RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CXCL5P42830 114 aa11.42□□□□□ -0.58
CHMP3-207ENST00000485465 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
CHMP3-207ENST00000485465 MAJINQ3KP22 176 aa11.42□□□□□ -0.58
CHMP3-207ENST00000485465 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
CHMP3-207ENST00000485465 Q6ZRU5 148 aa11.42□□□□□ -0.58
CHMP3-207ENST00000485465 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-207ENST00000485465 J3QQQ9 107 aa11.41□□□□□ -0.58
CHMP3-207ENST00000485465 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
CHMP3-207ENST00000485465 ANKRD39Q53RE8 183 aa11.41□□□□□ -0.58
CHMP3-207ENST00000485465 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
CHMP3-207ENST00000485465 CARD19Q96LW7 228 aa11.41□□□□□ -0.58
CHMP3-207ENST00000485465 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
CHMP3-207ENST00000485465 HECTD4Q9Y4D8 3996 aa11.4□□□□□ -0.58
CHMP3-207ENST00000485465 IGLV5-52A0A0A0MRZ9 124 aa11.4□□□□□ -0.58
CHMP3-207ENST00000485465 HSBP1L1C9JCN9 74 aa11.4□□□□□ -0.58
CHMP3-207ENST00000485465 IGKV2D-26A0A0A0MRZ7 120 aa11.39□□□□□ -0.59
CHMP3-207ENST00000485465 LGALS3P17931 250 aaKnown RBP11.39□□□□□ -0.59
CHMP3-207ENST00000485465 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
CHMP3-207ENST00000485465 CDPF1Q6NVV7 123 aa11.38□□□□□ -0.59
CHMP3-207ENST00000485465 C9orf163Q8N9P6 203 aa11.38□□□□□ -0.59
CHMP3-207ENST00000485465 ZNF625Q96I27 306 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-207ENST00000485465 C6orf48Q9UBA6 75 aa11.38□□□□□ -0.59
CHMP3-207ENST00000485465 TRBV30A0A0K0K1B3 111 aa11.37□□□□□ -0.59
CHMP3-207ENST00000485465 SFTA2Q6UW10 78 aa11.37□□□□□ -0.59
CHMP3-207ENST00000485465 NDUFA12Q9UI09 145 aa11.37□□□□□ -0.59
CHMP3-207ENST00000485465 NMUP48645 174 aa11.36□□□□□ -0.59
CHMP3-207ENST00000485465 MYMXA0A1B0GTQ4 84 aa11.35□□□□□ -0.59
CHMP3-207ENST00000485465 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
CHMP3-207ENST00000485465 LINC01620Q4KN68 170 aa11.34□□□□□ -0.59
CHMP3-207ENST00000485465 C9orf116Q5BN46 136 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-207ENST00000485465 HERV-K104P63124 156 aa11.33□□□□□ -0.6
CHMP3-207ENST00000485465 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
CHMP3-207ENST00000485465 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
CHMP3-207ENST00000485465 GCSHP23434 173 aa11.32□□□□□ -0.6
CHMP3-207ENST00000485465 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
CHMP3-207ENST00000485465 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
CHMP3-207ENST00000485465 ZNF815PA8K554 130 aa11.31□□□□□ -0.6
CHMP3-207ENST00000485465 SDIM1Q6ZPB5 146 aa11.31□□□□□ -0.6
CHMP3-207ENST00000485465 PCP2Q8IVA1 136 aa11.31□□□□□ -0.6
CHMP3-207ENST00000485465 LOC107984640A0A0U1RRK4 108 aa11.3□□□□□ -0.6
CHMP3-207ENST00000485465 TLX1NBP0CAT3 122 aa11.3□□□□□ -0.6
CHMP3-207ENST00000485465 ERG28Q9UKR5 140 aa11.3□□□□□ -0.6
CHMP3-207ENST00000485465 SMIM6P0DI80 62 aa11.29□□□□□ -0.6
CHMP3-207ENST00000485465 PKIGQ9Y2B9 76 aa11.29□□□□□ -0.6
CHMP3-207ENST00000485465 A0A0J9YXY3 114 aa11.28□□□□□ -0.6
CHMP3-207ENST00000485465 C16orf90A8MZG2 172 aa11.28□□□□□ -0.6
CHMP3-207ENST00000485465 NDUFC2-KCTD14E9PQ53 114 aa11.28□□□□□ -0.6
CHMP3-207ENST00000485465 PFN2P35080 140 aa11.28□□□□□ -0.6
CHMP3-207ENST00000485465 COX17Q14061 63 aa11.28□□□□□ -0.6
CHMP3-207ENST00000485465 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
CHMP3-207ENST00000485465 LINC00587B1AMM8 73 aa11.27□□□□□ -0.61
CHMP3-207ENST00000485465 KRTAP10-1P60331 282 aa11.27□□□□□ -0.61
CHMP3-207ENST00000485465 S100A12P80511 92 aa11.27□□□□□ -0.61
CHMP3-207ENST00000485465 RPL18AQ02543 176 aaKnown RBP11.27□□□□□ -0.61
CHMP3-207ENST00000485465 Q6ZRP5 223 aa11.27□□□□□ -0.61
CHMP3-207ENST00000485465 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
CHMP3-207ENST00000485465 COX8AP10176 69 aa11.26□□□□□ -0.61
CHMP3-207ENST00000485465 LINC00158P58513 81 aa11.25□□□□□ -0.61
CHMP3-207ENST00000485465 GAGE2BQ13066 116 aa11.25□□□□□ -0.61
CHMP3-207ENST00000485465 A0A096LNI7 61 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 PTTG1IPP53801 180 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 C14orf144Q96I85 54 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 PKHD1P08F94 4074 aa11.24□□□□□ -0.61
CHMP3-207ENST00000485465 CIRBPQ14011 172 aaKnown RBP11.23□□□□□ -0.61
CHMP3-207ENST00000485465 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
CHMP3-207ENST00000485465 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
CHMP3-207ENST00000485465 KRTAP3-2Q9BYR7 98 aa11.23□□□□□ -0.61
CHMP3-207ENST00000485465 DYNC1H1Q14204 4646 aaKnown RBP11.22□□□□□ -0.61
CHMP3-207ENST00000485465 IGKV2-24A0A0C4DH68 120 aa11.22□□□□□ -0.61
CHMP3-207ENST00000485465 DLEU1O43261 78 aa11.22□□□□□ -0.61
CHMP3-207ENST00000485465 TIMM17BO60830 172 aa11.22□□□□□ -0.61
CHMP3-207ENST00000485465 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
CHMP3-207ENST00000485465 LITAFQ99732 161 aa11.21□□□□□ -0.61
CHMP3-207ENST00000485465 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
CHMP3-207ENST00000485465 TP73-AS1Q9UF72 201 aa11.21□□□□□ -0.61
CHMP3-207ENST00000485465 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-207ENST00000485465 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.62
CHMP3-207ENST00000485465 PANO1I0J062 215 aa11.2□□□□□ -0.62
CHMP3-207ENST00000485465 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
CHMP3-207ENST00000485465 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
CHMP3-207ENST00000485465 MIR7-3HGQ8N6C7 128 aa11.2□□□□□ -0.62
CHMP3-207ENST00000485465 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
CHMP3-207ENST00000485465 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
CHMP3-207ENST00000485465 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
CHMP3-207ENST00000485465 Q6ZSA8 131 aa11.19□□□□□ -0.62
CHMP3-207ENST00000485465 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
CHMP3-207ENST00000485465 C12orf57Q99622 126 aa11.19□□□□□ -0.62
CHMP3-207ENST00000485465 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
CHMP3-207ENST00000485465 DAND5Q8N907 189 aa11.18□□□□□ -0.62
CHMP3-207ENST00000485465 LRP1BQ9NZR2 4599 aa11.18□□□□□ -0.62
CHMP3-207ENST00000485465 TMEM238C9JI98 176 aa11.17□□□□□ -0.62
CHMP3-207ENST00000485465 DPH3Q96FX2 82 aa11.17□□□□□ -0.62
CHMP3-207ENST00000485465 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
CHMP3-207ENST00000485465 LINC00518Q8N0U6 118 aa11.15□□□□□ -0.62
CHMP3-207ENST00000485465 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
CHMP3-207ENST00000485465 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms