RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
SNX21-211ENST00000486336 PACRGQ96M98 296 aaPredicted RBP6.89□□□□□ -1.31
SNX21-211ENST00000486336 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
SNX21-211ENST00000486336 LINC01546A6NGU7 62 aa6.88□□□□□ -1.31
SNX21-211ENST00000486336 CKS1BP61024 79 aa6.88□□□□□ -1.31
SNX21-211ENST00000486336 HERVK_113P63121 156 aa6.88□□□□□ -1.31
SNX21-211ENST00000486336 LINC01561Q8N1V8 128 aa6.88□□□□□ -1.31
SNX21-211ENST00000486336 Q6ZRP5 223 aa6.87□□□□□ -1.31
SNX21-211ENST00000486336 PHF5AQ7RTV0 110 aaKnown RBP6.87□□□□□ -1.31
SNX21-211ENST00000486336 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
SNX21-211ENST00000486336 CDKN2A-AS1Q9UH64 79 aa6.87□□□□□ -1.31
SNX21-211ENST00000486336 FAT3Q8TDW7 4589 aa6.87□□□□□ -1.31
SNX21-211ENST00000486336 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
SNX21-211ENST00000486336 HSBP1O75506 76 aa6.86□□□□□ -1.31
SNX21-211ENST00000486336 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
SNX21-211ENST00000486336 NDUFA6P56556 154 aa6.86□□□□□ -1.31
SNX21-211ENST00000486336 FAM19A5Q7Z5A7 132 aaPredicted RBP6.86□□□□□ -1.31
SNX21-211ENST00000486336 FAM19A3Q7Z5A8 133 aa6.86□□□□□ -1.31
SNX21-211ENST00000486336 FAM168BA1KXE4 195 aa6.85□□□□□ -1.31
SNX21-211ENST00000486336 CST9LQ9H4G1 147 aa6.85□□□□□ -1.31
SNX21-211ENST00000486336 TINCRA0A1B0GVN0 87 aa6.84□□□□□ -1.31
SNX21-211ENST00000486336 ATP5LO75964 103 aa6.84□□□□□ -1.31
SNX21-211ENST00000486336 HBDP02042 147 aa6.84□□□□□ -1.31
SNX21-211ENST00000486336 PMVKQ15126 192 aa6.84□□□□□ -1.31
SNX21-211ENST00000486336 Q8IZM0 81 aa6.84□□□□□ -1.31
SNX21-211ENST00000486336 NDUFC2-KCTD14E9PQ53 114 aa6.83□□□□□ -1.32
SNX21-211ENST00000486336 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
SNX21-211ENST00000486336 C1orf137Q5JT78 98 aa6.83□□□□□ -1.32
SNX21-211ENST00000486336 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
SNX21-211ENST00000486336 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
SNX21-211ENST00000486336 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
SNX21-211ENST00000486336 SERTAD4-AS1Q5TG53 156 aa6.82□□□□□ -1.32
SNX21-211ENST00000486336 COX7B2Q8TF08 81 aa6.82□□□□□ -1.32
SNX21-211ENST00000486336 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 UBE2BP63146 152 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 PDZD11Q5EBL8 140 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
SNX21-211ENST00000486336 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
SNX21-211ENST00000486336 REG3GQ6UW15 175 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 URB1-AS1Q96HZ7 61 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 HSPB8Q9UJY1 196 aa6.81□□□□□ -1.32
SNX21-211ENST00000486336 F8VRH5 84 aa6.8□□□□□ -1.32
SNX21-211ENST00000486336 H3BRM9 83 aa6.8□□□□□ -1.32
SNX21-211ENST00000486336 M0QXV9 152 aa6.8□□□□□ -1.32
SNX21-211ENST00000486336 S100A6P06703 90 aa6.8□□□□□ -1.32
SNX21-211ENST00000486336 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
SNX21-211ENST00000486336 CXCL5P42830 114 aa6.8□□□□□ -1.32
SNX21-211ENST00000486336 SRSF9Q13242 221 aaKnown RBP eCLIP6.8□□□□□ -1.32
SNX21-211ENST00000486336 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
SNX21-211ENST00000486336 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
SNX21-211ENST00000486336 A0A096LNJ9 63 aa6.79□□□□□ -1.32
SNX21-211ENST00000486336 LEPROTL1O95214 131 aa6.79□□□□□ -1.32
SNX21-211ENST00000486336 COA6Q5JTJ3 125 aaKnown RBP6.79□□□□□ -1.32
SNX21-211ENST00000486336 SERF1AO75920 110 aa6.78□□□□□ -1.32
SNX21-211ENST00000486336 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
SNX21-211ENST00000486336 KRTAP7-1Q8IUC3 87 aa6.78□□□□□ -1.32
SNX21-211ENST00000486336 LINC01600Q96MT4 127 aa6.78□□□□□ -1.32
SNX21-211ENST00000486336 IGLC3P0DOY3 106 aa6.77□□□□□ -1.33
SNX21-211ENST00000486336 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
SNX21-211ENST00000486336 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
SNX21-211ENST00000486336 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
SNX21-211ENST00000486336 S100A2P29034 98 aa6.76□□□□□ -1.33
SNX21-211ENST00000486336 AKR1D1P51857 326 aa6.76□□□□□ -1.33
SNX21-211ENST00000486336 MAP1LC3CQ9BXW4 147 aa6.76□□□□□ -1.33
SNX21-211ENST00000486336 C22orf24Q9Y442 160 aa6.76□□□□□ -1.33
SNX21-211ENST00000486336 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
SNX21-211ENST00000486336 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
SNX21-211ENST00000486336 TMEM170BQ5T4T1 132 aa6.75□□□□□ -1.33
SNX21-211ENST00000486336 FAM19A2Q8N3H0 131 aa6.75□□□□□ -1.33
SNX21-211ENST00000486336 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
SNX21-211ENST00000486336 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
SNX21-211ENST00000486336 PFN2P35080 140 aa6.74□□□□□ -1.33
SNX21-211ENST00000486336 DIRC1Q969H9 104 aa6.74□□□□□ -1.33
SNX21-211ENST00000486336 CHTOPQ9Y3Y2 248 aaKnown RBP6.74□□□□□ -1.33
SNX21-211ENST00000486336 ODF1Q14990 250 aa6.73□□□□□ -1.33
SNX21-211ENST00000486336 IGLV5-39A0A0G2JS06 123 aa6.72□□□□□ -1.33
SNX21-211ENST00000486336 FABP4P15090 132 aa6.72□□□□□ -1.33
SNX21-211ENST00000486336 KRTAP10-8P60410 259 aa6.72□□□□□ -1.33
SNX21-211ENST00000486336 MRPL55Q7Z7F7 128 aaKnown RBP6.72□□□□□ -1.33
SNX21-211ENST00000486336 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
SNX21-211ENST00000486336 GAGE10A6NGK3 116 aa6.71□□□□□ -1.34
SNX21-211ENST00000486336 H0Y8G0 127 aa6.71□□□□□ -1.34
SNX21-211ENST00000486336 NUPR1O60356 82 aa6.71□□□□□ -1.34
SNX21-211ENST00000486336 C20orf202A1L168 122 aa6.7□□□□□ -1.34
SNX21-211ENST00000486336 RPL37AP8A6NKH3 93 aa6.7□□□□□ -1.34
SNX21-211ENST00000486336 H0Y9J4 135 aa6.7□□□□□ -1.34
SNX21-211ENST00000486336 PLNP26678 52 aa6.7□□□□□ -1.34
SNX21-211ENST00000486336 LINC00310P59036 64 aa6.7□□□□□ -1.34
SNX21-211ENST00000486336 PET117Q6UWS5 81 aa6.7□□□□□ -1.34
SNX21-211ENST00000486336 NKAPP1Q8N9T2 125 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms