RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
CPSF4-213ENST00000484112 PYY3Q5JQD4 70 aa6.37□□□□□ -1.39
CPSF4-213ENST00000484112 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
CPSF4-213ENST00000484112 HBDP02042 147 aa6.36□□□□□ -1.39
CPSF4-213ENST00000484112 SPAG11BQ08648 103 aa6.36□□□□□ -1.39
CPSF4-213ENST00000484112 PMVKQ15126 192 aa6.36□□□□□ -1.39
CPSF4-213ENST00000484112 ORAOV1Q8WV07 137 aa6.36□□□□□ -1.39
CPSF4-213ENST00000484112 CAMK2N2Q96S95 79 aa6.36□□□□□ -1.39
CPSF4-213ENST00000484112 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
CPSF4-213ENST00000484112 TINCRA0A1B0GVN0 87 aa6.35□□□□□ -1.39
CPSF4-213ENST00000484112 NDUFA1O15239 70 aa6.35□□□□□ -1.39
CPSF4-213ENST00000484112 ATP5LO75964 103 aa6.35□□□□□ -1.39
CPSF4-213ENST00000484112 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
CPSF4-213ENST00000484112 COX6A2Q02221 97 aa6.35□□□□□ -1.39
CPSF4-213ENST00000484112 SPACA4Q8TDM5 124 aa6.35□□□□□ -1.39
CPSF4-213ENST00000484112 GEMIN7Q9H840 131 aaKnown RBP6.35□□□□□ -1.39
CPSF4-213ENST00000484112 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
CPSF4-213ENST00000484112 LOC107984640A0A0U1RRK4 108 aa6.34□□□□□ -1.39
CPSF4-213ENST00000484112 DPH3Q96FX2 82 aa6.34□□□□□ -1.39
CPSF4-213ENST00000484112 URB1-AS1Q96HZ7 61 aa6.34□□□□□ -1.39
CPSF4-213ENST00000484112 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
CPSF4-213ENST00000484112 IGLV5-45A0A087WSX0 123 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 A0A096LNJ9 63 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 PANO1I0J062 215 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 S100A12P80511 92 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 Q6ZRU5 148 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 Q8IZM0 81 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 PLAC8Q9NZF1 115 aa6.33□□□□□ -1.4
CPSF4-213ENST00000484112 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
CPSF4-213ENST00000484112 HSBP1O75506 76 aa6.32□□□□□ -1.4
CPSF4-213ENST00000484112 PRSS2P07478 247 aa6.32□□□□□ -1.4
CPSF4-213ENST00000484112 CXCL5P42830 114 aa6.32□□□□□ -1.4
CPSF4-213ENST00000484112 KIAA0087Q14695 138 aa6.32□□□□□ -1.4
CPSF4-213ENST00000484112 LINC00526Q96FQ7 95 aa6.32□□□□□ -1.4
CPSF4-213ENST00000484112 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 A0A087WYN8 130 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 A0A0J9YXV3 536 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 H3BRM9 83 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 IGLC3P0DOY3 106 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 PTTG1IPP53801 180 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 ZC2HC1BQ5TFG8 222 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 CDKN2A-AS1Q9UH64 79 aa6.31□□□□□ -1.4
CPSF4-213ENST00000484112 A0A096LNI7 61 aa6.3□□□□□ -1.4
CPSF4-213ENST00000484112 CKS1BP61024 79 aa6.3□□□□□ -1.4
CPSF4-213ENST00000484112 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
CPSF4-213ENST00000484112 LINC00469Q8N7U9 141 aa6.3□□□□□ -1.4
CPSF4-213ENST00000484112 TRAV12-1A0A0B4J245 112 aa6.29□□□□□ -1.4
CPSF4-213ENST00000484112 IGKV2-24A0A0C4DH68 120 aa6.29□□□□□ -1.4
CPSF4-213ENST00000484112 CHTF8P0CG12 524 aa6.29□□□□□ -1.4
CPSF4-213ENST00000484112 C6orf226Q5I0X4 101 aa6.29□□□□□ -1.4
CPSF4-213ENST00000484112 STPG4Q8N801 248 aa6.29□□□□□ -1.4
CPSF4-213ENST00000484112 C7orf33Q8WU49 177 aa6.29□□□□□ -1.4
CPSF4-213ENST00000484112 SMIM1B2RUZ4 78 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 F8VRH5 84 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 ODF1Q14990 250 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 PMCHL1Q16048 86 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 UNQ6190/PRO20217Q6UXQ8 127 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 FAM19A2Q8N3H0 131 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 IFI27L1Q96BM0 104 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 C6orf48Q9UBA6 75 aa6.28□□□□□ -1.4
CPSF4-213ENST00000484112 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
CPSF4-213ENST00000484112 C3orf79P0CE67 100 aa6.27□□□□□ -1.41
CPSF4-213ENST00000484112 RPL18AQ02543 176 aaKnown RBP6.27□□□□□ -1.41
CPSF4-213ENST00000484112 GAGE2BQ13066 116 aa6.27□□□□□ -1.41
CPSF4-213ENST00000484112 TOMM7Q9P0U1 55 aa6.27□□□□□ -1.41
CPSF4-213ENST00000484112 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
CPSF4-213ENST00000484112 LEPROTL1O95214 131 aa6.26□□□□□ -1.41
CPSF4-213ENST00000484112 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
CPSF4-213ENST00000484112 C10orf25Q5T742 122 aa6.26□□□□□ -1.41
CPSF4-213ENST00000484112 COX7B2Q8TF08 81 aa6.26□□□□□ -1.41
CPSF4-213ENST00000484112 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
CPSF4-213ENST00000484112 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
CPSF4-213ENST00000484112 ZNF22P17026 224 aaPredicted RBP6.25□□□□□ -1.41
CPSF4-213ENST00000484112 KRTDAPP60985 99 aa6.25□□□□□ -1.41
CPSF4-213ENST00000484112 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
CPSF4-213ENST00000484112 C2orf82Q6UX34 121 aa6.25□□□□□ -1.41
CPSF4-213ENST00000484112 Q6ZRP5 223 aa6.25□□□□□ -1.41
CPSF4-213ENST00000484112 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
CPSF4-213ENST00000484112 LRP2P98164 4655 aa6.25□□□□□ -1.41
CPSF4-213ENST00000484112 C20orf202A1L168 122 aa6.23□□□□□ -1.41
CPSF4-213ENST00000484112 TSTD3H0UI37 97 aa6.23□□□□□ -1.41
CPSF4-213ENST00000484112 SYS1-DBNDD2H3BUS1 97 aa6.23□□□□□ -1.41
CPSF4-213ENST00000484112 SPINK8P0C7L1 97 aa6.23□□□□□ -1.41
CPSF4-213ENST00000484112 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
CPSF4-213ENST00000484112 LINC01600Q96MT4 127 aa6.23□□□□□ -1.41
CPSF4-213ENST00000484112 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
CPSF4-213ENST00000484112 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
CPSF4-213ENST00000484112 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
CPSF4-213ENST00000484112 LINC01545Q5VT33 79 aa6.22□□□□□ -1.41
CPSF4-213ENST00000484112 VAMP8Q9BV40 100 aa6.22□□□□□ -1.41
CPSF4-213ENST00000484112 A0A1W2PNN7 141 aa6.21□□□□□ -1.42
CPSF4-213ENST00000484112 PCP4L1A6NKN8 68 aa6.21□□□□□ -1.42
CPSF4-213ENST00000484112 PLNP26678 52 aa6.21□□□□□ -1.42
CPSF4-213ENST00000484112 COX17Q14061 63 aa6.21□□□□□ -1.42
CPSF4-213ENST00000484112 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
CPSF4-213ENST00000484112 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
CPSF4-213ENST00000484112 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
CPSF4-213ENST00000484112 PRR3P79522 188 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms