RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CST9LQ9H4G1 147 aa13.98□□□□□ -0.17
CDHR3-212ENST00000487084 LRP1Q07954 4544 aaKnown RBP13.98□□□□□ -0.17
CDHR3-212ENST00000487084 TINCRA0A1B0GVN0 87 aa13.97□□□□□ -0.17
CDHR3-212ENST00000487084 OXTP01178 125 aa13.97□□□□□ -0.17
CDHR3-212ENST00000487084 TLX1NBP0CAT3 122 aa13.97□□□□□ -0.17
CDHR3-212ENST00000487084 PMVKQ15126 192 aa13.97□□□□□ -0.17
CDHR3-212ENST00000487084 PMCHL1Q16048 86 aa13.97□□□□□ -0.17
CDHR3-212ENST00000487084 Q8IZM0 81 aa13.97□□□□□ -0.17
CDHR3-212ENST00000487084 YPEL4Q96NS1 127 aa13.97□□□□□ -0.17
CDHR3-212ENST00000487084 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.17
CDHR3-212ENST00000487084 A0A096LNJ9 63 aa13.95□□□□□ -0.18
CDHR3-212ENST00000487084 HBDP02042 147 aa13.95□□□□□ -0.18
CDHR3-212ENST00000487084 NDUFA6P56556 154 aa13.95□□□□□ -0.18
CDHR3-212ENST00000487084 RAB5BP61020 215 aa13.95□□□□□ -0.18
CDHR3-212ENST00000487084 SLC7A5P1Q8MH63 180 aa13.95□□□□□ -0.18
CDHR3-212ENST00000487084 FAT3Q8TDW7 4589 aa13.94□□□□□ -0.18
CDHR3-212ENST00000487084 FAM168BA1KXE4 195 aa13.93□□□□□ -0.18
CDHR3-212ENST00000487084 SMIM1B2RUZ4 78 aa13.93□□□□□ -0.18
CDHR3-212ENST00000487084 PHF5AQ7RTV0 110 aaKnown RBP13.93□□□□□ -0.18
CDHR3-212ENST00000487084 NDUFC2-KCTD14E9PQ53 114 aa13.92□□□□□ -0.18
CDHR3-212ENST00000487084 FAM19A5Q7Z5A7 132 aaPredicted RBP13.92□□□□□ -0.18
CDHR3-212ENST00000487084 IGLV5-45A0A087WSX0 123 aa13.91□□□□□ -0.18
CDHR3-212ENST00000487084 SPINK8P0C7L1 97 aa13.91□□□□□ -0.18
CDHR3-212ENST00000487084 PDZD11Q5EBL8 140 aa13.9□□□□□ -0.18
CDHR3-212ENST00000487084 F8VRH5 84 aa13.89□□□□□ -0.19
CDHR3-212ENST00000487084 CXCL5P42830 114 aa13.89□□□□□ -0.19
CDHR3-212ENST00000487084 COX7B2Q8TF08 81 aa13.89□□□□□ -0.19
CDHR3-212ENST00000487084 H3BRM9 83 aa13.87□□□□□ -0.19
CDHR3-212ENST00000487084 ATP5LO75964 103 aa13.87□□□□□ -0.19
CDHR3-212ENST00000487084 IGLC3P0DOY3 106 aa13.86□□□□□ -0.19
CDHR3-212ENST00000487084 C9orf129Q5T035 196 aaKnown RBP13.86□□□□□ -0.19
CDHR3-212ENST00000487084 PSORS1C2Q9UIG4 136 aa13.85□□□□□ -0.19
CDHR3-212ENST00000487084 M0QXV9 152 aa13.84□□□□□ -0.19
CDHR3-212ENST00000487084 BAGE3Q86Y29 109 aa13.84□□□□□ -0.19
CDHR3-212ENST00000487084 CHCHD1Q96BP2 118 aaKnown RBP13.84□□□□□ -0.19
CDHR3-212ENST00000487084 TRGC2P03986 189 aa13.82□□□□□ -0.2
CDHR3-212ENST00000487084 ZNF22P17026 224 aaPredicted RBP13.82□□□□□ -0.2
CDHR3-212ENST00000487084 C1orf137Q5JT78 98 aa13.82□□□□□ -0.2
CDHR3-212ENST00000487084 SPINK6Q6UWN8 80 aa13.82□□□□□ -0.2
CDHR3-212ENST00000487084 KRTAP7-1Q8IUC3 87 aa13.82□□□□□ -0.2
CDHR3-212ENST00000487084 XAGE1AQ9HD64 81 aa13.82□□□□□ -0.2
CDHR3-212ENST00000487084 UBE2BP63146 152 aa13.81□□□□□ -0.2
CDHR3-212ENST00000487084 C11orf86A6NJI1 115 aa13.78□□□□□ -0.2
CDHR3-212ENST00000487084 HSBP1O75506 76 aa13.78□□□□□ -0.2
CDHR3-212ENST00000487084 TMEM170BQ5T4T1 132 aa13.78□□□□□ -0.2
CDHR3-212ENST00000487084 KRTAP11-1Q8IUC1 163 aa13.78□□□□□ -0.2
CDHR3-212ENST00000487084 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
CDHR3-212ENST00000487084 CHTOPQ9Y3Y2 248 aaKnown RBP13.78□□□□□ -0.2
CDHR3-212ENST00000487084 SRSF9Q13242 221 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDHR3-212ENST00000487084 SERTAD4-AS1Q5TG53 156 aa13.77□□□□□ -0.21
CDHR3-212ENST00000487084 IGLV5-39A0A0G2JS06 123 aa13.76□□□□□ -0.21
CDHR3-212ENST00000487084 MT1HL1P0DM35 61 aa13.76□□□□□ -0.21
CDHR3-212ENST00000487084 REG3GQ6UW15 175 aa13.76□□□□□ -0.21
CDHR3-212ENST00000487084 FAM19A2Q8N3H0 131 aa13.76□□□□□ -0.21
CDHR3-212ENST00000487084 TRAV12-1A0A0B4J245 112 aa13.72□□□□□ -0.21
CDHR3-212ENST00000487084 COLCA2A8K830 154 aa13.72□□□□□ -0.21
CDHR3-212ENST00000487084 IGLV7-43P04211 117 aa13.72□□□□□ -0.21
CDHR3-212ENST00000487084 C22orf24Q9Y442 160 aa13.72□□□□□ -0.21
CDHR3-212ENST00000487084 SERF1AO75920 110 aa13.71□□□□□ -0.21
CDHR3-212ENST00000487084 PFN2P35080 140 aa13.71□□□□□ -0.21
CDHR3-212ENST00000487084 LINC01600Q96MT4 127 aa13.71□□□□□ -0.21
CDHR3-212ENST00000487084 H0Y8G0 127 aa13.7□□□□□ -0.22
CDHR3-212ENST00000487084 LBHQ53QV2 105 aaPredicted RBP13.69□□□□□ -0.22
CDHR3-212ENST00000487084 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
CDHR3-212ENST00000487084 LEPROTL1O95214 131 aa13.67□□□□□ -0.22
CDHR3-212ENST00000487084 LINC00310P59036 64 aa13.67□□□□□ -0.22
CDHR3-212ENST00000487084 SCO1O75880 301 aa13.66□□□□□ -0.22
CDHR3-212ENST00000487084 MRPL55Q7Z7F7 128 aaKnown RBP13.66□□□□□ -0.22
CDHR3-212ENST00000487084 ERG28Q9UKR5 140 aa13.66□□□□□ -0.22
CDHR3-212ENST00000487084 TMEM223A0PJW6 202 aa13.65□□□□□ -0.22
CDHR3-212ENST00000487084 DIRC1Q969H9 104 aa13.65□□□□□ -0.22
CDHR3-212ENST00000487084 TP73-AS1Q9UF72 201 aa13.65□□□□□ -0.22
CDHR3-212ENST00000487084 NUPR1O60356 82 aa13.63□□□□□ -0.23
CDHR3-212ENST00000487084 SFTA2Q6UW10 78 aa13.63□□□□□ -0.23
CDHR3-212ENST00000487084 NKAPP1Q8N9T2 125 aa13.63□□□□□ -0.23
CDHR3-212ENST00000487084 PLA2G2DQ9UNK4 145 aa13.63□□□□□ -0.23
CDHR3-212ENST00000487084 GAGE10A6NGK3 116 aa13.62□□□□□ -0.23
CDHR3-212ENST00000487084 FABP4P15090 132 aa13.62□□□□□ -0.23
CDHR3-212ENST00000487084 TNXBP22105 4242 aa13.62□□□□□ -0.23
CDHR3-212ENST00000487084 RPL37AP8A6NKH3 93 aa13.61□□□□□ -0.23
CDHR3-212ENST00000487084 ODF1Q14990 250 aa13.61□□□□□ -0.23
CDHR3-212ENST00000487084 LINC00167Q96N53 147 aa13.61□□□□□ -0.23
CDHR3-212ENST00000487084 HSPB8Q9UJY1 196 aa13.61□□□□□ -0.23
CDHR3-212ENST00000487084 H0Y9J4 135 aa13.6□□□□□ -0.23
CDHR3-212ENST00000487084 COX17Q14061 63 aa13.6□□□□□ -0.23
CDHR3-212ENST00000487084 SND1-IT1Q9HBX3 110 aa13.6□□□□□ -0.23
CDHR3-212ENST00000487084 IGLV5-37A0A075B6J1 123 aa13.57□□□□□ -0.24
CDHR3-212ENST00000487084 LINC00158P58513 81 aa13.57□□□□□ -0.24
CDHR3-212ENST00000487084 A0A0U1RRA0 63 aa13.56□□□□□ -0.24
CDHR3-212ENST00000487084 KRTAP10-8P60410 259 aa13.56□□□□□ -0.24
CDHR3-212ENST00000487084 HMCN2Q8NDA2 5059 aa13.55□□□□□ -0.24
CDHR3-212ENST00000487084 ZNF861PO60384 105 aa13.54□□□□□ -0.24
CDHR3-212ENST00000487084 PLNP26678 52 aa13.54□□□□□ -0.24
CDHR3-212ENST00000487084 PMCHL2Q9BQD1 86 aa13.54□□□□□ -0.24
CDHR3-212ENST00000487084 BCE1O60756 84 aa13.53□□□□□ -0.24
CDHR3-212ENST00000487084 HIST1H2BKO60814 126 aa13.53□□□□□ -0.24
CDHR3-212ENST00000487084 HIST1H2BJP06899 126 aa13.53□□□□□ -0.24
CDHR3-212ENST00000487084 HIST1H2BOP23527 126 aa13.53□□□□□ -0.24
CDHR3-212ENST00000487084 HIST1H2BBP33778 126 aa13.53□□□□□ -0.24
CDHR3-212ENST00000487084 HIST1H2BDP58876 126 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms