RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 DR1Q01658 176 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 H1FX-AS1Q4G0G2 97 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 Q8N8P6 123 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 TSLPQ969D9 159 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 LSM10Q969L4 123 aaKnown RBP-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 NDUFA4L2Q9NRX3 87 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 FHAD1B1AJZ9 1412 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 ANKRD50Q9ULJ7 1429 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 SLIT1O75093 1534 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 SMIM21Q3B7S5 101 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 DEFB123Q8N688 67 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 MAFIPQ8WZ33 124 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 PDCD10Q9BUL8 212 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 CCDC167Q9P0B6 97 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 APLNQ9ULZ1 77 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 LINC01558Q9Y6Z2 57 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 SPEGQ15772 3267 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 KNDC1Q76NI1 1749 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 PXDNQ92626 1479 aa-0.93□□□□□ -2.56
KDM1A-204ENST00000481879 ADAMTS12P58397 1594 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 NSD3Q9BZ95 1437 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 PIGBOS1A0A0B4J2F0 54 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 APOC3P02656 99 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 DEFB110Q30KQ9 67 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 S4R3F8 94 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 CFAP54Q96N23 3096 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 PTPN23Q9H3S7 1636 aa-0.94□□□□□ -2.56
KDM1A-204ENST00000481879 TRBV7-3A0A075B6L6 115 aa-0.95□□□□□ -2.56
KDM1A-204ENST00000481879 SYS1-DBNDD2H3BUS1 97 aa-0.95□□□□□ -2.56
KDM1A-204ENST00000481879 IFNGP01579 166 aa-0.95□□□□□ -2.56
KDM1A-204ENST00000481879 TPPP2P59282 170 aa-0.95□□□□□ -2.56
KDM1A-204ENST00000481879 DYNLRB1Q9NP97 96 aa-0.95□□□□□ -2.56
KDM1A-204ENST00000481879 MYH8P13535 1937 aa-0.95□□□□□ -2.56
KDM1A-204ENST00000481879 PPIP5K1Q6PFW1 1433 aa-0.96□□□□□ -2.56
KDM1A-204ENST00000481879 GAPVD1Q14C86 1478 aa-0.96□□□□□ -2.56
KDM1A-204ENST00000481879 CRYBG3Q68DQ2 2970 aa-0.96□□□□□ -2.56
KDM1A-204ENST00000481879 MGST2Q99735 147 aa-0.96□□□□□ -2.56
KDM1A-204ENST00000481879 MGAQ8IWI9 3026 aa-0.96□□□□□ -2.56
KDM1A-204ENST00000481879 VPS13CQ709C8 3753 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 FMN2Q9NZ56 1722 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 PAPPA2Q9BXP8 1791 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 CPSF4LA6NMK7 179 aaKnown RBP-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 HMGN4O00479 90 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 SSSCA1O60232 199 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 COX8AP10176 69 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 ARPC4P59998 168 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 SERP1Q9Y6X1 66 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 SBF2Q86WG5 1849 aa-0.97□□□□□ -2.56
KDM1A-204ENST00000481879 CDK5RAP2Q96SN8 1893 aa-0.97□□□□□ -2.57
KDM1A-204ENST00000481879 POLA1P09884 1462 aaPredicted RBP-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 CDC42BPGQ6DT37 1551 aa-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 SFT2D2O95562 160 aa-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 C12orf73Q69YU5 71 aa-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 COPS9Q8WXC6 57 aa-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 NAA60Q9H7X0 242 aa-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 LRRC37A2A6NM11 1700 aa-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 COL14A1Q05707 1796 aaKnown RBP-0.98□□□□□ -2.57
KDM1A-204ENST00000481879 MAGI1Q96QZ7 1491 aaPredicted RBP-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 HMGXB3Q12766 1538 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 MYH13Q9UKX3 1938 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 KIAA0556O60303 1618 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 A0A087WVE0 104 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 UBE2D3P61077 147 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 UBE2D2P62837 147 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 MRPL54Q6P161 138 aaKnown RBP-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 KRTAP8-1Q8IUC2 63 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 TMEM263Q8WUH6 116 aaKnown RBP-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 PFDN5Q99471 154 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 RERGLQ9H628 205 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 PATJQ8NI35 1801 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 ZNF236Q9UL36 1845 aa-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 SMG6Q86US8 1419 aaKnown RBP-0.99□□□□□ -2.57
KDM1A-204ENST00000481879 CEP350Q5VT06 3117 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 LOC105371267A0A1B0GV96 52 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 MT1FP04733 61 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 ASIPP42127 132 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 MEIG1Q5JSS6 88 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 CLPSL2Q6UWE3 100 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 USMG5Q96IX5 58 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 SPANXDQ9BXN6 97 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 MYH7P12883 1935 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 SHANK2Q9UPX8 1470 aa-1□□□□□ -2.57
KDM1A-204ENST00000481879 TRBV7-4A0A0J9YYF1 115 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 LINC00959A0A1B0GUT2 108 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 IGLC1P0CG04 106 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 C10orf113Q5VZT2 155 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 WFDC9Q8NEX5 89 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 PPP3R2Q96LZ3 170 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 SNRNP25Q9BV90 132 aaKnown RBP-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 LINC00474Q9P2X8 69 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 BCORQ6W2J9 1755 aa-1.01□□□□□ -2.57
KDM1A-204ENST00000481879 EP400Q96L91 3159 aa-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 LOC285095A0A1B0GVY8 99 aa-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 CHKB-CPT1BH3BT56 60 aa-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 DEFB4AO15263 64 aa-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 UBA52P62987 128 aaKnown RBP-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 MAP3K1Q13233 1512 aa-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 MYOM3Q5VTT5 1437 aa-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 WDFY4Q6ZS81 3184 aa-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 FDCSPQ8NFU4 85 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms