RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
GSDMB-210ENST00000486560 Q8IZM0 81 aa7.56□□□□□ -1.2
GSDMB-210ENST00000486560 LINC01561Q8N1V8 128 aa7.56□□□□□ -1.2
GSDMB-210ENST00000486560 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
GSDMB-210ENST00000486560 TRBV30A0A0K0K1B3 111 aa7.55□□□□□ -1.2
GSDMB-210ENST00000486560 KIAA0087Q14695 138 aa7.55□□□□□ -1.2
GSDMB-210ENST00000486560 FAM19A3Q7Z5A8 133 aa7.55□□□□□ -1.2
GSDMB-210ENST00000486560 FAM19A2Q8N3H0 131 aa7.55□□□□□ -1.2
GSDMB-210ENST00000486560 CHCHD1Q96BP2 118 aaKnown RBP7.55□□□□□ -1.2
GSDMB-210ENST00000486560 FLG2Q5D862 2391 aaPredicted RBP7.54□□□□□ -1.2
GSDMB-210ENST00000486560 SMIM1B2RUZ4 78 aa7.54□□□□□ -1.2
GSDMB-210ENST00000486560 PDZD11Q5EBL8 140 aa7.54□□□□□ -1.2
GSDMB-210ENST00000486560 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
GSDMB-210ENST00000486560 Q6ZRP5 223 aa7.54□□□□□ -1.2
GSDMB-210ENST00000486560 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
GSDMB-210ENST00000486560 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
GSDMB-210ENST00000486560 FAM168BA1KXE4 195 aa7.53□□□□□ -1.2
GSDMB-210ENST00000486560 IFI27L1Q96BM0 104 aa7.53□□□□□ -1.2
GSDMB-210ENST00000486560 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
GSDMB-210ENST00000486560 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.21
GSDMB-210ENST00000486560 F8VRH5 84 aa7.52□□□□□ -1.21
GSDMB-210ENST00000486560 SERF1AO75920 110 aa7.52□□□□□ -1.21
GSDMB-210ENST00000486560 IGLC3P0DOY3 106 aa7.52□□□□□ -1.21
GSDMB-210ENST00000486560 CXCL5P42830 114 aa7.52□□□□□ -1.21
GSDMB-210ENST00000486560 PHF5AQ7RTV0 110 aaKnown RBP7.52□□□□□ -1.21
GSDMB-210ENST00000486560 COLCA2A8K830 154 aa7.51□□□□□ -1.21
GSDMB-210ENST00000486560 FABP4P15090 132 aa7.51□□□□□ -1.21
GSDMB-210ENST00000486560 ZNF22P17026 224 aaPredicted RBP7.51□□□□□ -1.21
GSDMB-210ENST00000486560 HNRNPA3P51991 378 aaKnown RBP7.51□□□□□ -1.21
GSDMB-210ENST00000486560 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
GSDMB-210ENST00000486560 UBE2BP63146 152 aa7.51□□□□□ -1.21
GSDMB-210ENST00000486560 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
GSDMB-210ENST00000486560 C11orf86A6NJI1 115 aa7.5□□□□□ -1.21
GSDMB-210ENST00000486560 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
GSDMB-210ENST00000486560 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
GSDMB-210ENST00000486560 FAT1Q14517 4588 aa7.49□□□□□ -1.21
GSDMB-210ENST00000486560 M0QXV9 152 aa7.49□□□□□ -1.21
GSDMB-210ENST00000486560 LEPROTL1O95214 131 aa7.49□□□□□ -1.21
GSDMB-210ENST00000486560 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
GSDMB-210ENST00000486560 PFN2P35080 140 aa7.49□□□□□ -1.21
GSDMB-210ENST00000486560 ZNF625Q96I27 306 aaPredicted RBP7.48□□□□□ -1.21
GSDMB-210ENST00000486560 C1orf137Q5JT78 98 aa7.47□□□□□ -1.21
GSDMB-210ENST00000486560 C9orf129Q5T035 196 aaKnown RBP7.47□□□□□ -1.21
GSDMB-210ENST00000486560 HSPB8Q9UJY1 196 aa7.46□□□□□ -1.22
GSDMB-210ENST00000486560 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
GSDMB-210ENST00000486560 TRAV12-1A0A0B4J245 112 aa7.45□□□□□ -1.22
GSDMB-210ENST00000486560 NUPR1O60356 82 aa7.45□□□□□ -1.22
GSDMB-210ENST00000486560 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
GSDMB-210ENST00000486560 A0A0U1RRA0 63 aa7.44□□□□□ -1.22
GSDMB-210ENST00000486560 LINC00310P59036 64 aa7.44□□□□□ -1.22
GSDMB-210ENST00000486560 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
GSDMB-210ENST00000486560 KRTAP29-1A8MX34 341 aaPredicted RBP7.43□□□□□ -1.22
GSDMB-210ENST00000486560 ATP6V1G1O75348 118 aa7.43□□□□□ -1.22
GSDMB-210ENST00000486560 SERTAD4-AS1Q5TG53 156 aa7.43□□□□□ -1.22
GSDMB-210ENST00000486560 ERG28Q9UKR5 140 aa7.43□□□□□ -1.22
GSDMB-210ENST00000486560 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 TMEM223A0PJW6 202 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 GAGE10A6NGK3 116 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BKO60814 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BJP06899 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BOP23527 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BBP33778 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 LINC00158P58513 81 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BDP58876 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BCP62807 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST2H2BEQ16778 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 MEIG1Q5JSS6 88 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.42□□□□□ -1.22
GSDMB-210ENST00000486560 NKAPP1Q8N9T2 125 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BHQ93079 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BNQ99877 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 HIST1H2BMQ99879 126 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 MAP1LC3CQ9BXW4 147 aa7.42□□□□□ -1.22
GSDMB-210ENST00000486560 OXTP01178 125 aa7.41□□□□□ -1.22
GSDMB-210ENST00000486560 ODF1Q14990 250 aa7.41□□□□□ -1.22
GSDMB-210ENST00000486560 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
GSDMB-210ENST00000486560 VPS13BQ7Z7G8 4022 aa7.4□□□□□ -1.22
GSDMB-210ENST00000486560 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.22
GSDMB-210ENST00000486560 LBHQ53QV2 105 aaPredicted RBP7.4□□□□□ -1.22
GSDMB-210ENST00000486560 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.22
GSDMB-210ENST00000486560 DPM2O94777 84 aa7.39□□□□□ -1.23
GSDMB-210ENST00000486560 PLNP26678 52 aa7.39□□□□□ -1.23
GSDMB-210ENST00000486560 HERVK_113P61574 105 aa7.39□□□□□ -1.23
GSDMB-210ENST00000486560 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
GSDMB-210ENST00000486560 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
GSDMB-210ENST00000486560 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
GSDMB-210ENST00000486560 IGKCP01834 107 aa7.38□□□□□ -1.23
GSDMB-210ENST00000486560 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
GSDMB-210ENST00000486560 SFTA2Q6UW10 78 aa7.38□□□□□ -1.23
GSDMB-210ENST00000486560 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
GSDMB-210ENST00000486560 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
GSDMB-210ENST00000486560 LGALS3P17931 250 aaKnown RBP7.37□□□□□ -1.23
GSDMB-210ENST00000486560 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
GSDMB-210ENST00000486560 NDUFA12Q9UI09 145 aa7.37□□□□□ -1.23
GSDMB-210ENST00000486560 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
GSDMB-210ENST00000486560 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
GSDMB-210ENST00000486560 S100A1P23297 94 aa7.36□□□□□ -1.23
GSDMB-210ENST00000486560 COX17Q14061 63 aa7.36□□□□□ -1.23
GSDMB-210ENST00000486560 PLEKHB2Q96CS7 222 aa7.36□□□□□ -1.23
GSDMB-210ENST00000486560 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms