RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 PEA15Q15121 130 aa11.17□□□□□ -0.62
GGPS1-206ENST00000488594 C2orf66Q6UXQ4 117 aa11.17□□□□□ -0.62
GGPS1-206ENST00000488594 FAM19A3Q7Z5A8 133 aa11.17□□□□□ -0.62
GGPS1-206ENST00000488594 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
GGPS1-206ENST00000488594 SEC11AP67812 179 aa11.16□□□□□ -0.62
GGPS1-206ENST00000488594 LOC389332A0A1B0GUA5 103 aa11.16□□□□□ -0.62
GGPS1-206ENST00000488594 HERVK_113P63121 156 aa11.16□□□□□ -0.62
GGPS1-206ENST00000488594 ZC2HC1BQ5TFG8 222 aa11.16□□□□□ -0.62
GGPS1-206ENST00000488594 CXCL5P42830 114 aa11.15□□□□□ -0.63
GGPS1-206ENST00000488594 ORMDL2Q53FV1 153 aa11.15□□□□□ -0.63
GGPS1-206ENST00000488594 Q8N8P6 123 aa11.15□□□□□ -0.63
GGPS1-206ENST00000488594 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.63
GGPS1-206ENST00000488594 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.63
GGPS1-206ENST00000488594 K7EMI3 77 aa11.14□□□□□ -0.63
GGPS1-206ENST00000488594 PAPPA-AS1Q5QFB9 102 aa11.14□□□□□ -0.63
GGPS1-206ENST00000488594 IGIPA6NJ69 53 aa11.13□□□□□ -0.63
GGPS1-206ENST00000488594 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
GGPS1-206ENST00000488594 SRSF3P84103 164 aaKnown RBP11.12□□□□□ -0.63
GGPS1-206ENST00000488594 LINC00167Q96N53 147 aa11.12□□□□□ -0.63
GGPS1-206ENST00000488594 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
GGPS1-206ENST00000488594 RPL37AP8A6NKH3 93 aa11.11□□□□□ -0.63
GGPS1-206ENST00000488594 FAM229BQ4G0N7 80 aa11.11□□□□□ -0.63
GGPS1-206ENST00000488594 KRTAP9-6A0A140TA67 174 aa11.1□□□□□ -0.63
GGPS1-206ENST00000488594 G0S2P27469 103 aa11.1□□□□□ -0.63
GGPS1-206ENST00000488594 TPRXLQ17RH7 258 aa11.1□□□□□ -0.63
GGPS1-206ENST00000488594 LINC00304Q8N9R0 145 aa11.1□□□□□ -0.63
GGPS1-206ENST00000488594 CDIP1Q9H305 208 aa11.1□□□□□ -0.63
GGPS1-206ENST00000488594 ANAPC11Q9NYG5 84 aa11.1□□□□□ -0.63
GGPS1-206ENST00000488594 FAT4Q6V0I7 4981 aa11.1□□□□□ -0.63
GGPS1-206ENST00000488594 hCG_2014768A0A024R1R8 64 aa11.09□□□□□ -0.63
GGPS1-206ENST00000488594 UBE2AP49459 152 aa11.09□□□□□ -0.63
GGPS1-206ENST00000488594 CTAG1AP78358 180 aa11.09□□□□□ -0.63
GGPS1-206ENST00000488594 KRTAP13-2Q52LG2 175 aa11.09□□□□□ -0.63
GGPS1-206ENST00000488594 RETNLBQ9BQ08 111 aa11.09□□□□□ -0.63
GGPS1-206ENST00000488594 KRTAP13-1Q8IUC0 172 aa11.08□□□□□ -0.64
GGPS1-206ENST00000488594 TIMM17AQ99595 171 aa11.07□□□□□ -0.64
GGPS1-206ENST00000488594 NXT2Q9NPJ8 142 aaKnown RBP11.07□□□□□ -0.64
GGPS1-206ENST00000488594 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
GGPS1-206ENST00000488594 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
GGPS1-206ENST00000488594 IGLV7-46A0A075B6I9 117 aa11.04□□□□□ -0.64
GGPS1-206ENST00000488594 IGKV2D-26A0A0A0MRZ7 120 aa11.04□□□□□ -0.64
GGPS1-206ENST00000488594 SMIM1B2RUZ4 78 aa11.04□□□□□ -0.64
GGPS1-206ENST00000488594 PDZD11Q5EBL8 140 aa11.04□□□□□ -0.64
GGPS1-206ENST00000488594 NKAPP1Q8N9T2 125 aa11.04□□□□□ -0.64
GGPS1-206ENST00000488594 PNRC1Q12796 327 aaPredicted RBP11.03□□□□□ -0.64
GGPS1-206ENST00000488594 COX7B2Q8TF08 81 aa11.03□□□□□ -0.64
GGPS1-206ENST00000488594 TOMM6Q96B49 74 aa11.03□□□□□ -0.64
GGPS1-206ENST00000488594 TINCRA0A1B0GVN0 87 aa11.01□□□□□ -0.65
GGPS1-206ENST00000488594 ERASQ7Z444 233 aa11.01□□□□□ -0.65
GGPS1-206ENST00000488594 IGLV5-45A0A087WSX0 123 aa11□□□□□ -0.65
GGPS1-206ENST00000488594 MT-ND4LP03901 98 aa10.99□□□□□ -0.65
GGPS1-206ENST00000488594 RAB5BP61020 215 aa10.99□□□□□ -0.65
GGPS1-206ENST00000488594 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
GGPS1-206ENST00000488594 IGKV2-28A0A075B6P5 120 aa10.98□□□□□ -0.65
GGPS1-206ENST00000488594 IGKV2D-28P01615 120 aa10.98□□□□□ -0.65
GGPS1-206ENST00000488594 SCGB3A1Q96QR1 104 aa10.98□□□□□ -0.65
GGPS1-206ENST00000488594 ATP5LO75964 103 aa10.97□□□□□ -0.65
GGPS1-206ENST00000488594 LINC01549A6NIU2 74 aa10.96□□□□□ -0.65
GGPS1-206ENST00000488594 PRLHP81277 87 aa10.96□□□□□ -0.65
GGPS1-206ENST00000488594 PPDPFQ9H3Y8 114 aa10.96□□□□□ -0.65
GGPS1-206ENST00000488594 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
GGPS1-206ENST00000488594 MRPL18Q9H0U6 180 aaKnown RBP10.94□□□□□ -0.66
GGPS1-206ENST00000488594 SCO1O75880 301 aa10.93□□□□□ -0.66
GGPS1-206ENST00000488594 SPINK8P0C7L1 97 aa10.93□□□□□ -0.66
GGPS1-206ENST00000488594 SPAG11AQ6PDA7 123 aa10.93□□□□□ -0.66
GGPS1-206ENST00000488594 TMEM126AQ9H061 195 aa10.93□□□□□ -0.66
GGPS1-206ENST00000488594 CST9LQ9H4G1 147 aa10.93□□□□□ -0.66
GGPS1-206ENST00000488594 MUC17Q685J3 4493 aa10.93□□□□□ -0.66
GGPS1-206ENST00000488594 ADCYAP1P18509 176 aa10.92□□□□□ -0.66
GGPS1-206ENST00000488594 H3BRM9 83 aa10.91□□□□□ -0.66
GGPS1-206ENST00000488594 PLEKHB2Q96CS7 222 aa10.91□□□□□ -0.66
GGPS1-206ENST00000488594 GNB1LQ9BYB4 327 aa10.91□□□□□ -0.66
GGPS1-206ENST00000488594 VPREB1P12018 145 aa10.9□□□□□ -0.66
GGPS1-206ENST00000488594 PFN2P35080 140 aa10.9□□□□□ -0.66
GGPS1-206ENST00000488594 RPL24P83731 157 aaKnown RBP10.9□□□□□ -0.66
GGPS1-206ENST00000488594 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
GGPS1-206ENST00000488594 TMEM238C9JI98 176 aa10.9□□□□□ -0.67
GGPS1-206ENST00000488594 PMVKQ15126 192 aa10.9□□□□□ -0.67
GGPS1-206ENST00000488594 M0R378 163 aa10.89□□□□□ -0.67
GGPS1-206ENST00000488594 CBLN2Q8IUK8 224 aa10.89□□□□□ -0.67
GGPS1-206ENST00000488594 C3orf22Q8N5N4 141 aa10.89□□□□□ -0.67
GGPS1-206ENST00000488594 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
GGPS1-206ENST00000488594 KIAA1644Q3SXP7 199 aa10.88□□□□□ -0.67
GGPS1-206ENST00000488594 LINC01546A6NGU7 62 aa10.87□□□□□ -0.67
GGPS1-206ENST00000488594 COX17Q14061 63 aa10.87□□□□□ -0.67
GGPS1-206ENST00000488594 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
GGPS1-206ENST00000488594 ERG28Q9UKR5 140 aa10.86□□□□□ -0.67
GGPS1-206ENST00000488594 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
GGPS1-206ENST00000488594 C4orf48Q5BLP8 95 aa10.85□□□□□ -0.67
GGPS1-206ENST00000488594 HIGD2AQ9BW72 106 aa10.85□□□□□ -0.67
GGPS1-206ENST00000488594 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
GGPS1-206ENST00000488594 IGLC3P0DOY3 106 aa10.82□□□□□ -0.68
GGPS1-206ENST00000488594 RAB14P61106 215 aa10.82□□□□□ -0.68
GGPS1-206ENST00000488594 ASB16-AS1Q495Z4 193 aa10.82□□□□□ -0.68
GGPS1-206ENST00000488594 SFTA2Q6UW10 78 aa10.82□□□□□ -0.68
GGPS1-206ENST00000488594 SPRR4Q96PI1 79 aa10.82□□□□□ -0.68
GGPS1-206ENST00000488594 ZNF706Q9Y5V0 76 aaPredicted RBP10.82□□□□□ -0.68
GGPS1-206ENST00000488594 TRAV9-1A0A075B6T8 112 aa10.81□□□□□ -0.68
GGPS1-206ENST00000488594 KRTAP13-3Q3SY46 172 aa10.81□□□□□ -0.68
GGPS1-206ENST00000488594 FA2HQ7L5A8 372 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms