RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 CNTRLQ7Z7A1 2325 aa2.85□□□□□ -1.95
LTN1-205ENST00000483326 IGLV1-50A0A075B6I6 118 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 IGKV3D-15A0A087WSY6 115 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 TRBV6-8A0A0A6YYG3 113 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 IGHV3-66A0A0C4DH42 116 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 BPY2O14599 106 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 NCR3O14931 201 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 RPL39P62891 51 aaKnown RBP2.84□□□□□ -1.95
LTN1-205ENST00000483326 GPHB5Q86YW7 130 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 MIR7-3HGQ8N6C7 128 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 ZNF625Q96I27 306 aaPredicted RBP2.84□□□□□ -1.95
LTN1-205ENST00000483326 LINC00574Q9H8X3 128 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 DSCAMO60469 2012 aa2.84□□□□□ -1.95
LTN1-205ENST00000483326 ZZEF1O43149 2961 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 PIEZO2Q9H5I5 2752 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 TRAV10A0A0B4J240 114 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 NDUFAF8A1L188 74 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 IGHV3-11P01762 117 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 CGB3P0DN86 165 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 CGB7P0DN87 165 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 KIF25-AS1Q9Y6Z4 181 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 FREM2Q5SZK8 3169 aa2.84□□□□□ -1.96
LTN1-205ENST00000483326 A6NN06 94 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 I3L2K1 104 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 LECT2O14960 151 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 IGKV1-17P01599 117 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 ASB16-AS1Q495Z4 193 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 LINC01554Q52M75 96 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 RNF5Q99942 180 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 ZNF706Q9Y5V0 76 aaPredicted RBP2.83□□□□□ -1.96
LTN1-205ENST00000483326 U3KQA8 63 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 CFAP47Q6ZTR5 3102 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 LAMA5O15230 3695 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 IGSF10Q6WRI0 2623 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 TLN1Q9Y490 2541 aaKnown RBP2.83□□□□□ -1.96
LTN1-205ENST00000483326 MED12Q93074 2177 aa2.83□□□□□ -1.96
LTN1-205ENST00000483326 DSCAML1Q8TD84 2053 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 LOC110117498A0A087WWA1 95 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 A6NED7 52 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 SRRM5B3KS81 715 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 PRM2P04554 102 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 CTSGP08311 255 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 C1orf64Q8NEQ6 169 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 PATE1Q8WXA2 126 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 LEAP2Q969E1 77 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 NBEAQ8NFP9 2946 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 MGAQ8IWI9 3026 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 IGLV3-12A0A075B6K2 115 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 IGHV3-21A0A0B4J1V1 117 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 IGHV3-72A0A0B4J1Y9 119 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 C16orf90A8MZG2 172 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 GNRH2O43555 120 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 PSCAO43653 123 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 INSP01308 110 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 IGKV3-20P01619 116 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 ITLN2Q8WWU7 325 aaPredicted RBP2.82□□□□□ -1.96
LTN1-205ENST00000483326 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 NBASA2RRP1 2371 aa2.82□□□□□ -1.96
LTN1-205ENST00000483326 SPEGQ15772 3267 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 PRRC2CQ9Y520 2896 aaKnown RBP2.81□□□□□ -1.96
LTN1-205ENST00000483326 ASPMQ8IZT6 3477 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 IGLV11-55A0A075B6I3 123 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 A0A087WYN8 130 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 ELOF1P60002 83 aaKnown RBP2.81□□□□□ -1.96
LTN1-205ENST00000483326 SDK2Q58EX2 2172 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 C9orf116Q5BN46 136 aaPredicted RBP2.81□□□□□ -1.96
LTN1-205ENST00000483326 C10orf55Q5SWW7 151 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 FAM74A4Q5TZK3 123 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 SMIM11BQ8TCY0 68 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 HELZ2Q9BYK8 2649 aaKnown RBP2.81□□□□□ -1.96
LTN1-205ENST00000483326 SND1-IT1Q9HBX3 110 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 MYO18BQ8IUG5 2567 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 ITPR1Q14643 2758 aa2.81□□□□□ -1.96
LTN1-205ENST00000483326 PRRC2AP48634 2157 aaKnown RBP2.8□□□□□ -1.96
LTN1-205ENST00000483326 IGHV3-64DA0A0J9YX35 117 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 TRBV10-1A0A0K0K1A3 114 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 IGHV1-8P0DP01 117 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 Q5VV11 94 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 IGFL3Q6UXB1 125 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 C16orf74Q96GX8 76 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 LINC00167Q96N53 147 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 C8orf17Q9NRJ1 99 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 FREM1Q5H8C1 2179 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 KALRNO60229 2985 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 BAHCC1Q9P281 2608 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 MED13Q9UHV7 2174 aa2.8□□□□□ -1.96
LTN1-205ENST00000483326 ZNF407Q9C0G0 2248 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 LRCOL1A6NCL2 159 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 K7EIM0 57 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 LINC00313P59037 77 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 HIGD2BQ4VC39 106 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 Q6ZQT0 140 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 Q8N814 137 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 CELA1Q9UNI1 258 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 SVILO95425 2214 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 COL27A1Q8IZC6 1860 aaPredicted RBP2.79□□□□□ -1.96
LTN1-205ENST00000483326 ATMQ13315 3056 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 CELSR3Q9NYQ7 3312 aa2.79□□□□□ -1.96
LTN1-205ENST00000483326 A0A1W2PNU3 283 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms