RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ZNF727A8MUV8 499 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 NOL3O60936 208 aaKnown RBP2.85□□□□□ -1.95
PTPN4-210ENST00000485247 UPK1BO75841 260 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 MPC2O95563 127 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 PET100P0DJ07 73 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 IL7P13232 177 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 H2BFSP57053 126 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 PRLHP81277 87 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 KIAA0087Q14695 138 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 Q6ZUT4 128 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 TCEAL7Q9BRU2 100 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 TP73-AS1Q9UF72 201 aa2.85□□□□□ -1.95
PTPN4-210ENST00000485247 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
PTPN4-210ENST00000485247 SPINK1P00995 79 aa2.84□□□□□ -1.95
PTPN4-210ENST00000485247 IFNA1P01562 189 aa2.84□□□□□ -1.95
PTPN4-210ENST00000485247 S100A9P06702 114 aaKnown RBP2.84□□□□□ -1.95
PTPN4-210ENST00000485247 DSCR10P59022 87 aa2.84□□□□□ -1.95
PTPN4-210ENST00000485247 RPS20P60866 119 aaKnown RBP2.84□□□□□ -1.95
PTPN4-210ENST00000485247 RPL32P62910 135 aaKnown RBP2.84□□□□□ -1.95
PTPN4-210ENST00000485247 PLEKHB2Q96CS7 222 aa2.84□□□□□ -1.95
PTPN4-210ENST00000485247 CSDC2Q9Y534 153 aaKnown RBP2.84□□□□□ -1.95
PTPN4-210ENST00000485247 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
PTPN4-210ENST00000485247 TRBV6-5A0A0K0K1A5 114 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 FHITP49789 147 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 TEX261Q6UWH6 196 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 Q8N377 158 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 FAM19A2Q8N3H0 131 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 C9orf62Q8N4C0 152 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 CCDC32Q9BV29 185 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 ST20Q9HBF5 79 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 LINC00846Q9NV44 126 aa2.83□□□□□ -1.96
PTPN4-210ENST00000485247 IGKV2-28A0A075B6P5 120 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 FAM240BA0A1B0GVZ2 78 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 XKRY2A2RUG3 117 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 MAP1LC3B2A6NCE7 125 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 C9orf92A6NGG3 77 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 IGKV2D-28P01615 120 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 FCER1GP30273 86 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 SMAGPQ0VAQ4 97 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 Q6Q795 121 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 TMUB2Q71RG4 321 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 MAP1LC3BQ9GZQ8 125 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 NEBP20929 6669 aa2.82□□□□□ -1.96
PTPN4-210ENST00000485247 TGIF2-C20orf24A0A0A6YYL0 155 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 RAB19A4D1S5 217 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 SLC25A20O43772 301 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 SCO1O75880 301 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 RPL35P42766 123 aaKnown RBP2.81□□□□□ -1.96
PTPN4-210ENST00000485247 POLR2KP53803 58 aaKnown RBP2.81□□□□□ -1.96
PTPN4-210ENST00000485247 Q6ZVQ6 151 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 CBLN2Q8IUK8 224 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 FAM210AQ96ND0 272 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 HIGD2AQ9BW72 106 aa2.81□□□□□ -1.96
PTPN4-210ENST00000485247 TRBV27A0A0K0K1C4 114 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 TMEM238C9JI98 176 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 CKS1BP61024 79 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 CENPWQ5EE01 88 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 AKR1C8PQ5T2L2 129 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 RPL7L1Q6DKI1 246 aaKnown RBP2.8□□□□□ -1.96
PTPN4-210ENST00000485247 SPRR4Q96PI1 79 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 CNFNQ9BYD5 112 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 TOMM7Q9P0U1 55 aa2.8□□□□□ -1.96
PTPN4-210ENST00000485247 A0A1B0GV50 99 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 PFDN1O60925 122 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 HBBP68871 147 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 NKAPP1Q8N9T2 125 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 FAM104AQ969W3 186 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 TIMM21Q9BVV7 248 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 TMEM126AQ9H061 195 aa2.79□□□□□ -1.96
PTPN4-210ENST00000485247 SSNA1O43805 119 aa2.78□□□□□ -1.96
PTPN4-210ENST00000485247 MT2AP02795 61 aa2.78□□□□□ -1.96
PTPN4-210ENST00000485247 RPS29P62273 56 aaKnown RBP2.78□□□□□ -1.96
PTPN4-210ENST00000485247 RPL39P62891 51 aaKnown RBP2.78□□□□□ -1.96
PTPN4-210ENST00000485247 C6orf226Q5I0X4 101 aa2.78□□□□□ -1.96
PTPN4-210ENST00000485247 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
PTPN4-210ENST00000485247 GNB1LQ9BYB4 327 aa2.78□□□□□ -1.96
PTPN4-210ENST00000485247 RPS10P5Q9NQ39 176 aa2.78□□□□□ -1.96
PTPN4-210ENST00000485247 BORCS7-ASMTA0A0B4J1R7 106 aa2.77□□□□□ -1.97
PTPN4-210ENST00000485247 SMKR1H3BMG3 65 aa2.77□□□□□ -1.97
PTPN4-210ENST00000485247 M0R378 163 aa2.77□□□□□ -1.97
PTPN4-210ENST00000485247 MT1FP04733 61 aa2.77□□□□□ -1.97
PTPN4-210ENST00000485247 GNG4P50150 75 aa2.77□□□□□ -1.97
PTPN4-210ENST00000485247 MOBPQ13875 183 aa2.77□□□□□ -1.97
PTPN4-210ENST00000485247 TRBV20OR9-2A0A075B6H5 130 aa2.76□□□□□ -1.97
PTPN4-210ENST00000485247 MRPS36P82909 103 aaKnown RBP2.76□□□□□ -1.97
PTPN4-210ENST00000485247 KCNRGQ8N5I3 272 aa2.76□□□□□ -1.97
PTPN4-210ENST00000485247 ENKURQ8TC29 256 aa2.76□□□□□ -1.97
PTPN4-210ENST00000485247 SFT2D1Q8WV19 159 aa2.76□□□□□ -1.97
PTPN4-210ENST00000485247 ZNF706Q9Y5V0 76 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-210ENST00000485247 F8VRH5 84 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 IGLV6-57P01721 117 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 RAB4AP20338 218 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 CCL20P78556 96 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 Q6ZN92 141 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 AMN1Q8IY45 258 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms