RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 HMGN2P05204 90 aaKnown RBP0.72□□□□□ -2.29
VPS13A-211ENST00000484581 WFDC2Q14508 124 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 C10orf113Q5VZT2 155 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 C6orf201Q7Z4U5 140 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 ST20Q9HBF5 79 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 LINC00846Q9NV44 126 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 RABAC1Q9UI14 185 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 NLRP1Q9C000 1473 aa0.72□□□□□ -2.29
VPS13A-211ENST00000484581 FXYD6-FXYD2A0A087WZ82 144 aa0.71□□□□□ -2.3
VPS13A-211ENST00000484581 TRBV6-1A0A0K0K1D8 114 aa0.71□□□□□ -2.3
VPS13A-211ENST00000484581 H3BUT2 72 aa0.71□□□□□ -2.3
VPS13A-211ENST00000484581 SNRPFP62306 86 aaKnown RBP0.71□□□□□ -2.3
VPS13A-211ENST00000484581 NMSQ5H8A3 153 aa0.71□□□□□ -2.3
VPS13A-211ENST00000484581 AHNAKQ09666 5890 aaKnown RBP0.71□□□□□ -2.3
VPS13A-211ENST00000484581 POLA1P09884 1462 aaPredicted RBP0.71□□□□□ -2.3
VPS13A-211ENST00000484581 IQSEC2Q5JU85 1478 aa0.71□□□□□ -2.3
VPS13A-211ENST00000484581 MAGI2Q86UL8 1455 aa0.71□□□□□ -2.3
VPS13A-211ENST00000484581 COL6A3P12111 3177 aa0.71□□□□□ -2.3
VPS13A-211ENST00000484581 POLQO75417 2590 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 CELSR2Q9HCU4 2923 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 FANCAO15360 1455 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 MYMXA0A1B0GTQ4 84 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 H0Y9P7 68 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 PLGLAQ15195 96 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 LINC00643Q86TS7 51 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 PRO0255Q9UI72 69 aa0.7□□□□□ -2.3
VPS13A-211ENST00000484581 ABCC2Q92887 1545 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 ERVK-7P63135 1459 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 A0A1B0GU69 56 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 CEBPZOSA8MTT3 80 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 DEFA5Q01523 94 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 HMGN3Q15651 99 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 C2CD3Q4AC94 2353 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 NEXMIFQ5QGS0 1516 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 KDM5DQ9BY66 1539 aa0.69□□□□□ -2.3
VPS13A-211ENST00000484581 ZFHX3Q15911 3703 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 C1orf167Q5SNV9 1468 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 KIF14Q15058 1648 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 SPTBN2O15020 2390 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 ACYP1P07311 99 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 NUP188Q5SRE5 1749 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 BVES-AS1Q5T3Y7 98 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 KIAA1551Q9HCM1 1747 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 TP53AIP1Q9HCN2 124 aa0.68□□□□□ -2.3
VPS13A-211ENST00000484581 RRBP1Q9P2E9 1410 aaKnown RBP0.68□□□□□ -2.3
VPS13A-211ENST00000484581 CLTCQ00610 1675 aaKnown RBP0.68□□□□□ -2.3
VPS13A-211ENST00000484581 A0A087WXM4 84 aa0.67□□□□□ -2.3
VPS13A-211ENST00000484581 IGLC2P0DOY2 106 aa0.67□□□□□ -2.3
VPS13A-211ENST00000484581 IGLC3P0DOY3 106 aa0.67□□□□□ -2.3
VPS13A-211ENST00000484581 DEFB112Q30KQ8 113 aa0.67□□□□□ -2.3
VPS13A-211ENST00000484581 DCAF1Q9Y4B6 1507 aa0.67□□□□□ -2.3
VPS13A-211ENST00000484581 MYO3AQ8NEV4 1616 aa0.67□□□□□ -2.3
VPS13A-211ENST00000484581 USP24Q9UPU5 2620 aa0.67□□□□□ -2.3
VPS13A-211ENST00000484581 SRCAPQ6ZRS2 3230 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 A0A1B0GUT8 65 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 I3L2K1 104 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 Q5BKY6 102 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 WFDC9Q8NEX5 89 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 SMCO4Q9NRQ5 59 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 UBE2D4Q9Y2X8 147 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 DNAJC13O75165 2243 aa0.66□□□□□ -2.3
VPS13A-211ENST00000484581 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
VPS13A-211ENST00000484581 MAP3K1Q13233 1512 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 BIVM-ERCC5R4GMW8 1640 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 ANK2Q01484 3957 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 TRBV7-4A0A0J9YYF1 115 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 LINC00959A0A1B0GUT2 108 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 H3BVH4 76 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 PDCD5O14737 125 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 CFDP00746 253 aaPredicted RBP0.64□□□□□ -2.31
VPS13A-211ENST00000484581 SMIM13P0DJ93 91 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 Q8IZM0 81 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 C18orf32Q8TCD1 76 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 GAFA1Q96PS6 74 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 DIP2BQ9P265 1576 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 DOPEY2Q9Y3R5 2298 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 USF3Q68DE3 2245 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 KNDC1Q76NI1 1749 aa0.64□□□□□ -2.31
VPS13A-211ENST00000484581 PIGYQ3MUY2 71 aa0.63□□□□□ -2.31
VPS13A-211ENST00000484581 MAP3K4Q9Y6R4 1608 aa0.63□□□□□ -2.31
VPS13A-211ENST00000484581 CUX1P39880 1505 aa0.63□□□□□ -2.31
VPS13A-211ENST00000484581 CHD9Q3L8U1 2897 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 TRAV21A0A0B4J279 112 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 ATP5EP2Q5VTU8 51 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 FXYD6Q9H0Q3 95 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 CRIPTQ9P021 101 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 PAPPAQ13219 1627 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.62□□□□□ -2.31
VPS13A-211ENST00000484581 LRRC7Q96NW7 1537 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 ANKARQ7Z5J8 1434 aa0.62□□□□□ -2.31
VPS13A-211ENST00000484581 ATP7BP35670 1465 aa0.61□□□□□ -2.31
VPS13A-211ENST00000484581 SUPT6HQ7KZ85 1726 aaKnown RBP0.61□□□□□ -2.31
VPS13A-211ENST00000484581 ABCC1P33527 1531 aa0.61□□□□□ -2.31
VPS13A-211ENST00000484581 SPTY2D1-AS1A0A0U1RR47 76 aa0.61□□□□□ -2.31
VPS13A-211ENST00000484581 UMAD1C9J7I0 102 aa0.61□□□□□ -2.31
VPS13A-211ENST00000484581 SPINK1P00995 79 aa0.61□□□□□ -2.31
VPS13A-211ENST00000484581 GNG13Q9P2W3 67 aa0.61□□□□□ -2.31
VPS13A-211ENST00000484581 HILPDAQ9Y5L2 63 aa0.61□□□□□ -2.31
VPS13A-211ENST00000484581 PTPRZ1P23471 2315 aaPredicted RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms