RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 TNFSF15O95150 251 aa-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 SMR3BP02814 79 aaPredicted RBP-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 HIST1H1AQ02539 215 aaPredicted RBP-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 MMGT1Q8N4V1 131 aa-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 MT1LQ93083 61 aa-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 ATPIF1Q9UII2 106 aa-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 HIGD1AQ9Y241 93 aa-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 ARL2-SNX15V9GYD0 113 aa-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 CLIP1P30622 1438 aa-1.92□□□□□ -2.72
GTDC1-216ENST00000482961 MYH7P12883 1935 aa-1.93□□□□□ -2.72
GTDC1-216ENST00000482961 FAM236AA0A1B0GUQ0 79 aa-1.93□□□□□ -2.72
GTDC1-216ENST00000482961 FAM236BA0A1B0GV22 79 aa-1.93□□□□□ -2.72
GTDC1-216ENST00000482961 TMEM128Q5BJH2 165 aa-1.93□□□□□ -2.72
GTDC1-216ENST00000482961 HOPXQ9BPY8 73 aaPredicted RBP-1.93□□□□□ -2.72
GTDC1-216ENST00000482961 MYH13Q9UKX3 1938 aa-1.93□□□□□ -2.72
GTDC1-216ENST00000482961 ANKRD30AQ9BXX3 1397 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 TMEM2Q9UHN6 1383 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 SPTY2D1-AS1A0A0U1RR47 76 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 CHKB-CPT1BH3BT56 60 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 SAMD13Q5VXD3 122 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 TRIQKQ629K1 86 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 FAM223AQ8IWN6 122 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 MT1MQ8N339 61 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 GID8Q9NWU2 228 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 BTAF1O14981 1849 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 SYNJ1O43426 1573 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 NWD2Q9ULI1 1742 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 C1orf167Q5SNV9 1468 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 ZNF518AQ6AHZ1 1483 aa-1.94□□□□□ -2.72
GTDC1-216ENST00000482961 SPTBN5Q9NRC6 3674 aaKnown RBP-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 RIMS1Q86UR5 1692 aaKnown RBP-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 A0A1B0GWA3 101 aa-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 MT1BP07438 61 aa-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 SCTP09683 121 aa-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 KRTAP20-1Q3LI63 56 aa-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 C9orf153Q5TBE3 101 aa-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 CLPSL2Q6UWE3 100 aa-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 PRG4Q92954 1404 aaPredicted RBP-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 CAMSAP1Q5T5Y3 1602 aa-1.95□□□□□ -2.72
GTDC1-216ENST00000482961 A0A0G2JMZ2 1700 aa-1.96□□□□□ -2.72
GTDC1-216ENST00000482961 NCOA3Q9Y6Q9 1424 aa-1.96□□□□□ -2.72
GTDC1-216ENST00000482961 TRAV36DV7A0A075B6V5 113 aa-1.96□□□□□ -2.72
GTDC1-216ENST00000482961 MT2AP02795 61 aa-1.96□□□□□ -2.72
GTDC1-216ENST00000482961 PRLHP81277 87 aa-1.96□□□□□ -2.72
GTDC1-216ENST00000482961 NMSQ5H8A3 153 aa-1.96□□□□□ -2.72
GTDC1-216ENST00000482961 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.96□□□□□ -2.72
GTDC1-216ENST00000482961 BOD1L1Q8NFC6 3051 aa-1.97□□□□□ -2.72
GTDC1-216ENST00000482961 TOMM20LQ6UXN7 152 aa-1.97□□□□□ -2.72
GTDC1-216ENST00000482961 C6orf201Q7Z4U5 140 aa-1.97□□□□□ -2.72
GTDC1-216ENST00000482961 C5orf38Q86SI9 138 aa-1.97□□□□□ -2.72
GTDC1-216ENST00000482961 KCNRGQ8N5I3 272 aa-1.97□□□□□ -2.72
GTDC1-216ENST00000482961 PSENENQ9NZ42 101 aa-1.97□□□□□ -2.72
GTDC1-216ENST00000482961 UBE2D4Q9Y2X8 147 aa-1.97□□□□□ -2.72
GTDC1-216ENST00000482961 ARAP2Q8WZ64 1704 aa-1.97□□□□□ -2.73
GTDC1-216ENST00000482961 EIF3AQ14152 1382 aaKnown RBP-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 BCORQ6W2J9 1755 aa-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 PLEKHH2Q8IVE3 1493 aa-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 IGLC6P0CF74 106 aa-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 NEFHP12036 1026 aa-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 MYOZ3Q8TDC0 251 aa-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 UQCR10Q9UDW1 63 aa-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 MYH6P13533 1939 aa-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 MARF1Q9Y4F3 1742 aaKnown RBP-1.98□□□□□ -2.73
GTDC1-216ENST00000482961 NDUFA3O95167 84 aa-1.99□□□□□ -2.73
GTDC1-216ENST00000482961 S100GP29377 79 aa-1.99□□□□□ -2.73
GTDC1-216ENST00000482961 PCBD2Q9H0N5 130 aa-1.99□□□□□ -2.73
GTDC1-216ENST00000482961 SYNMO15061 1565 aa-1.99□□□□□ -2.73
GTDC1-216ENST00000482961 DNAH10Q8IVF4 4471 aa-1.99□□□□□ -2.73
GTDC1-216ENST00000482961 NLRP1Q9C000 1473 aa-2□□□□□ -2.73
GTDC1-216ENST00000482961 DOCK2Q92608 1830 aa-2□□□□□ -2.73
GTDC1-216ENST00000482961 TRBV7-7A0A0K0K1E9 115 aa-2□□□□□ -2.73
GTDC1-216ENST00000482961 A0A1B0GX51 115 aa-2□□□□□ -2.73
GTDC1-216ENST00000482961 J3QR89 54 aa-2□□□□□ -2.73
GTDC1-216ENST00000482961 TFAMQ00059 246 aaKnown RBP-2□□□□□ -2.73
GTDC1-216ENST00000482961 LINC00694P0DN24 101 aa-2.01□□□□□ -2.73
GTDC1-216ENST00000482961 GUCA1AP43080 201 aaPredicted RBP-2.01□□□□□ -2.73
GTDC1-216ENST00000482961 GNGT1P63211 74 aa-2.01□□□□□ -2.73
GTDC1-216ENST00000482961 SFTA2Q6UW10 78 aa-2.01□□□□□ -2.73
GTDC1-216ENST00000482961 SKA2Q8WVK7 121 aaPredicted RBP-2.01□□□□□ -2.73
GTDC1-216ENST00000482961 SNRNP25Q9BV90 132 aaKnown RBP-2.01□□□□□ -2.73
GTDC1-216ENST00000482961 LINC00846Q9NV44 126 aa-2.01□□□□□ -2.73
GTDC1-216ENST00000482961 ALKQ9UM73 1620 aa-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 XRN1Q8IZH2 1706 aaKnown RBP-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 A0A0G2JND7 137 aa-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 TMEM238C9JI98 176 aa-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 K7ERU9 68 aa-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 ARMS2P0C7Q2 107 aa-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 SAA2P0DJI9 122 aaPredicted RBP-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 TET3O43151 1660 aa-2.02□□□□□ -2.73
GTDC1-216ENST00000482961 FAM223BA6NKX1 122 aa-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 DBIP07108 87 aaKnown RBP-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 TRAPPC2P0DI81 140 aa-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 TRAPPC2BP0DI82 140 aa-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 CCDC153Q494R4 210 aa-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 C12orf73Q69YU5 71 aa-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 EDC4Q6P2E9 1401 aaKnown RBP-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 MGAQ8IWI9 3026 aa-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 SPENQ96T58 3664 aaKnown RBP-2.03□□□□□ -2.73
GTDC1-216ENST00000482961 PSME4Q14997 1843 aa-2.04□□□□□ -2.74
GTDC1-216ENST00000482961 COX6B2Q6YFQ2 88 aa-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms