RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 IGKV2-29A2NJV5 120 aaPredicted RBP5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 H3BUT2 72 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 I3L3M4 83 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 TNFRSF6BO95407 300 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 NPYP01303 97 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 PRSS1P07477 247 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 ORMDL2Q53FV1 153 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 Q6ZVH6 145 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 CHAC1Q9BUX1 264 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 VCX2Q9H322 139 aa5.93□□□□□ -1.46
SRGAP3-206ENST00000480750 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 TMEM238LA0A1B0GVL6 79 aa5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 A6NJY4 79 aa5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 H7C423 109 aa5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 NMUP48645 174 aa5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 RPL32P62910 135 aaKnown RBP5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 PAPPA-AS1Q5QFB9 102 aa5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 RNF185Q96GF1 192 aa5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 C20orf78Q9BR46 151 aa5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 CHTOPQ9Y3Y2 248 aaKnown RBP5.92□□□□□ -1.46
SRGAP3-206ENST00000480750 TRBV6-5A0A0K0K1A5 114 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 LOC389332A0A1B0GUA5 103 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 A0A1B0GWB2 263 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 GAGE12HA6NDE8 117 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 SMKR1H3BMG3 65 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 CFAP161Q6P656 301 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 KRTAP26-1Q6PEX3 210 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 CEND1Q8N111 149 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
SRGAP3-206ENST00000480750 E9PLD3 99 aa5.9□□□□□ -1.46
SRGAP3-206ENST00000480750 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.9□□□□□ -1.46
SRGAP3-206ENST00000480750 MTURNQ8N3F0 131 aa5.9□□□□□ -1.46
SRGAP3-206ENST00000480750 C9orf163Q8N9P6 203 aa5.9□□□□□ -1.46
SRGAP3-206ENST00000480750 DPH3Q96FX2 82 aa5.9□□□□□ -1.46
SRGAP3-206ENST00000480750 HERC1Q15751 4861 aa5.9□□□□□ -1.47
SRGAP3-206ENST00000480750 IGHV3-64A0A075B6Q5 118 aa5.89□□□□□ -1.47
SRGAP3-206ENST00000480750 F8VRH5 84 aa5.89□□□□□ -1.47
SRGAP3-206ENST00000480750 SMAGPQ0VAQ4 97 aa5.89□□□□□ -1.47
SRGAP3-206ENST00000480750 CHCHD10Q8WYQ3 142 aaPredicted RBP5.89□□□□□ -1.47
SRGAP3-206ENST00000480750 TMEM238C9JI98 176 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 VCYO14598 125 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 TSHBP01222 138 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 XCL1P47992 114 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 CNBPP62633 177 aaKnown RBP5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 SS18Q15532 418 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 HIGD2BQ4VC39 106 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 ZC2HC1BQ5TFG8 222 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 PCP2Q8IVA1 136 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 KIR2DL4Q99706 377 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 SMIM2Q9BVW6 85 aa5.88□□□□□ -1.47
SRGAP3-206ENST00000480750 TRBV27A0A0K0K1C4 114 aa5.87□□□□□ -1.47
SRGAP3-206ENST00000480750 POLR2KP53803 58 aaKnown RBP5.87□□□□□ -1.47
SRGAP3-206ENST00000480750 RPL37AP61513 92 aaKnown RBP5.87□□□□□ -1.47
SRGAP3-206ENST00000480750 SUMO2P61956 95 aaKnown RBP5.87□□□□□ -1.47
SRGAP3-206ENST00000480750 NRACQ8N912 160 aa5.87□□□□□ -1.47
SRGAP3-206ENST00000480750 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
SRGAP3-206ENST00000480750 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
SRGAP3-206ENST00000480750 MYMXA0A1B0GTQ4 84 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 LINC00959A0A1B0GUT2 108 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 PANO1I0J062 215 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 SLPIP03973 132 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 FXYD2P54710 66 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 HERVK_113P61574 105 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 SDIM1Q6ZPB5 146 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 C15orf56Q8N910 161 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 TP73-AS1Q9UF72 201 aa5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
SRGAP3-206ENST00000480750 TRBV20-1A0A075B6N2 111 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 A0A1B0GV72 72 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 M0QXV9 152 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 TMEM141Q96I45 108 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 HIST1H4GQ99525 98 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 CDC42SE2Q9NRR3 84 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 NHP2Q9NX24 153 aaKnown RBP5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 MRPL35Q9NZE8 188 aaKnown RBP5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
SRGAP3-206ENST00000480750 IGHV1-58A0A0C4DH39 117 aa5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 H3BMG7 143 aa5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 MALP21145 153 aa5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 FOXI1Q12951 378 aa5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 RNASE13Q5GAN3 156 aaKnown RBP5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 LINC00526Q96FQ7 95 aa5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 SPANXB1Q9NS25 103 aaPredicted RBP5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 PKIGQ9Y2B9 76 aa5.84□□□□□ -1.47
SRGAP3-206ENST00000480750 GVQW2A0A096LPI5 108 aaPredicted RBP5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 IGKV2-24A0A0C4DH68 120 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 ZNF561-AS1K7EIQ3 104 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 CHTF8P0CG12 524 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 COX6A2Q02221 97 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 CD164L2Q6UWJ8 174 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 SCGB3A1Q96QR1 104 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 TIMM17AQ99595 171 aa5.83□□□□□ -1.48
SRGAP3-206ENST00000480750 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
SRGAP3-206ENST00000480750 A0A087WYN8 130 aa5.82□□□□□ -1.48
SRGAP3-206ENST00000480750 TRAV13-1A0A0B4J241 112 aa5.82□□□□□ -1.48
SRGAP3-206ENST00000480750 CYSLTR1Q9Y271 337 aa5.82□□□□□ -1.48
SRGAP3-206ENST00000480750 UBE2D4Q9Y2X8 147 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms