RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 CD3DP04234 171 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 OR5AL1P0C617 328 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 TAS2R30P59541 319 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 NCS1P62166 190 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 UBE2L3P68036 154 aaKnown RBP0.85□□□□□ -2.27
USH2A-204ENST00000481786 FLI1Q01543 452 aaPredicted RBP0.85□□□□□ -2.27
USH2A-204ENST00000481786 SCGB2B2Q4G0G5 96 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 ORMDL2Q53FV1 153 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 UBE2NLQ5JXB2 153 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 SPANXN2Q5MJ10 180 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 RASL11AQ6T310 242 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 MIR17HGQ75NE6 70 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 C5orf38Q86SI9 138 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 FAM210AQ96ND0 272 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 AP1S3Q96PC3 154 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 HIGD2AQ9BW72 106 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 ZNF471Q9BX82 626 aaPredicted RBP0.85□□□□□ -2.27
USH2A-204ENST00000481786 TMEM126AQ9H061 195 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 XAGE1AQ9HD64 81 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 NIT2Q9NQR4 276 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 CDC42SE2Q9NRR3 84 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 RBM12B-AS1Q9P1G2 102 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 CHTOPQ9Y3Y2 248 aaKnown RBP0.85□□□□□ -2.27
USH2A-204ENST00000481786 ARL2-SNX15V9GYD0 113 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 IGHV3OR16-9A0A0B4J2B5 98 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 M0R378 163 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 SSSCA1O60232 199 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 SDC2P34741 201 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 TAS2R45P59539 299 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 GNG5P63218 68 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 BAXQ07812 192 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 KHDC3LQ587J8 217 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 GCSAMLQ5JQS6 135 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 SPANXN1Q5VSR9 72 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 SPINT4Q6UDR6 99 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 Q86TA4 180 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 MRPL52Q86TS9 123 aaKnown RBP0.84□□□□□ -2.27
USH2A-204ENST00000481786 SNX29P2Q8IUI4 249 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 C8orf59Q8N0T1 100 aaPredicted RBP0.84□□□□□ -2.27
USH2A-204ENST00000481786 LINC00469Q8N7U9 141 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 SPANXA2-OT1Q8N9U9 137 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 C5orf17Q8NAS9 161 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 Q8NDZ9 215 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 OR10AG1Q8NH19 301 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 MRAP2Q96G30 205 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 SCGB3A2Q96PL1 93 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 TIMM17AQ99595 171 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 PRRT1Q99946 306 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 NPCDR1Q9BY65 106 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 MRPS26Q9BYN8 205 aaKnown RBP0.84□□□□□ -2.27
USH2A-204ENST00000481786 FAM107BQ9H098 131 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 TXNL4BQ9NX01 149 aaKnown RBP0.84□□□□□ -2.27
USH2A-204ENST00000481786 GSKIPQ9P0R6 139 aa0.84□□□□□ -2.27
USH2A-204ENST00000481786 CSDC2Q9Y534 153 aaKnown RBP0.84□□□□□ -2.27
USH2A-204ENST00000481786 TMSB15BA0A087X1C1 80 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 TRAV13-1A0A0B4J241 112 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 A0A0G2JQZ4 141 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 UBE2L5PA0A1B0GUS4 154 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 FAM25EA8MYX2 175 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 DISC1C4P0D8 188 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 TMEM238C9JI98 176 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 HPGDSO60760 199 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 MGPP08493 103 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 CXCL1P09341 107 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 S100A11P31949 105 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 CRIP1P50238 77 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 FOXA3P55318 350 aaPredicted RBP0.83□□□□□ -2.28
USH2A-204ENST00000481786 SMAGPQ0VAQ4 97 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 TMEM128Q5BJH2 165 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 C2orf82Q6UX34 121 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 TMEM229BQ8NBD8 167 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 C1orf64Q8NEQ6 169 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 PYDC1Q8WXC3 89 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 IMUPQ9GZP8 106 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 KCNIP2Q9NS61 270 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 MTFP1Q9UDX5 166 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 TPRKBQ9Y3C4 175 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 CBY1Q9Y3M2 126 aa0.83□□□□□ -2.28
USH2A-204ENST00000481786 LOC107984156A0A0G2JMH3 177 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 SH2D1AO60880 128 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 APOA1P02647 267 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 HRES1P13985 223 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 CKS1BP61024 79 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 HBG1P69891 147 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 HBG2P69892 147 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 SSBP1Q04837 148 aaKnown RBP0.82□□□□□ -2.28
USH2A-204ENST00000481786 ATP6V1FQ16864 119 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 KRTAP19-8Q3LI54 63 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 RNASE13Q5GAN3 156 aaKnown RBP0.82□□□□□ -2.28
USH2A-204ENST00000481786 Q5XG85 94 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 AKAP14Q86UN6 197 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 ARL17AQ8IVW1 177 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 C8orf17Q9NRJ1 99 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 EPDR1Q9UM22 224 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 ZFP30Q9Y2G7 519 aa0.82□□□□□ -2.28
USH2A-204ENST00000481786 TGIF2-C20orf24A0A0A6YYL0 155 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 MUC21A0A140T8X8 626 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 C7orf77A4D0Y5 90 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 SDHAF1A6NFY7 115 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 C17orf112F2Z3M2 114 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms