RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 C9orf116Q5BN46 136 aaPredicted RBP11.17□□□□□ -0.62
RNF38-207ENST00000484621 C6orf226Q5I0X4 101 aa11.17□□□□□ -0.62
RNF38-207ENST00000484621 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
RNF38-207ENST00000484621 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 TLX1NBP0CAT3 122 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 RAB5BP61020 215 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 PRR3P79522 188 aaKnown RBP11.16□□□□□ -0.62
RNF38-207ENST00000484621 PMVKQ15126 192 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 GAGE2EQ4V326 116 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 Q6ZRP5 223 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 Q8IZM0 81 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 URB1-AS1Q96HZ7 61 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 GAGE2DQ9UEU5 116 aa11.16□□□□□ -0.62
RNF38-207ENST00000484621 OXTP01178 125 aa11.15□□□□□ -0.62
RNF38-207ENST00000484621 CBLN2Q8IUK8 224 aa11.15□□□□□ -0.62
RNF38-207ENST00000484621 SLC7A5P1Q8MH63 180 aa11.15□□□□□ -0.62
RNF38-207ENST00000484621 YPEL4Q96NS1 127 aa11.15□□□□□ -0.62
RNF38-207ENST00000484621 LRP2P98164 4655 aa11.15□□□□□ -0.63
RNF38-207ENST00000484621 HBDP02042 147 aa11.14□□□□□ -0.63
RNF38-207ENST00000484621 NDUFA6P56556 154 aa11.14□□□□□ -0.63
RNF38-207ENST00000484621 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
RNF38-207ENST00000484621 A0A096LNJ9 63 aa11.13□□□□□ -0.63
RNF38-207ENST00000484621 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
RNF38-207ENST00000484621 IGLV5-45A0A087WSX0 123 aa11.11□□□□□ -0.63
RNF38-207ENST00000484621 SMIM1B2RUZ4 78 aa11.11□□□□□ -0.63
RNF38-207ENST00000484621 PDZD11Q5EBL8 140 aa11.11□□□□□ -0.63
RNF38-207ENST00000484621 FAM168BA1KXE4 195 aa11.1□□□□□ -0.63
RNF38-207ENST00000484621 PHF5AQ7RTV0 110 aaKnown RBP11.1□□□□□ -0.63
RNF38-207ENST00000484621 FAM19A5Q7Z5A7 132 aaPredicted RBP11.1□□□□□ -0.63
RNF38-207ENST00000484621 F8VRH5 84 aa11.09□□□□□ -0.63
RNF38-207ENST00000484621 H3BRM9 83 aa11.09□□□□□ -0.63
RNF38-207ENST00000484621 ATP5LO75964 103 aa11.09□□□□□ -0.63
RNF38-207ENST00000484621 SPINK8P0C7L1 97 aa11.09□□□□□ -0.63
RNF38-207ENST00000484621 CXCL5P42830 114 aa11.09□□□□□ -0.63
RNF38-207ENST00000484621 COX7B2Q8TF08 81 aa11.09□□□□□ -0.63
RNF38-207ENST00000484621 IGLC3P0DOY3 106 aa11.07□□□□□ -0.64
RNF38-207ENST00000484621 CHCHD1Q96BP2 118 aaKnown RBP11.07□□□□□ -0.64
RNF38-207ENST00000484621 TNXBP22105 4242 aa11.07□□□□□ -0.64
RNF38-207ENST00000484621 BAGE3Q86Y29 109 aa11.06□□□□□ -0.64
RNF38-207ENST00000484621 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
RNF38-207ENST00000484621 PSORS1C2Q9UIG4 136 aa11.05□□□□□ -0.64
RNF38-207ENST00000484621 M0QXV9 152 aa11.04□□□□□ -0.64
RNF38-207ENST00000484621 TRGC2P03986 189 aa11.04□□□□□ -0.64
RNF38-207ENST00000484621 MT1HL1P0DM35 61 aa11.04□□□□□ -0.64
RNF38-207ENST00000484621 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
RNF38-207ENST00000484621 SPINK6Q6UWN8 80 aa11.03□□□□□ -0.64
RNF38-207ENST00000484621 HSBP1O75506 76 aa11.02□□□□□ -0.65
RNF38-207ENST00000484621 C1orf137Q5JT78 98 aa11.02□□□□□ -0.65
RNF38-207ENST00000484621 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
RNF38-207ENST00000484621 UBE2BP63146 152 aa11.01□□□□□ -0.65
RNF38-207ENST00000484621 KRTAP7-1Q8IUC3 87 aa11.01□□□□□ -0.65
RNF38-207ENST00000484621 IFI27L1Q96BM0 104 aa11.01□□□□□ -0.65
RNF38-207ENST00000484621 C11orf86A6NJI1 115 aa11□□□□□ -0.65
RNF38-207ENST00000484621 TMEM170BQ5T4T1 132 aa11□□□□□ -0.65
RNF38-207ENST00000484621 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
RNF38-207ENST00000484621 IGLV5-39A0A0G2JS06 123 aa10.99□□□□□ -0.65
RNF38-207ENST00000484621 SRSF9Q13242 221 aaKnown RBP eCLIP10.99□□□□□ -0.65
RNF38-207ENST00000484621 REG3GQ6UW15 175 aa10.99□□□□□ -0.65
RNF38-207ENST00000484621 FAM19A2Q8N3H0 131 aa10.99□□□□□ -0.65
RNF38-207ENST00000484621 KRTAP11-1Q8IUC1 163 aa10.97□□□□□ -0.65
RNF38-207ENST00000484621 TRAV12-1A0A0B4J245 112 aa10.96□□□□□ -0.65
RNF38-207ENST00000484621 COLCA2A8K830 154 aa10.96□□□□□ -0.65
RNF38-207ENST00000484621 SERF1AO75920 110 aa10.95□□□□□ -0.66
RNF38-207ENST00000484621 C22orf24Q9Y442 160 aa10.95□□□□□ -0.66
RNF38-207ENST00000484621 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
RNF38-207ENST00000484621 PFN2P35080 140 aa10.94□□□□□ -0.66
RNF38-207ENST00000484621 ODF1Q14990 250 aa10.94□□□□□ -0.66
RNF38-207ENST00000484621 LBHQ53QV2 105 aaPredicted RBP10.94□□□□□ -0.66
RNF38-207ENST00000484621 LINC01600Q96MT4 127 aa10.94□□□□□ -0.66
RNF38-207ENST00000484621 H0Y8G0 127 aa10.93□□□□□ -0.66
RNF38-207ENST00000484621 LEPROTL1O95214 131 aa10.92□□□□□ -0.66
RNF38-207ENST00000484621 LINC00310P59036 64 aa10.91□□□□□ -0.66
RNF38-207ENST00000484621 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
RNF38-207ENST00000484621 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
RNF38-207ENST00000484621 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
RNF38-207ENST00000484621 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
RNF38-207ENST00000484621 SCO1O75880 301 aa10.9□□□□□ -0.66
RNF38-207ENST00000484621 MRPL55Q7Z7F7 128 aaKnown RBP10.9□□□□□ -0.66
RNF38-207ENST00000484621 DIRC1Q969H9 104 aa10.9□□□□□ -0.66
RNF38-207ENST00000484621 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
RNF38-207ENST00000484621 NUPR1O60356 82 aa10.88□□□□□ -0.67
RNF38-207ENST00000484621 FABP4P15090 132 aa10.88□□□□□ -0.67
RNF38-207ENST00000484621 NKAPP1Q8N9T2 125 aa10.88□□□□□ -0.67
RNF38-207ENST00000484621 HSPB8Q9UJY1 196 aa10.88□□□□□ -0.67
RNF38-207ENST00000484621 COX17Q14061 63 aa10.87□□□□□ -0.67
RNF38-207ENST00000484621 LINC00167Q96N53 147 aa10.86□□□□□ -0.67
RNF38-207ENST00000484621 SND1-IT1Q9HBX3 110 aa10.86□□□□□ -0.67
RNF38-207ENST00000484621 GAGE10A6NGK3 116 aa10.85□□□□□ -0.67
RNF38-207ENST00000484621 RPL37AP8A6NKH3 93 aa10.85□□□□□ -0.67
RNF38-207ENST00000484621 H0Y9J4 135 aa10.85□□□□□ -0.67
RNF38-207ENST00000484621 IGLV5-37A0A075B6J1 123 aa10.84□□□□□ -0.67
RNF38-207ENST00000484621 LINC00158P58513 81 aa10.84□□□□□ -0.67
RNF38-207ENST00000484621 KRTAP10-8P60410 259 aa10.83□□□□□ -0.68
RNF38-207ENST00000484621 PLNP26678 52 aa10.82□□□□□ -0.68
RNF38-207ENST00000484621 A0A0U1RRA0 63 aa10.81□□□□□ -0.68
RNF38-207ENST00000484621 ZNF861PO60384 105 aa10.81□□□□□ -0.68
RNF38-207ENST00000484621 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
RNF38-207ENST00000484621 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
RNF38-207ENST00000484621 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
RNF38-207ENST00000484621 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms