RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
COL9A2-208ENST00000488463 IFI27L1Q96BM0 104 aa8.93□□□□□ -0.98
COL9A2-208ENST00000488463 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
COL9A2-208ENST00000488463 PDZD11Q5EBL8 140 aa8.92□□□□□ -0.98
COL9A2-208ENST00000488463 C10orf25Q5T742 122 aa8.92□□□□□ -0.98
COL9A2-208ENST00000488463 ORAOV1Q8WV07 137 aa8.92□□□□□ -0.98
COL9A2-208ENST00000488463 CAMK2N2Q96S95 79 aa8.92□□□□□ -0.98
COL9A2-208ENST00000488463 PTTG1IPP53801 180 aa8.91□□□□□ -0.98
COL9A2-208ENST00000488463 RNF151Q2KHN1 245 aa8.91□□□□□ -0.98
COL9A2-208ENST00000488463 STPG4Q8N801 248 aa8.91□□□□□ -0.98
COL9A2-208ENST00000488463 DPH3Q96FX2 82 aa8.91□□□□□ -0.98
COL9A2-208ENST00000488463 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
COL9A2-208ENST00000488463 F8WDY8 70 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 AKR1D1P51857 326 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 LINC00310P59036 64 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 SEC11AP67812 179 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 PMVKQ15126 192 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 LINC01561Q8N1V8 128 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 HIST3H2BBQ8N257 126 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 MRPL35Q9NZE8 188 aaKnown RBP8.9□□□□□ -0.98
COL9A2-208ENST00000488463 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.98
COL9A2-208ENST00000488463 TNXBP22105 4242 aa8.89□□□□□ -0.99
COL9A2-208ENST00000488463 A0A096LNJ9 63 aa8.89□□□□□ -0.99
COL9A2-208ENST00000488463 UNQ6190/PRO20217Q6UXQ8 127 aa8.89□□□□□ -0.99
COL9A2-208ENST00000488463 PKIGQ9Y2B9 76 aa8.89□□□□□ -0.99
COL9A2-208ENST00000488463 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
COL9A2-208ENST00000488463 C6orf48Q9UBA6 75 aa8.88□□□□□ -0.99
COL9A2-208ENST00000488463 C20orf202A1L168 122 aa8.87□□□□□ -0.99
COL9A2-208ENST00000488463 GAGE2BQ13066 116 aa8.87□□□□□ -0.99
COL9A2-208ENST00000488463 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 H0Y8G0 127 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 NDUFA1O15239 70 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 TLX1NBP0CAT3 122 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 KRTDAPP60985 99 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 HIST1H2BLQ99880 126 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 GEMIN7Q9H840 131 aaKnown RBP8.86□□□□□ -0.99
COL9A2-208ENST00000488463 CDKN2A-AS1Q9UH64 79 aa8.86□□□□□ -0.99
COL9A2-208ENST00000488463 PET117Q6UWS5 81 aa8.85□□□□□ -0.99
COL9A2-208ENST00000488463 CHTOPQ9Y3Y2 248 aaKnown RBP8.85□□□□□ -0.99
COL9A2-208ENST00000488463 HERVK_113P63121 156 aa8.84□□□□□ -0.99
COL9A2-208ENST00000488463 PRR3P79522 188 aaKnown RBP8.84□□□□□ -0.99
COL9A2-208ENST00000488463 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
COL9A2-208ENST00000488463 Q6ZRP5 223 aa8.84□□□□□ -0.99
COL9A2-208ENST00000488463 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
COL9A2-208ENST00000488463 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
COL9A2-208ENST00000488463 IGLV5-45A0A087WSX0 123 aa8.83□□□□□ -1
COL9A2-208ENST00000488463 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
COL9A2-208ENST00000488463 OXTP01178 125 aa8.83□□□□□ -1
COL9A2-208ENST00000488463 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
COL9A2-208ENST00000488463 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
COL9A2-208ENST00000488463 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
COL9A2-208ENST00000488463 TINCRA0A1B0GVN0 87 aa8.82□□□□□ -1
COL9A2-208ENST00000488463 C3orf79P0CE67 100 aa8.82□□□□□ -1
COL9A2-208ENST00000488463 PLNP26678 52 aa8.82□□□□□ -1
COL9A2-208ENST00000488463 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
COL9A2-208ENST00000488463 H3BRM9 83 aa8.81□□□□□ -1
COL9A2-208ENST00000488463 J3QL48 77 aa8.81□□□□□ -1
COL9A2-208ENST00000488463 Q8IZM0 81 aa8.81□□□□□ -1
COL9A2-208ENST00000488463 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
COL9A2-208ENST00000488463 F8VRH5 84 aa8.8□□□□□ -1
COL9A2-208ENST00000488463 FAM168BA1KXE4 195 aa8.79□□□□□ -1
COL9A2-208ENST00000488463 DPM2O94777 84 aa8.79□□□□□ -1
COL9A2-208ENST00000488463 SCGB1D1O95968 90 aa8.79□□□□□ -1
COL9A2-208ENST00000488463 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
COL9A2-208ENST00000488463 IGKCP01834 107 aa8.78□□□□□ -1
COL9A2-208ENST00000488463 MT1HL1P0DM35 61 aa8.78□□□□□ -1
COL9A2-208ENST00000488463 IGLC3P0DOY3 106 aa8.78□□□□□ -1
COL9A2-208ENST00000488463 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
COL9A2-208ENST00000488463 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
COL9A2-208ENST00000488463 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
COL9A2-208ENST00000488463 HERVK_113P61574 105 aa8.77□□□□□ -1.01
COL9A2-208ENST00000488463 SRSF9Q13242 221 aaKnown RBP eCLIP8.77□□□□□ -1.01
COL9A2-208ENST00000488463 ODF1Q14990 250 aa8.77□□□□□ -1.01
COL9A2-208ENST00000488463 GAGE2EQ4V326 116 aa8.77□□□□□ -1.01
COL9A2-208ENST00000488463 C6orf226Q5I0X4 101 aa8.77□□□□□ -1.01
COL9A2-208ENST00000488463 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
COL9A2-208ENST00000488463 LINC01545Q5VT33 79 aa8.77□□□□□ -1.01
COL9A2-208ENST00000488463 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
COL9A2-208ENST00000488463 GAGE2DQ9UEU5 116 aa8.77□□□□□ -1.01
COL9A2-208ENST00000488463 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
COL9A2-208ENST00000488463 PRSS2P07478 247 aa8.76□□□□□ -1.01
COL9A2-208ENST00000488463 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
COL9A2-208ENST00000488463 CKS1BP61024 79 aa8.75□□□□□ -1.01
COL9A2-208ENST00000488463 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
COL9A2-208ENST00000488463 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
COL9A2-208ENST00000488463 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
COL9A2-208ENST00000488463 COX7B2Q8TF08 81 aa8.74□□□□□ -1.01
COL9A2-208ENST00000488463 PMCHL2Q9BQD1 86 aa8.74□□□□□ -1.01
COL9A2-208ENST00000488463 UBR4Q5T4S7 5183 aa8.74□□□□□ -1.01
COL9A2-208ENST00000488463 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
COL9A2-208ENST00000488463 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
COL9A2-208ENST00000488463 CXCL5P42830 114 aa8.72□□□□□ -1.01
COL9A2-208ENST00000488463 JOSD1Q15040 202 aaPredicted RBP8.72□□□□□ -1.01
COL9A2-208ENST00000488463 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
COL9A2-208ENST00000488463 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
COL9A2-208ENST00000488463 SPINK6Q6UWN8 80 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms