RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 RPL39P62891 51 aaKnown RBP3.86□□□□□ -1.79
PTCD3-215ENST00000484203 PRR3P79522 188 aaKnown RBP3.86□□□□□ -1.79
PTCD3-215ENST00000484203 GAGE2BQ13066 116 aa3.86□□□□□ -1.79
PTCD3-215ENST00000484203 SPINK6Q6UWN8 80 aa3.86□□□□□ -1.79
PTCD3-215ENST00000484203 Q8N8P6 123 aa3.86□□□□□ -1.79
PTCD3-215ENST00000484203 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
PTCD3-215ENST00000484203 VCX2Q9H322 139 aa3.86□□□□□ -1.79
PTCD3-215ENST00000484203 TRBV30A0A0K0K1B3 111 aa3.85□□□□□ -1.79
PTCD3-215ENST00000484203 LOC105371267A0A1B0GV96 52 aa3.85□□□□□ -1.79
PTCD3-215ENST00000484203 PRSS2P07478 247 aa3.85□□□□□ -1.79
PTCD3-215ENST00000484203 TLX1NBP0CAT3 122 aa3.85□□□□□ -1.79
PTCD3-215ENST00000484203 RPL18AQ02543 176 aaKnown RBP3.85□□□□□ -1.79
PTCD3-215ENST00000484203 RNASE13Q5GAN3 156 aaKnown RBP3.85□□□□□ -1.79
PTCD3-215ENST00000484203 C2orf66Q6UXQ4 117 aa3.85□□□□□ -1.79
PTCD3-215ENST00000484203 PACRGQ96M98 296 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-215ENST00000484203 IGLV4-3A0A075B6K6 122 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 LOC389332A0A1B0GUA5 103 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 TMEM218A2RU14 115 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-215ENST00000484203 MT-ND6P03923 174 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 HERVK_113P63121 156 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 LINC00242Q5T6M2 205 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 LINC00526Q96FQ7 95 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 TIMM17AQ99595 171 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 SEC11CQ9BY50 192 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 GNB1LQ9BYB4 327 aa3.84□□□□□ -1.79
PTCD3-215ENST00000484203 CXCL5P42830 114 aa3.83□□□□□ -1.8
PTCD3-215ENST00000484203 UBE2D1P51668 147 aa3.83□□□□□ -1.8
PTCD3-215ENST00000484203 HNRNPA3P51991 378 aaKnown RBP3.83□□□□□ -1.8
PTCD3-215ENST00000484203 CKS1BP61024 79 aa3.83□□□□□ -1.8
PTCD3-215ENST00000484203 C9orf116Q5BN46 136 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-215ENST00000484203 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
PTCD3-215ENST00000484203 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
PTCD3-215ENST00000484203 LINC01600Q96MT4 127 aa3.83□□□□□ -1.8
PTCD3-215ENST00000484203 AMELXQ99217 191 aa3.83□□□□□ -1.8
PTCD3-215ENST00000484203 OPRPNQ99935 248 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-215ENST00000484203 GEMIN7Q9H840 131 aaKnown RBP3.83□□□□□ -1.8
PTCD3-215ENST00000484203 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
PTCD3-215ENST00000484203 HMCN2Q8NDA2 5059 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 A0A0J9YXV3 536 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 IGIPA6NJ69 53 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 NDUFC2-KCTD14E9PQ53 114 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.8
PTCD3-215ENST00000484203 RHEBQ15382 184 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 ERASQ7Z444 233 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 Q8IZM0 81 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 TOMM6Q96B49 74 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 PAM16Q9Y3D7 125 aa3.82□□□□□ -1.8
PTCD3-215ENST00000484203 KIAA0087Q14695 138 aa3.81□□□□□ -1.8
PTCD3-215ENST00000484203 LBHQ53QV2 105 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-215ENST00000484203 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
PTCD3-215ENST00000484203 DIRC1Q969H9 104 aa3.81□□□□□ -1.8
PTCD3-215ENST00000484203 SCGB3A1Q96QR1 104 aa3.81□□□□□ -1.8
PTCD3-215ENST00000484203 ALKBH7Q9BT30 221 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-215ENST00000484203 C6orf48Q9UBA6 75 aa3.81□□□□□ -1.8
PTCD3-215ENST00000484203 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
PTCD3-215ENST00000484203 TINCRA0A1B0GVN0 87 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 A0A1W2PNN7 141 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 GAGE10A6NGK3 116 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 LINC01546A6NGU7 62 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 F8VRH5 84 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 H3BRM9 83 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 GAGE2EQ4V326 116 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 C1orf137Q5JT78 98 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 FA2HQ7L5A8 372 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 SMCO4Q9NRQ5 59 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 GAGE2DQ9UEU5 116 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 PSORS1C2Q9UIG4 136 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 PKHD1L1Q86WI1 4243 aa3.8□□□□□ -1.8
PTCD3-215ENST00000484203 ADCYAP1P18509 176 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 RAB5BP61020 215 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 UBE2BP63146 152 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 FABP9Q0Z7S8 132 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 PDZD11Q5EBL8 140 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 SFTA2Q6UW10 78 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 LINC00173Q6ZV60 143 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 COMMD7Q86VX2 200 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 LINC00469Q8N7U9 141 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 TOMM7Q9P0U1 55 aa3.79□□□□□ -1.8
PTCD3-215ENST00000484203 CARHSP1Q9Y2V2 147 aaKnown RBP3.79□□□□□ -1.8
PTCD3-215ENST00000484203 IGLV5-45A0A087WSX0 123 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 M0QXV9 152 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 NUPR1O60356 82 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 IGLV7-43P04211 117 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 KRTAP10-8P60410 259 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 PMVKQ15126 192 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 C10orf91Q5T1B1 145 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 C2orf82Q6UX34 121 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
PTCD3-215ENST00000484203 FAM19A5Q7Z5A7 132 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-215ENST00000484203 SVBPQ8N300 66 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 CST9LQ9H4G1 147 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 RPS10P5Q9NQ39 176 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 TP73-AS1Q9UF72 201 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 CDKN2A-AS1Q9UH64 79 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 UBR4Q5T4S7 5183 aa3.78□□□□□ -1.8
PTCD3-215ENST00000484203 IGLV1-50A0A075B6I6 118 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms