ -0.61
MCF2L-229ENST00000488765 ATP5EP2Q5VTU8 51 aa11.24□□□□□ -0.61
MCF2L-229ENST00000488765 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
MCF2L-229ENST00000488765 K7EQD1 137 aa11.23□□□□□ -0.61
MCF2L-229ENST00000488765 A0A096LPF7 62 aa11.22□□□□□ -0.61
MCF2L-229ENST00000488765 PRR4Q16378 134 aa11.21□□□□□ -0.62
MCF2L-229ENST00000488765 Q6ZQT0 140 aa11.21□□□□□ -0.62
MCF2L-229ENST00000488765 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
MCF2L-229ENST00000488765 IGLV10-54A0A075B6I4 117 aa11.2□□□□□ -0.62
MCF2L-229ENST00000488765 TRGV2A0A075B6R0 118 aa11.2□□□□□ -0.62
MCF2L-229ENST00000488765 PSPHP1O15172 72 aa11.2□□□□□ -0.62
MCF2L-229ENST00000488765 TMEM254Q8TBM7 123 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms