RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PRO0461Q9UI25 63 aa6.81□□□□□ -1.32
GARNL3-216ENST00000481242 Q6ZTC4 211 aa6.81□□□□□ -1.32
GARNL3-216ENST00000481242 IGKV4-1P06312 121 aa6.81□□□□□ -1.32
GARNL3-216ENST00000481242 FLNBO75369 2602 aaKnown RBP6.81□□□□□ -1.32
GARNL3-216ENST00000481242 ZNF73O43830 326 aaPredicted RBP6.8□□□□□ -1.32
GARNL3-216ENST00000481242 CCKP06307 115 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 LINC00242Q5T6M2 205 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 SBSPONQ8IVN8 264 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 LINC01561Q8N1V8 128 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 URB1-AS1Q96HZ7 61 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 RAI1Q7Z5J4 1906 aaPredicted RBP6.8□□□□□ -1.32
GARNL3-216ENST00000481242 Q6ZQY7 126 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
GARNL3-216ENST00000481242 EML5Q05BV3 1969 aa6.79□□□□□ -1.32
GARNL3-216ENST00000481242 C2orf48Q96LS8 159 aa6.79□□□□□ -1.32
GARNL3-216ENST00000481242 ACANP16112 2415 aa6.79□□□□□ -1.32
GARNL3-216ENST00000481242 PLAC8L1A1L4L8 177 aa6.79□□□□□ -1.32
GARNL3-216ENST00000481242 PRM2P04554 102 aa6.78□□□□□ -1.32
GARNL3-216ENST00000481242 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
GARNL3-216ENST00000481242 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
GARNL3-216ENST00000481242 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
GARNL3-216ENST00000481242 F8P00451 2351 aa6.77□□□□□ -1.33
GARNL3-216ENST00000481242 ANKRD17O75179 2603 aaKnown RBP6.77□□□□□ -1.33
GARNL3-216ENST00000481242 TRBV10-3A0A0K0K1G6 114 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 FSHBP01225 129 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 EDN2P20800 178 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 CD164Q04900 197 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 SMIM1B2RUZ4 78 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 GAS8-AS1O95177 125 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 FHL3Q13643 280 aa6.76□□□□□ -1.33
GARNL3-216ENST00000481242 UNQ6190/PRO20217Q6UXQ8 127 aa6.75□□□□□ -1.33
GARNL3-216ENST00000481242 AMELXQ99217 191 aa6.75□□□□□ -1.33
GARNL3-216ENST00000481242 A8MZ25 164 aa6.75□□□□□ -1.33
GARNL3-216ENST00000481242 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
GARNL3-216ENST00000481242 LYPD5Q6UWN5 251 aa6.75□□□□□ -1.33
GARNL3-216ENST00000481242 SMIM11BQ8TCY0 68 aa6.75□□□□□ -1.33
GARNL3-216ENST00000481242 AGRNO00468 2067 aa6.74□□□□□ -1.33
GARNL3-216ENST00000481242 SLPIP03973 132 aa6.74□□□□□ -1.33
GARNL3-216ENST00000481242 POM121L12Q8N7R1 296 aa6.74□□□□□ -1.33
GARNL3-216ENST00000481242 ENHOQ6UWT2 76 aa6.74□□□□□ -1.33
GARNL3-216ENST00000481242 H3BNG1 76 aa6.73□□□□□ -1.33
GARNL3-216ENST00000481242 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
GARNL3-216ENST00000481242 SRCAPQ6ZRS2 3230 aa6.73□□□□□ -1.33
GARNL3-216ENST00000481242 RPL37AP8A6NKH3 93 aa6.73□□□□□ -1.33
GARNL3-216ENST00000481242 IGLV4-60A0A075B6I1 120 aa6.72□□□□□ -1.33
GARNL3-216ENST00000481242 C6orf223Q8N319 242 aa6.72□□□□□ -1.33
GARNL3-216ENST00000481242 A0A096LNJ9 63 aa6.72□□□□□ -1.33
GARNL3-216ENST00000481242 REG3GQ6UW15 175 aa6.72□□□□□ -1.33
GARNL3-216ENST00000481242 FAM19A3Q7Z5A8 133 aa6.72□□□□□ -1.33
GARNL3-216ENST00000481242 TRBV7-6A0A0J9YX20 115 aa6.71□□□□□ -1.34
GARNL3-216ENST00000481242 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
GARNL3-216ENST00000481242 SPINK6Q6UWN8 80 aa6.71□□□□□ -1.34
GARNL3-216ENST00000481242 PRYO14603 147 aa6.7□□□□□ -1.34
GARNL3-216ENST00000481242 LINC01556Q5JQF7 62 aa6.7□□□□□ -1.34
GARNL3-216ENST00000481242 ESRGQ1W209 222 aa6.7□□□□□ -1.34
GARNL3-216ENST00000481242 C3orf84H3BNL1 204 aa6.69□□□□□ -1.34
GARNL3-216ENST00000481242 NTM-AS1Q6ZSK4 140 aa6.69□□□□□ -1.34
GARNL3-216ENST00000481242 IGLV9-49A0A0B4J1Y8 123 aa6.69□□□□□ -1.34
GARNL3-216ENST00000481242 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
GARNL3-216ENST00000481242 C11orf72Q8NBR9 251 aa6.68□□□□□ -1.34
GARNL3-216ENST00000481242 COL4A2P08572 1712 aa6.68□□□□□ -1.34
GARNL3-216ENST00000481242 CXCL6P80162 114 aa6.68□□□□□ -1.34
GARNL3-216ENST00000481242 A6NED7 52 aa6.67□□□□□ -1.34
GARNL3-216ENST00000481242 LINC01546A6NGU7 62 aa6.67□□□□□ -1.34
GARNL3-216ENST00000481242 KRTAP24-1Q3LI83 254 aa6.67□□□□□ -1.34
GARNL3-216ENST00000481242 COX6A2Q02221 97 aa6.67□□□□□ -1.34
GARNL3-216ENST00000481242 K7ERS5 55 aa6.67□□□□□ -1.34
GARNL3-216ENST00000481242 KIF25-AS1Q9Y6Z4 181 aa6.67□□□□□ -1.34
GARNL3-216ENST00000481242 SNURFQ9Y675 71 aa6.66□□□□□ -1.34
GARNL3-216ENST00000481242 KLK9Q2XQG4 91 aa6.66□□□□□ -1.34
GARNL3-216ENST00000481242 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
GARNL3-216ENST00000481242 SCXQ7RTU7 201 aa6.66□□□□□ -1.34
GARNL3-216ENST00000481242 CENPFP49454 3210 aa6.66□□□□□ -1.34
GARNL3-216ENST00000481242 TET2Q6N021 2002 aaPredicted RBP6.66□□□□□ -1.34
GARNL3-216ENST00000481242 Q8N814 137 aa6.66□□□□□ -1.34
GARNL3-216ENST00000481242 Q8N9L7 120 aa6.65□□□□□ -1.34
GARNL3-216ENST00000481242 Q6ZSN1 163 aa6.65□□□□□ -1.35
GARNL3-216ENST00000481242 C9orf116Q5BN46 136 aaPredicted RBP6.64□□□□□ -1.35
GARNL3-216ENST00000481242 FAM19A4Q96LR4 140 aa6.64□□□□□ -1.35
GARNL3-216ENST00000481242 MDFIQ99750 246 aa6.64□□□□□ -1.35
GARNL3-216ENST00000481242 PRR15LQ9BU68 103 aa6.63□□□□□ -1.35
GARNL3-216ENST00000481242 WFDC13Q8IUB5 93 aa6.63□□□□□ -1.35
GARNL3-216ENST00000481242 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
GARNL3-216ENST00000481242 TSPEAR-AS2P59090 65 aa6.62□□□□□ -1.35
GARNL3-216ENST00000481242 Q6ZRU5 148 aa6.61□□□□□ -1.35
GARNL3-216ENST00000481242 IGHV3OR16-9A0A0B4J2B5 98 aa6.61□□□□□ -1.35
GARNL3-216ENST00000481242 SOSTDC1Q6X4U4 206 aa6.61□□□□□ -1.35
GARNL3-216ENST00000481242 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
GARNL3-216ENST00000481242 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
GARNL3-216ENST00000481242 Q9BRP9 147 aa6.61□□□□□ -1.35
GARNL3-216ENST00000481242 IGLV5-39A0A0G2JS06 123 aa6.61□□□□□ -1.35
GARNL3-216ENST00000481242 X6R8D5 127 aa6.6□□□□□ -1.35
GARNL3-216ENST00000481242 HECTD1Q9ULT8 2610 aa6.6□□□□□ -1.35
GARNL3-216ENST00000481242 MUC4Q99102 2169 aa6.6□□□□□ -1.35
GARNL3-216ENST00000481242 TMEM254Q8TBM7 123 aa6.59□□□□□ -1.35
GARNL3-216ENST00000481242 WWC2-AS2Q96NR7 200 aa6.59□□□□□ -1.35
GARNL3-216ENST00000481242 PTPRBP23467 1997 aa6.59□□□□□ -1.36
GARNL3-216ENST00000481242 LINC00315P59091 139 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms