RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 COX7B2Q8TF08 81 aa13.02□□□□□ -0.33
TRAPPC12-220ENST00000482645 PRSS2P07478 247 aa13.01□□□□□ -0.33
TRAPPC12-220ENST00000482645 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
TRAPPC12-220ENST00000482645 GVQW2A0A096LPI5 108 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-220ENST00000482645 ZNF561-AS1K7EIQ3 104 aa13□□□□□ -0.33
TRAPPC12-220ENST00000482645 LINC00518Q8N0U6 118 aa13□□□□□ -0.33
TRAPPC12-220ENST00000482645 NTN5Q8WTR8 489 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-220ENST00000482645 PLEKHB2Q96CS7 222 aa13□□□□□ -0.33
TRAPPC12-220ENST00000482645 C16orf90A8MZG2 172 aa12.99□□□□□ -0.33
TRAPPC12-220ENST00000482645 J3QQQ9 107 aa12.99□□□□□ -0.33
TRAPPC12-220ENST00000482645 LGALS3P17931 250 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-220ENST00000482645 Q8IZM0 81 aa12.99□□□□□ -0.33
TRAPPC12-220ENST00000482645 C12orf57Q99622 126 aa12.99□□□□□ -0.33
TRAPPC12-220ENST00000482645 TTTY13Q9BZ97 58 aa12.98□□□□□ -0.33
TRAPPC12-220ENST00000482645 LINC01620Q4KN68 170 aa12.97□□□□□ -0.33
TRAPPC12-220ENST00000482645 C6orf226Q5I0X4 101 aa12.97□□□□□ -0.33
TRAPPC12-220ENST00000482645 KIAA0087Q14695 138 aa12.96□□□□□ -0.33
TRAPPC12-220ENST00000482645 SLPIP03973 132 aa12.95□□□□□ -0.34
TRAPPC12-220ENST00000482645 CKS1BP61024 79 aa12.95□□□□□ -0.34
TRAPPC12-220ENST00000482645 PCP2Q8IVA1 136 aa12.95□□□□□ -0.34
TRAPPC12-220ENST00000482645 C2orf82Q6UX34 121 aa12.94□□□□□ -0.34
TRAPPC12-220ENST00000482645 NDUFA12Q9UI09 145 aa12.94□□□□□ -0.34
TRAPPC12-220ENST00000482645 DYNC1H1Q14204 4646 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 CAMK2N2Q96S95 79 aa12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 TP73-AS1Q9UF72 201 aa12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 ZNF815PA8K554 130 aa12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 GCSHP23434 173 aa12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 CXCL5P42830 114 aa12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 CNBPP62633 177 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-220ENST00000482645 NDUFA1O15239 70 aa12.91□□□□□ -0.34
TRAPPC12-220ENST00000482645 SYCNQ0VAF6 134 aa12.91□□□□□ -0.34
TRAPPC12-220ENST00000482645 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-220ENST00000482645 C14orf144Q96I85 54 aa12.91□□□□□ -0.34
TRAPPC12-220ENST00000482645 CARD19Q96LW7 228 aa12.91□□□□□ -0.34
TRAPPC12-220ENST00000482645 LRP1BQ9NZR2 4599 aa12.91□□□□□ -0.34
TRAPPC12-220ENST00000482645 MYMXA0A1B0GTQ4 84 aa12.9□□□□□ -0.34
TRAPPC12-220ENST00000482645 COX8AP10176 69 aa12.9□□□□□ -0.34
TRAPPC12-220ENST00000482645 C2orf48Q96LS8 159 aa12.9□□□□□ -0.34
TRAPPC12-220ENST00000482645 UNQ6190/PRO20217Q6UXQ8 127 aa12.89□□□□□ -0.35
TRAPPC12-220ENST00000482645 Q6ZRU5 148 aa12.89□□□□□ -0.35
TRAPPC12-220ENST00000482645 KRTAP10-1P60331 282 aa12.88□□□□□ -0.35
TRAPPC12-220ENST00000482645 C10orf25Q5T742 122 aa12.88□□□□□ -0.35
TRAPPC12-220ENST00000482645 C9orf163Q8N9P6 203 aa12.88□□□□□ -0.35
TRAPPC12-220ENST00000482645 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
TRAPPC12-220ENST00000482645 PRO1933Q9H354 126 aa12.88□□□□□ -0.35
TRAPPC12-220ENST00000482645 SCGB1D4Q6XE38 83 aa12.86□□□□□ -0.35
TRAPPC12-220ENST00000482645 BOD1L2Q8IYS8 172 aa12.86□□□□□ -0.35
TRAPPC12-220ENST00000482645 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
TRAPPC12-220ENST00000482645 F8WDY8 70 aa12.85□□□□□ -0.35
TRAPPC12-220ENST00000482645 HERV-K104P63124 156 aa12.85□□□□□ -0.35
TRAPPC12-220ENST00000482645 SLC25A34Q6PIV7 304 aa12.85□□□□□ -0.35
TRAPPC12-220ENST00000482645 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
TRAPPC12-220ENST00000482645 MEIG1Q5JSS6 88 aa12.84□□□□□ -0.35
TRAPPC12-220ENST00000482645 C9orf116Q5BN46 136 aaPredicted RBP12.83□□□□□ -0.35
TRAPPC12-220ENST00000482645 TRBV30A0A0K0K1B3 111 aa12.83□□□□□ -0.36
TRAPPC12-220ENST00000482645 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
TRAPPC12-220ENST00000482645 DLEU1O43261 78 aa12.82□□□□□ -0.36
TRAPPC12-220ENST00000482645 A0A0U1RRA0 63 aa12.81□□□□□ -0.36
TRAPPC12-220ENST00000482645 PFN2P35080 140 aa12.81□□□□□ -0.36
TRAPPC12-220ENST00000482645 UQCR10Q9UDW1 63 aa12.81□□□□□ -0.36
TRAPPC12-220ENST00000482645 SDIM1Q6ZPB5 146 aa12.8□□□□□ -0.36
TRAPPC12-220ENST00000482645 TSTD3H0UI37 97 aa12.79□□□□□ -0.36
TRAPPC12-220ENST00000482645 SMIM13P0DJ93 91 aa12.79□□□□□ -0.36
TRAPPC12-220ENST00000482645 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
TRAPPC12-220ENST00000482645 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
TRAPPC12-220ENST00000482645 FAM30AQ9NZY2 134 aa12.78□□□□□ -0.36
TRAPPC12-220ENST00000482645 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
TRAPPC12-220ENST00000482645 LINC00158P58513 81 aa12.78□□□□□ -0.36
TRAPPC12-220ENST00000482645 HAMPP81172 84 aa12.78□□□□□ -0.36
TRAPPC12-220ENST00000482645 RPL18AQ02543 176 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-220ENST00000482645 CHTF8P0CG12 524 aa12.77□□□□□ -0.37
TRAPPC12-220ENST00000482645 RNF151Q2KHN1 245 aa12.77□□□□□ -0.37
TRAPPC12-220ENST00000482645 C2orf91Q6ZV80 131 aa12.77□□□□□ -0.37
TRAPPC12-220ENST00000482645 DAND5Q8N907 189 aa12.77□□□□□ -0.37
TRAPPC12-220ENST00000482645 APOBP04114 4563 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-220ENST00000482645 LOC107984640A0A0U1RRK4 108 aa12.76□□□□□ -0.37
TRAPPC12-220ENST00000482645 GAGE2BQ13066 116 aa12.76□□□□□ -0.37
TRAPPC12-220ENST00000482645 CIRBPQ14011 172 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-220ENST00000482645 MIEN1Q9BRT3 115 aa12.76□□□□□ -0.37
TRAPPC12-220ENST00000482645 A0A096LNI7 61 aa12.75□□□□□ -0.37
TRAPPC12-220ENST00000482645 LINC00587B1AMM8 73 aa12.75□□□□□ -0.37
TRAPPC12-220ENST00000482645 TMEM238C9JI98 176 aa12.75□□□□□ -0.37
TRAPPC12-220ENST00000482645 LITAFQ99732 161 aa12.75□□□□□ -0.37
TRAPPC12-220ENST00000482645 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-220ENST00000482645 TIMM17BO60830 172 aa12.74□□□□□ -0.37
TRAPPC12-220ENST00000482645 COX17Q14061 63 aa12.74□□□□□ -0.37
TRAPPC12-220ENST00000482645 DPH3Q96FX2 82 aa12.74□□□□□ -0.37
TRAPPC12-220ENST00000482645 PKIGQ9Y2B9 76 aa12.74□□□□□ -0.37
TRAPPC12-220ENST00000482645 NDUFC2-KCTD14E9PQ53 114 aa12.73□□□□□ -0.37
TRAPPC12-220ENST00000482645 PANO1I0J062 215 aa12.73□□□□□ -0.37
TRAPPC12-220ENST00000482645 HNRNPA3P51991 378 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-220ENST00000482645 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
TRAPPC12-220ENST00000482645 Q6ZSA8 131 aa12.72□□□□□ -0.37
TRAPPC12-220ENST00000482645 MIR7-3HGQ8N6C7 128 aa12.72□□□□□ -0.37
TRAPPC12-220ENST00000482645 NPC2P61916 151 aa12.72□□□□□ -0.37
TRAPPC12-220ENST00000482645 GAGE2EQ4V326 116 aa12.72□□□□□ -0.37
TRAPPC12-220ENST00000482645 HIGD1BQ9P298 99 aa12.72□□□□□ -0.37
TRAPPC12-220ENST00000482645 GAGE2DQ9UEU5 116 aa12.72□□□□□ -0.37
TRAPPC12-220ENST00000482645 PCP4L1A6NKN8 68 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms