RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 TIMM17BO60830 172 aa8.75□□□□□ -1.01
VTI1BP1-201ENST00000486325 DDTP30046 118 aa8.75□□□□□ -1.01
VTI1BP1-201ENST00000486325 Q6ZRN7 208 aaPredicted RBP8.75□□□□□ -1.01
VTI1BP1-201ENST00000486325 LCE6AA0A183 80 aa8.74□□□□□ -1.01
VTI1BP1-201ENST00000486325 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
VTI1BP1-201ENST00000486325 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
VTI1BP1-201ENST00000486325 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
VTI1BP1-201ENST00000486325 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
VTI1BP1-201ENST00000486325 COX17Q14061 63 aa8.73□□□□□ -1.01
VTI1BP1-201ENST00000486325 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
VTI1BP1-201ENST00000486325 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
VTI1BP1-201ENST00000486325 Q6ZVH6 145 aa8.73□□□□□ -1.01
VTI1BP1-201ENST00000486325 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
VTI1BP1-201ENST00000486325 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
VTI1BP1-201ENST00000486325 TAL2Q16559 108 aa8.72□□□□□ -1.01
VTI1BP1-201ENST00000486325 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
VTI1BP1-201ENST00000486325 C2orf91Q6ZV80 131 aa8.72□□□□□ -1.01
VTI1BP1-201ENST00000486325 SPANXB1Q9NS25 103 aaPredicted RBP8.72□□□□□ -1.01
VTI1BP1-201ENST00000486325 PCP4L1A6NKN8 68 aa8.71□□□□□ -1.02
VTI1BP1-201ENST00000486325 GCSHP23434 173 aa8.71□□□□□ -1.02
VTI1BP1-201ENST00000486325 RNF151Q2KHN1 245 aa8.71□□□□□ -1.02
VTI1BP1-201ENST00000486325 COPS9Q8WXC6 57 aa8.71□□□□□ -1.02
VTI1BP1-201ENST00000486325 LINC00526Q96FQ7 95 aa8.71□□□□□ -1.02
VTI1BP1-201ENST00000486325 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
VTI1BP1-201ENST00000486325 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
VTI1BP1-201ENST00000486325 LECT2O14960 151 aa8.7□□□□□ -1.02
VTI1BP1-201ENST00000486325 LINC00158P58513 81 aa8.7□□□□□ -1.02
VTI1BP1-201ENST00000486325 HIST1H4GQ99525 98 aa8.7□□□□□ -1.02
VTI1BP1-201ENST00000486325 ERG28Q9UKR5 140 aa8.7□□□□□ -1.02
VTI1BP1-201ENST00000486325 EREGO14944 169 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 IFITM1P13164 125 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 CTAG1AP78358 180 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 HSD52Q0P140 79 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 C10orf25Q5T742 122 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
VTI1BP1-201ENST00000486325 DNAH1Q9P2D7 4330 aa8.68□□□□□ -1.02
VTI1BP1-201ENST00000486325 Q6ZRU5 148 aa8.68□□□□□ -1.02
VTI1BP1-201ENST00000486325 CARD19Q96LW7 228 aa8.68□□□□□ -1.02
VTI1BP1-201ENST00000486325 LITAFQ99732 161 aa8.68□□□□□ -1.02
VTI1BP1-201ENST00000486325 A0A087WTM6 91 aa8.67□□□□□ -1.02
VTI1BP1-201ENST00000486325 PFN2P35080 140 aa8.67□□□□□ -1.02
VTI1BP1-201ENST00000486325 PTTG1IPP53801 180 aa8.67□□□□□ -1.02
VTI1BP1-201ENST00000486325 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
VTI1BP1-201ENST00000486325 WFDC2Q14508 124 aa8.67□□□□□ -1.02
VTI1BP1-201ENST00000486325 ALMS1Q8TCU4 4167 aa8.67□□□□□ -1.02
VTI1BP1-201ENST00000486325 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
VTI1BP1-201ENST00000486325 LYSTQ99698 3801 aa8.66□□□□□ -1.02
VTI1BP1-201ENST00000486325 M0R143 59 aa8.66□□□□□ -1.02
VTI1BP1-201ENST00000486325 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
VTI1BP1-201ENST00000486325 PPDPFQ9H3Y8 114 aa8.66□□□□□ -1.02
VTI1BP1-201ENST00000486325 PKIGQ9Y2B9 76 aa8.66□□□□□ -1.02
VTI1BP1-201ENST00000486325 A0A0U1RRA0 63 aa8.65□□□□□ -1.02
VTI1BP1-201ENST00000486325 SLPIP03973 132 aa8.65□□□□□ -1.02
VTI1BP1-201ENST00000486325 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
VTI1BP1-201ENST00000486325 CEND1Q8N111 149 aa8.65□□□□□ -1.02
VTI1BP1-201ENST00000486325 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
VTI1BP1-201ENST00000486325 Q8N814 137 aa8.65□□□□□ -1.02
VTI1BP1-201ENST00000486325 NDUFC2-KCTD14E9PQ53 114 aa8.64□□□□□ -1.03
VTI1BP1-201ENST00000486325 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
VTI1BP1-201ENST00000486325 RPL24P83731 157 aaKnown RBP8.64□□□□□ -1.03
VTI1BP1-201ENST00000486325 MUSTN1Q8IVN3 82 aa8.64□□□□□ -1.03
VTI1BP1-201ENST00000486325 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
VTI1BP1-201ENST00000486325 DNAH6Q9C0G6 4158 aa8.62□□□□□ -1.03
VTI1BP1-201ENST00000486325 LOC107984156A0A0G2JMH3 177 aa8.62□□□□□ -1.03
VTI1BP1-201ENST00000486325 TMEM238LA0A1B0GVL6 79 aa8.62□□□□□ -1.03
VTI1BP1-201ENST00000486325 A6NJY4 79 aa8.62□□□□□ -1.03
VTI1BP1-201ENST00000486325 RTL8CO15255 209 aa8.62□□□□□ -1.03
VTI1BP1-201ENST00000486325 ARL17AQ8IVW1 177 aa8.62□□□□□ -1.03
VTI1BP1-201ENST00000486325 DAND5Q8N907 189 aa8.62□□□□□ -1.03
VTI1BP1-201ENST00000486325 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP1-201ENST00000486325 LOC107984640A0A0U1RRK4 108 aa8.61□□□□□ -1.03
VTI1BP1-201ENST00000486325 HINT1P49773 126 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP1-201ENST00000486325 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
VTI1BP1-201ENST00000486325 TNP2Q05952 138 aa8.6□□□□□ -1.03
VTI1BP1-201ENST00000486325 BVES-AS1Q5T3Y7 98 aa8.6□□□□□ -1.03
VTI1BP1-201ENST00000486325 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
VTI1BP1-201ENST00000486325 SND1-IT1Q9HBX3 110 aa8.6□□□□□ -1.03
VTI1BP1-201ENST00000486325 KMT2AQ03164 3969 aa8.58□□□□□ -1.04
VTI1BP1-201ENST00000486325 A6NDN8 102 aa8.58□□□□□ -1.04
VTI1BP1-201ENST00000486325 NPC2P61916 151 aa8.58□□□□□ -1.04
VTI1BP1-201ENST00000486325 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
VTI1BP1-201ENST00000486325 A4D1N5 150 aa8.57□□□□□ -1.04
VTI1BP1-201ENST00000486325 FXYD2P54710 66 aa8.57□□□□□ -1.04
VTI1BP1-201ENST00000486325 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
VTI1BP1-201ENST00000486325 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
VTI1BP1-201ENST00000486325 Q6ZRP5 223 aa8.57□□□□□ -1.04
VTI1BP1-201ENST00000486325 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
VTI1BP1-201ENST00000486325 NDUFC2O95298 119 aa8.56□□□□□ -1.04
VTI1BP1-201ENST00000486325 BATFQ16520 125 aa8.56□□□□□ -1.04
VTI1BP1-201ENST00000486325 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
VTI1BP1-201ENST00000486325 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
VTI1BP1-201ENST00000486325 C16orf90A8MZG2 172 aa8.55□□□□□ -1.04
VTI1BP1-201ENST00000486325 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
VTI1BP1-201ENST00000486325 SNHG12Q9BXW3 62 aa8.55□□□□□ -1.04
VTI1BP1-201ENST00000486325 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
VTI1BP1-201ENST00000486325 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
VTI1BP1-201ENST00000486325 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms