RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 PACRGQ96M98 296 aaPredicted RBP9.93□□□□□ -0.82
HDAC8-218ENST00000486704 A0A096LNJ9 63 aa9.92□□□□□ -0.82
HDAC8-218ENST00000486704 PMVKQ15126 192 aa9.92□□□□□ -0.82
HDAC8-218ENST00000486704 CST9LQ9H4G1 147 aa9.92□□□□□ -0.82
HDAC8-218ENST00000486704 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
HDAC8-218ENST00000486704 LINC00614P0C842 121 aa9.91□□□□□ -0.82
HDAC8-218ENST00000486704 LINC00469Q8N7U9 141 aa9.91□□□□□ -0.82
HDAC8-218ENST00000486704 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
HDAC8-218ENST00000486704 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.82
HDAC8-218ENST00000486704 CKS1BP61024 79 aa9.9□□□□□ -0.82
HDAC8-218ENST00000486704 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
HDAC8-218ENST00000486704 HBDP02042 147 aa9.89□□□□□ -0.83
HDAC8-218ENST00000486704 CXCL5P42830 114 aa9.89□□□□□ -0.83
HDAC8-218ENST00000486704 RAB5BP61020 215 aa9.89□□□□□ -0.83
HDAC8-218ENST00000486704 PDZD11Q5EBL8 140 aa9.89□□□□□ -0.83
HDAC8-218ENST00000486704 F8VRH5 84 aa9.88□□□□□ -0.83
HDAC8-218ENST00000486704 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
HDAC8-218ENST00000486704 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
HDAC8-218ENST00000486704 FAM168BA1KXE4 195 aa9.86□□□□□ -0.83
HDAC8-218ENST00000486704 IGLC3P0DOY3 106 aa9.86□□□□□ -0.83
HDAC8-218ENST00000486704 SPINK6Q6UWN8 80 aa9.86□□□□□ -0.83
HDAC8-218ENST00000486704 PHF5AQ7RTV0 110 aaKnown RBP9.86□□□□□ -0.83
HDAC8-218ENST00000486704 CBLN2Q8IUK8 224 aa9.86□□□□□ -0.83
HDAC8-218ENST00000486704 ATP5LO75964 103 aa9.85□□□□□ -0.83
HDAC8-218ENST00000486704 MT1HL1P0DM35 61 aa9.85□□□□□ -0.83
HDAC8-218ENST00000486704 C9orf129Q5T035 196 aaKnown RBP9.85□□□□□ -0.83
HDAC8-218ENST00000486704 FAM19A5Q7Z5A7 132 aaPredicted RBP9.85□□□□□ -0.83
HDAC8-218ENST00000486704 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
HDAC8-218ENST00000486704 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
HDAC8-218ENST00000486704 H3BRM9 83 aa9.84□□□□□ -0.83
HDAC8-218ENST00000486704 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC8-218ENST00000486704 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
HDAC8-218ENST00000486704 KRTAP7-1Q8IUC3 87 aa9.84□□□□□ -0.83
HDAC8-218ENST00000486704 CHCHD1Q96BP2 118 aaKnown RBP9.84□□□□□ -0.83
HDAC8-218ENST00000486704 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
HDAC8-218ENST00000486704 ODF1Q14990 250 aa9.83□□□□□ -0.84
HDAC8-218ENST00000486704 M0QXV9 152 aa9.82□□□□□ -0.84
HDAC8-218ENST00000486704 IGLV5-39A0A0G2JS06 123 aa9.81□□□□□ -0.84
HDAC8-218ENST00000486704 ZNF22P17026 224 aaPredicted RBP9.81□□□□□ -0.84
HDAC8-218ENST00000486704 NDUFA6P56556 154 aa9.81□□□□□ -0.84
HDAC8-218ENST00000486704 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
HDAC8-218ENST00000486704 SLC7A5P1Q8MH63 180 aa9.81□□□□□ -0.84
HDAC8-218ENST00000486704 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
HDAC8-218ENST00000486704 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
HDAC8-218ENST00000486704 C1orf137Q5JT78 98 aa9.79□□□□□ -0.84
HDAC8-218ENST00000486704 KRTAP11-1Q8IUC1 163 aa9.79□□□□□ -0.84
HDAC8-218ENST00000486704 BAGE3Q86Y29 109 aa9.78□□□□□ -0.84
HDAC8-218ENST00000486704 XAGE1AQ9HD64 81 aa9.78□□□□□ -0.84
HDAC8-218ENST00000486704 C11orf86A6NJI1 115 aa9.77□□□□□ -0.85
HDAC8-218ENST00000486704 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
HDAC8-218ENST00000486704 TRGC2P03986 189 aa9.76□□□□□ -0.85
HDAC8-218ENST00000486704 IGLV7-43P04211 117 aa9.76□□□□□ -0.85
HDAC8-218ENST00000486704 UBE2BP63146 152 aa9.76□□□□□ -0.85
HDAC8-218ENST00000486704 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
HDAC8-218ENST00000486704 TP73-AS1Q9UF72 201 aa9.76□□□□□ -0.85
HDAC8-218ENST00000486704 TNXBP22105 4242 aa9.75□□□□□ -0.85
HDAC8-218ENST00000486704 HSBP1O75506 76 aa9.75□□□□□ -0.85
HDAC8-218ENST00000486704 CHTOPQ9Y3Y2 248 aaKnown RBP9.75□□□□□ -0.85
HDAC8-218ENST00000486704 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
HDAC8-218ENST00000486704 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
HDAC8-218ENST00000486704 C22orf24Q9Y442 160 aa9.74□□□□□ -0.85
HDAC8-218ENST00000486704 HMCN2Q8NDA2 5059 aa9.73□□□□□ -0.85
HDAC8-218ENST00000486704 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-218ENST00000486704 TMEM170BQ5T4T1 132 aa9.73□□□□□ -0.85
HDAC8-218ENST00000486704 COLCA2A8K830 154 aa9.72□□□□□ -0.85
HDAC8-218ENST00000486704 LINC00310P59036 64 aa9.72□□□□□ -0.85
HDAC8-218ENST00000486704 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
HDAC8-218ENST00000486704 MRPL55Q7Z7F7 128 aaKnown RBP9.71□□□□□ -0.86
HDAC8-218ENST00000486704 FAM19A2Q8N3H0 131 aa9.71□□□□□ -0.86
HDAC8-218ENST00000486704 IGLV5-37A0A075B6J1 123 aa9.7□□□□□ -0.86
HDAC8-218ENST00000486704 H0Y9J4 135 aa9.7□□□□□ -0.86
HDAC8-218ENST00000486704 NUPR1O60356 82 aa9.7□□□□□ -0.86
HDAC8-218ENST00000486704 SERF1AO75920 110 aa9.7□□□□□ -0.86
HDAC8-218ENST00000486704 KRTAP10-8P60410 259 aa9.7□□□□□ -0.86
HDAC8-218ENST00000486704 COX17Q14061 63 aa9.7□□□□□ -0.86
HDAC8-218ENST00000486704 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
HDAC8-218ENST00000486704 TMEM223A0PJW6 202 aa9.69□□□□□ -0.86
HDAC8-218ENST00000486704 ZNF625Q96I27 306 aaPredicted RBP9.69□□□□□ -0.86
HDAC8-218ENST00000486704 LEPROTL1O95214 131 aa9.67□□□□□ -0.86
HDAC8-218ENST00000486704 PFN2P35080 140 aa9.67□□□□□ -0.86
HDAC8-218ENST00000486704 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
HDAC8-218ENST00000486704 LINC00167Q96N53 147 aa9.65□□□□□ -0.86
HDAC8-218ENST00000486704 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
HDAC8-218ENST00000486704 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
HDAC8-218ENST00000486704 ZNF861PO60384 105 aa9.63□□□□□ -0.87
HDAC8-218ENST00000486704 BCE1O60756 84 aa9.63□□□□□ -0.87
HDAC8-218ENST00000486704 KRTAP1-4P0C5Y4 121 aa9.62□□□□□ -0.87
HDAC8-218ENST00000486704 VPREB1P12018 145 aa9.62□□□□□ -0.87
HDAC8-218ENST00000486704 PLNP26678 52 aa9.62□□□□□ -0.87
HDAC8-218ENST00000486704 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
HDAC8-218ENST00000486704 H0Y8G0 127 aa9.61□□□□□ -0.87
HDAC8-218ENST00000486704 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
HDAC8-218ENST00000486704 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
HDAC8-218ENST00000486704 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
HDAC8-218ENST00000486704 HERV-K104P63124 156 aa9.6□□□□□ -0.87
HDAC8-218ENST00000486704 RPL24P83731 157 aaKnown RBP9.6□□□□□ -0.87
HDAC8-218ENST00000486704 SCO1O75880 301 aa9.59□□□□□ -0.87
HDAC8-218ENST00000486704 HIST1H2BKO60814 126 aa9.58□□□□□ -0.88
HDAC8-218ENST00000486704 DPM2O94777 84 aa9.58□□□□□ -0.88
HDAC8-218ENST00000486704 HIST1H2BJP06899 126 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms