RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 HERV-K104P63124 156 aa13.5□□□□□ -0.25
VCPKMT-203ENST00000484763 HNRNPA3P51991 378 aaKnown RBP13.49□□□□□ -0.25
VCPKMT-203ENST00000484763 LINC00526Q96FQ7 95 aa13.49□□□□□ -0.25
VCPKMT-203ENST00000484763 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
VCPKMT-203ENST00000484763 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
VCPKMT-203ENST00000484763 C2orf91Q6ZV80 131 aa13.48□□□□□ -0.25
VCPKMT-203ENST00000484763 DDTP30046 118 aa13.48□□□□□ -0.25
VCPKMT-203ENST00000484763 NTN5Q8WTR8 489 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-203ENST00000484763 C1orf134Q5TEV5 83 aa13.47□□□□□ -0.25
VCPKMT-203ENST00000484763 HIGD1BQ9P298 99 aa13.47□□□□□ -0.25
VCPKMT-203ENST00000484763 PCP4L1A6NKN8 68 aa13.46□□□□□ -0.25
VCPKMT-203ENST00000484763 LECT2O14960 151 aa13.46□□□□□ -0.25
VCPKMT-203ENST00000484763 C2orf48Q96LS8 159 aa13.46□□□□□ -0.25
VCPKMT-203ENST00000484763 DNAH2Q9P225 4427 aa13.45□□□□□ -0.26
VCPKMT-203ENST00000484763 LCE6AA0A183 80 aa13.45□□□□□ -0.26
VCPKMT-203ENST00000484763 CAMK2N2Q96S95 79 aa13.45□□□□□ -0.26
VCPKMT-203ENST00000484763 F8WDY8 70 aa13.44□□□□□ -0.26
VCPKMT-203ENST00000484763 WFDC2Q14508 124 aa13.44□□□□□ -0.26
VCPKMT-203ENST00000484763 MEIG1Q5JSS6 88 aa13.43□□□□□ -0.26
VCPKMT-203ENST00000484763 C14orf177Q52M58 125 aa13.43□□□□□ -0.26
VCPKMT-203ENST00000484763 UNQ6190/PRO20217Q6UXQ8 127 aa13.43□□□□□ -0.26
VCPKMT-203ENST00000484763 SACSQ9NZJ4 4579 aa13.42□□□□□ -0.26
VCPKMT-203ENST00000484763 TMEM238C9JI98 176 aa13.42□□□□□ -0.26
VCPKMT-203ENST00000484763 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
VCPKMT-203ENST00000484763 TIMM17BO60830 172 aa13.41□□□□□ -0.26
VCPKMT-203ENST00000484763 CIRBPQ14011 172 aaKnown RBP13.41□□□□□ -0.26
VCPKMT-203ENST00000484763 C10orf25Q5T742 122 aa13.41□□□□□ -0.26
VCPKMT-203ENST00000484763 SVIPQ8NHG7 77 aa13.41□□□□□ -0.26
VCPKMT-203ENST00000484763 LINC00587B1AMM8 73 aa13.41□□□□□ -0.26
VCPKMT-203ENST00000484763 HYDINQ4G0P3 5121 aa13.41□□□□□ -0.26
VCPKMT-203ENST00000484763 LITAFQ99732 161 aa13.4□□□□□ -0.26
VCPKMT-203ENST00000484763 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
VCPKMT-203ENST00000484763 TRBV30A0A0K0K1B3 111 aa13.39□□□□□ -0.27
VCPKMT-203ENST00000484763 SYCNQ0VAF6 134 aa13.39□□□□□ -0.27
VCPKMT-203ENST00000484763 Q6ZRU5 148 aa13.39□□□□□ -0.27
VCPKMT-203ENST00000484763 SPANXB1Q9NS25 103 aaPredicted RBP13.39□□□□□ -0.27
VCPKMT-203ENST00000484763 SMIM13P0DJ93 91 aa13.39□□□□□ -0.27
VCPKMT-203ENST00000484763 C6orf48Q9UBA6 75 aa13.38□□□□□ -0.27
VCPKMT-203ENST00000484763 CARD19Q96LW7 228 aa13.37□□□□□ -0.27
VCPKMT-203ENST00000484763 A0A0U1RRA0 63 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 PFN2P35080 140 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 SRSF9Q13242 221 aaKnown RBP eCLIP13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 COX17Q14061 63 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 HIST1H4GQ99525 98 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 SLPIP03973 132 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 LINC00158P58513 81 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 HSD52Q0P140 79 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 C9orf116Q5BN46 136 aaPredicted RBP13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 ADAMTSL4-AS1Q5T5F5 129 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 SPANXDQ9BXN6 97 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 SPANXCQ9NY87 97 aa13.36□□□□□ -0.27
VCPKMT-203ENST00000484763 A0A087WTM6 91 aa13.35□□□□□ -0.27
VCPKMT-203ENST00000484763 TAL2Q16559 108 aa13.35□□□□□ -0.27
VCPKMT-203ENST00000484763 Q6ZVH6 145 aa13.34□□□□□ -0.27
VCPKMT-203ENST00000484763 DAND5Q8N907 189 aa13.34□□□□□ -0.27
VCPKMT-203ENST00000484763 DNAH17Q9UFH2 4485 aa13.33□□□□□ -0.28
VCPKMT-203ENST00000484763 CNBPP62633 177 aaKnown RBP13.33□□□□□ -0.28
VCPKMT-203ENST00000484763 RNF151Q2KHN1 245 aa13.33□□□□□ -0.28
VCPKMT-203ENST00000484763 Q8N814 137 aa13.33□□□□□ -0.28
VCPKMT-203ENST00000484763 MIR7-3HGQ8N6C7 128 aa13.32□□□□□ -0.28
VCPKMT-203ENST00000484763 FRAS1Q86XX4 4008 aa13.32□□□□□ -0.28
VCPKMT-203ENST00000484763 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.32□□□□□ -0.28
VCPKMT-203ENST00000484763 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.32□□□□□ -0.28
VCPKMT-203ENST00000484763 RTL8CO15255 209 aa13.32□□□□□ -0.28
VCPKMT-203ENST00000484763 CEND1Q8N111 149 aa13.3□□□□□ -0.28
VCPKMT-203ENST00000484763 GCSHP23434 173 aa13.29□□□□□ -0.28
VCPKMT-203ENST00000484763 M0R143 59 aa13.29□□□□□ -0.28
VCPKMT-203ENST00000484763 IFITM1P13164 125 aa13.29□□□□□ -0.28
VCPKMT-203ENST00000484763 HINT1P49773 126 aaPredicted RBP13.28□□□□□ -0.28
VCPKMT-203ENST00000484763 NPC2P61916 151 aa13.28□□□□□ -0.28
VCPKMT-203ENST00000484763 COPS9Q8WXC6 57 aa13.28□□□□□ -0.28
VCPKMT-203ENST00000484763 NDUFC2-KCTD14E9PQ53 114 aa13.27□□□□□ -0.28
VCPKMT-203ENST00000484763 TNP2Q05952 138 aa13.27□□□□□ -0.28
VCPKMT-203ENST00000484763 MUSTN1Q8IVN3 82 aa13.27□□□□□ -0.28
VCPKMT-203ENST00000484763 LINC00308Q8TCZ7 52 aa13.27□□□□□ -0.28
VCPKMT-203ENST00000484763 EREGO14944 169 aa13.27□□□□□ -0.29
VCPKMT-203ENST00000484763 PTTG1IPP53801 180 aa13.27□□□□□ -0.29
VCPKMT-203ENST00000484763 BVES-AS1Q5T3Y7 98 aa13.26□□□□□ -0.29
VCPKMT-203ENST00000484763 TLX1NBP0CAT3 122 aa13.25□□□□□ -0.29
VCPKMT-203ENST00000484763 RPL24P83731 157 aaKnown RBP13.25□□□□□ -0.29
VCPKMT-203ENST00000484763 KMT2CQ8NEZ4 4911 aaKnown RBP13.24□□□□□ -0.29
VCPKMT-203ENST00000484763 TMEM238LA0A1B0GVL6 79 aa13.24□□□□□ -0.29
VCPKMT-203ENST00000484763 FXYD2P54710 66 aa13.24□□□□□ -0.29
VCPKMT-203ENST00000484763 SOSTDC1Q6X4U4 206 aa13.24□□□□□ -0.29
VCPKMT-203ENST00000484763 PPDPFQ9H3Y8 114 aa13.24□□□□□ -0.29
VCPKMT-203ENST00000484763 SND1-IT1Q9HBX3 110 aa13.24□□□□□ -0.29
VCPKMT-203ENST00000484763 EIF4EBP3O60516 100 aaPredicted RBP13.23□□□□□ -0.29
VCPKMT-203ENST00000484763 RYR2Q92736 4967 aa13.23□□□□□ -0.29
VCPKMT-203ENST00000484763 LOC107984640A0A0U1RRK4 108 aa13.23□□□□□ -0.29
VCPKMT-203ENST00000484763 RPL18AQ02543 176 aaKnown RBP13.23□□□□□ -0.29
VCPKMT-203ENST00000484763 BATFQ16520 125 aa13.23□□□□□ -0.29
VCPKMT-203ENST00000484763 Q6ZRP5 223 aa13.23□□□□□ -0.29
VCPKMT-203ENST00000484763 A6NJY4 79 aa13.22□□□□□ -0.29
VCPKMT-203ENST00000484763 C9orf163Q8N9P6 203 aa13.21□□□□□ -0.29
VCPKMT-203ENST00000484763 LOC107984156A0A0G2JMH3 177 aa13.2□□□□□ -0.3
VCPKMT-203ENST00000484763 GAGE2EQ4V326 116 aa13.2□□□□□ -0.3
VCPKMT-203ENST00000484763 ARL17AQ8IVW1 177 aa13.2□□□□□ -0.3
VCPKMT-203ENST00000484763 SNHG12Q9BXW3 62 aa13.2□□□□□ -0.3
VCPKMT-203ENST00000484763 GAGE2DQ9UEU5 116 aa13.2□□□□□ -0.3
VCPKMT-203ENST00000484763 FAT2Q9NYQ8 4349 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms