RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 SPATA45Q537H7 98 aa4.32□□□□□ -1.72
PDZRN3-209ENST00000484487 C6orf226Q5I0X4 101 aa4.32□□□□□ -1.72
PDZRN3-209ENST00000484487 Q8IZM0 81 aa4.32□□□□□ -1.72
PDZRN3-209ENST00000484487 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
PDZRN3-209ENST00000484487 ORAOV1Q8WV07 137 aa4.32□□□□□ -1.72
PDZRN3-209ENST00000484487 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
PDZRN3-209ENST00000484487 DNAH10Q8IVF4 4471 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 GVQW2A0A096LPI5 108 aaPredicted RBP4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 J3QQQ9 107 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 CKS1BP61024 79 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 SPAG11BQ08648 103 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 C12orf57Q99622 126 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 TOMM7Q9P0U1 55 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 PAM16Q9Y3D7 125 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 HYDINQ4G0P3 5121 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
PDZRN3-209ENST00000484487 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 LINC00587B1AMM8 73 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 USP17L23D6RBM5 183 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 HERV-K104P63124 156 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 MAJINQ3KP22 176 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 C2orf48Q96LS8 159 aa4.3□□□□□ -1.72
PDZRN3-209ENST00000484487 NDUFA1O15239 70 aa4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 DLEU1O43261 78 aa4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 COX8AP10176 69 aa4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 C15orf56Q8N910 161 aa4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 NDUFA12Q9UI09 145 aa4.29□□□□□ -1.72
PDZRN3-209ENST00000484487 FRAS1Q86XX4 4008 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 IGKV2D-26A0A0A0MRZ7 120 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 LRCOL1A6NCL2 159 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 ZNF815PA8K554 130 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 TSTD3H0UI37 97 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 GCSHP23434 173 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 CIRBPQ14011 172 aaKnown RBP4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 KIAA0087Q14695 138 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 SLC25A34Q6PIV7 304 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 BOD1L2Q8IYS8 172 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 CAMK2N2Q96S95 79 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 PKIGQ9Y2B9 76 aa4.28□□□□□ -1.72
PDZRN3-209ENST00000484487 A0A087WTM6 91 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 TRBV30A0A0K0K1B3 111 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 LECT2O14960 151 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 TSPEAR-AS2P59090 65 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 COX17Q14061 63 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 RNF151Q2KHN1 245 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 SCGB1D4Q6XE38 83 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 LINC00336Q6ZUF6 198 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 ZNF625Q96I27 306 aaPredicted RBP4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 C14orf144Q96I85 54 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 UQCR10Q9UDW1 63 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 RYR2Q92736 4967 aa4.27□□□□□ -1.73
PDZRN3-209ENST00000484487 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 TIMM17BO60830 172 aa4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 CNBPP62633 177 aaKnown RBP4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 Q8N814 137 aa4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 COPS9Q8WXC6 57 aa4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 CARD19Q96LW7 228 aa4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 KRTAP17-1Q9BYP8 105 aa4.26□□□□□ -1.73
PDZRN3-209ENST00000484487 KMT2CQ8NEZ4 4911 aaKnown RBP4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 TMEM238C9JI98 176 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 RTL8CO15255 209 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 UNQ6190/PRO20217Q6UXQ8 127 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 Q6ZRU5 148 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 Q6ZVH6 145 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 MIEN1Q9BRT3 115 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 PRO1933Q9H354 126 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 HIGD1BQ9P298 99 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 ERG28Q9UKR5 140 aa4.25□□□□□ -1.73
PDZRN3-209ENST00000484487 LINC00158P58513 81 aa4.24□□□□□ -1.73
PDZRN3-209ENST00000484487 WFDC2Q14508 124 aa4.24□□□□□ -1.73
PDZRN3-209ENST00000484487 TTTY13Q9BZ97 58 aa4.24□□□□□ -1.73
PDZRN3-209ENST00000484487 C6orf48Q9UBA6 75 aa4.24□□□□□ -1.73
PDZRN3-209ENST00000484487 FAT2Q9NYQ8 4349 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 NDUFC2-KCTD14E9PQ53 114 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 TLX1NBP0CAT3 122 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 PFN2P35080 140 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 HNRNPA3P51991 378 aaKnown RBP4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 TAL2Q16559 108 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 SPANXB1Q9NS25 103 aaPredicted RBP4.23□□□□□ -1.73
PDZRN3-209ENST00000484487 RYR3Q15413 4870 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms