RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 GAGE2BQ13066 116 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 LINC01561Q8N1V8 128 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 TMEM141Q96I45 108 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 NXT2Q9NPJ8 142 aaKnown RBP4.73□□□□□ -1.65
CPNE1-226ENST00000486021 MRPL35Q9NZE8 188 aaKnown RBP4.73□□□□□ -1.65
CPNE1-226ENST00000486021 CYSLTR1Q9Y271 337 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 TRAV9-1A0A075B6T8 112 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 A0A1B0GXF2 115 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 GAS8-AS1O95177 125 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 NPYP01303 97 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 HNRNPA3P51991 378 aaKnown RBP4.72□□□□□ -1.65
CPNE1-226ENST00000486021 UBE2V1Q13404 147 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 BATFQ16520 125 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 Q6ZUT4 128 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 C5orf38Q86SI9 138 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 VCX2Q9H322 139 aa4.72□□□□□ -1.65
CPNE1-226ENST00000486021 SRRM2Q9UQ35 2752 aaKnown RBP4.72□□□□□ -1.65
CPNE1-226ENST00000486021 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
CPNE1-226ENST00000486021 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.66
CPNE1-226ENST00000486021 TRBV30A0A0K0K1B3 111 aa4.71□□□□□ -1.66
CPNE1-226ENST00000486021 PANO1I0J062 215 aa4.71□□□□□ -1.66
CPNE1-226ENST00000486021 MT-ND6P03923 174 aa4.71□□□□□ -1.66
CPNE1-226ENST00000486021 RPL39P62891 51 aaKnown RBP4.71□□□□□ -1.66
CPNE1-226ENST00000486021 PRR3P79522 188 aaKnown RBP4.71□□□□□ -1.66
CPNE1-226ENST00000486021 MTURNQ8N3F0 131 aa4.71□□□□□ -1.66
CPNE1-226ENST00000486021 Q8N8P6 123 aa4.71□□□□□ -1.66
CPNE1-226ENST00000486021 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
CPNE1-226ENST00000486021 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
CPNE1-226ENST00000486021 A0A087WZ39 114 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 IGHV3OR16-9A0A0B4J2B5 98 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 LOC389332A0A1B0GUA5 103 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 TLX1NBP0CAT3 122 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 CKS1BP61024 79 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 HERVK_113P63121 156 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 PMCHL1Q16048 86 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 RNASE13Q5GAN3 156 aaKnown RBP4.7□□□□□ -1.66
CPNE1-226ENST00000486021 LINC00526Q96FQ7 95 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 TRAPPC1Q9Y5R8 145 aa4.7□□□□□ -1.66
CPNE1-226ENST00000486021 CXCL5P42830 114 aa4.69□□□□□ -1.66
CPNE1-226ENST00000486021 VAMP3Q15836 100 aa4.69□□□□□ -1.66
CPNE1-226ENST00000486021 C6orf226Q5I0X4 101 aa4.69□□□□□ -1.66
CPNE1-226ENST00000486021 C2orf66Q6UXQ4 117 aa4.69□□□□□ -1.66
CPNE1-226ENST00000486021 LINC01600Q96MT4 127 aa4.69□□□□□ -1.66
CPNE1-226ENST00000486021 GEMIN7Q9H840 131 aaKnown RBP4.69□□□□□ -1.66
CPNE1-226ENST00000486021 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
CPNE1-226ENST00000486021 A0A1B0GV72 72 aa4.68□□□□□ -1.66
CPNE1-226ENST00000486021 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.68□□□□□ -1.66
CPNE1-226ENST00000486021 SCGB1A1P11684 91 aa4.68□□□□□ -1.66
CPNE1-226ENST00000486021 C9orf116Q5BN46 136 aaPredicted RBP4.68□□□□□ -1.66
CPNE1-226ENST00000486021 IGLV4-3A0A075B6K6 122 aa4.67□□□□□ -1.66
CPNE1-226ENST00000486021 UBE2BP63146 152 aa4.67□□□□□ -1.66
CPNE1-226ENST00000486021 GTF2H5Q6ZYL4 71 aa4.67□□□□□ -1.66
CPNE1-226ENST00000486021 BAGE3Q86Y29 109 aa4.67□□□□□ -1.66
CPNE1-226ENST00000486021 Q8IZM0 81 aa4.67□□□□□ -1.66
CPNE1-226ENST00000486021 DIRC1Q969H9 104 aa4.67□□□□□ -1.66
CPNE1-226ENST00000486021 TIMM17AQ99595 171 aa4.67□□□□□ -1.66
CPNE1-226ENST00000486021 A0A0J9YXV3 536 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 NDUFC2-KCTD14E9PQ53 114 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 J3QR89 54 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 UBE2D1P51668 147 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 SPATA45Q537H7 98 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 C1orf137Q5JT78 98 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 LINC00242Q5T6M2 205 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 ERASQ7Z444 233 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 FAM19A3Q7Z5A8 133 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 AMELXQ99217 191 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
CPNE1-226ENST00000486021 GNB1LQ9BYB4 327 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 TOMM7Q9P0U1 55 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 PAM16Q9Y3D7 125 aa4.66□□□□□ -1.66
CPNE1-226ENST00000486021 TMEM238C9JI98 176 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 H3BRM9 83 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 NUPR1O60356 82 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 ODF1Q14990 250 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 GAGE2EQ4V326 116 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 FA2HQ7L5A8 372 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 TOMM6Q96B49 74 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 SCGB3A1Q96QR1 104 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 PMCHL2Q9BQD1 86 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 GAGE2DQ9UEU5 116 aa4.65□□□□□ -1.67
CPNE1-226ENST00000486021 M0QXV9 152 aa4.64□□□□□ -1.67
CPNE1-226ENST00000486021 SRSF9Q13242 221 aaKnown RBP eCLIP4.64□□□□□ -1.67
CPNE1-226ENST00000486021 OCIAD2Q56VL3 154 aa4.64□□□□□ -1.67
CPNE1-226ENST00000486021 SFTA2Q6UW10 78 aa4.64□□□□□ -1.67
CPNE1-226ENST00000486021 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
CPNE1-226ENST00000486021 MRPL18Q9H0U6 180 aaKnown RBP4.64□□□□□ -1.67
CPNE1-226ENST00000486021 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
CPNE1-226ENST00000486021 DNAH8Q96JB1 4490 aa4.64□□□□□ -1.67
CPNE1-226ENST00000486021 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 A0A1W2PNN7 141 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 IGIPA6NJ69 53 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 F8VRH5 84 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 IGLV7-43P04211 117 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 RPL13AP40429 203 aaKnown RBP4.63□□□□□ -1.67
CPNE1-226ENST00000486021 KRTDAPP60985 99 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 PHF5AQ7RTV0 110 aaKnown RBP4.63□□□□□ -1.67
CPNE1-226ENST00000486021 FAM19A5Q7Z5A7 132 aaPredicted RBP4.63□□□□□ -1.67
CPNE1-226ENST00000486021 CST9LQ9H4G1 147 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 C6orf48Q9UBA6 75 aa4.63□□□□□ -1.67
CPNE1-226ENST00000486021 IGLC3P0DOY3 106 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms