RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 IGLV1-40P01703 118 aa6.98□□□□□ -1.29
VEGFA-212ENST00000480614 LINC00482Q8N8I6 264 aa6.98□□□□□ -1.29
VEGFA-212ENST00000480614 WFDC10AQ9H1F0 79 aa6.98□□□□□ -1.29
VEGFA-212ENST00000480614 LY6G6DO95868 133 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 ZNF843Q8N446 348 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 ZNF295-AS1Q8N0V1 137 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 LOC100131303A0A0U1RQF7 123 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 C1orf137Q5JT78 98 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 LY6G6CO95867 125 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 LINC00694P0DN24 101 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 CHD6Q8TD26 2715 aa6.97□□□□□ -1.29
VEGFA-212ENST00000480614 CSDC2Q9Y534 153 aaKnown RBP6.96□□□□□ -1.29
VEGFA-212ENST00000480614 C19orf84I3L1E1 186 aa6.96□□□□□ -1.29
VEGFA-212ENST00000480614 CYSRT1A8MQ03 144 aa6.96□□□□□ -1.3
VEGFA-212ENST00000480614 ESRGQ1W209 222 aa6.96□□□□□ -1.3
VEGFA-212ENST00000480614 LINC01561Q8N1V8 128 aa6.96□□□□□ -1.3
VEGFA-212ENST00000480614 FAM30AQ9NZY2 134 aa6.96□□□□□ -1.3
VEGFA-212ENST00000480614 IGLV2-18A0A075B6J9 118 aa6.95□□□□□ -1.3
VEGFA-212ENST00000480614 IGLV5-52A0A0A0MRZ9 124 aa6.94□□□□□ -1.3
VEGFA-212ENST00000480614 TRBV7-6A0A0J9YX20 115 aa6.94□□□□□ -1.3
VEGFA-212ENST00000480614 PROK1P58294 105 aa6.94□□□□□ -1.3
VEGFA-212ENST00000480614 LINC01006Q8NI28 216 aa6.94□□□□□ -1.3
VEGFA-212ENST00000480614 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 UNC79Q9P2D8 2635 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 C22orf34Q6ZV56 151 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 FSHBP01225 129 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 PRR4Q16378 134 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 M0R2N4 97 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 NANOS2P60321 138 aaKnown RBP6.93□□□□□ -1.3
VEGFA-212ENST00000480614 PRR9Q5T870 116 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 TEX15Q9BXT5 2789 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 IGIPA6NJ69 53 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 LIMD2Q9BT23 127 aa6.93□□□□□ -1.3
VEGFA-212ENST00000480614 PMAIP1Q13794 54 aa6.92□□□□□ -1.3
VEGFA-212ENST00000480614 IGHV4-30-4P0DP06 118 aa6.92□□□□□ -1.3
VEGFA-212ENST00000480614 CIRBP-AS1Q8TBR5 109 aa6.92□□□□□ -1.3
VEGFA-212ENST00000480614 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
VEGFA-212ENST00000480614 PRO0628Q9UI54 55 aa6.92□□□□□ -1.3
VEGFA-212ENST00000480614 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
VEGFA-212ENST00000480614 Q6ZPA2 131 aa6.91□□□□□ -1.3
VEGFA-212ENST00000480614 C1orf229Q6ZS94 237 aaPredicted RBP6.91□□□□□ -1.3
VEGFA-212ENST00000480614 BRI3O95415 125 aa6.91□□□□□ -1.3
VEGFA-212ENST00000480614 ZNF580Q9UK33 172 aa6.91□□□□□ -1.3
VEGFA-212ENST00000480614 A0A1B0GUV1 79 aa6.9□□□□□ -1.3
VEGFA-212ENST00000480614 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
VEGFA-212ENST00000480614 CELA1Q9UNI1 258 aa6.9□□□□□ -1.3
VEGFA-212ENST00000480614 CRIP3Q6Q6R5 217 aa6.9□□□□□ -1.3
VEGFA-212ENST00000480614 TEP1Q99973 2627 aaKnown RBP6.9□□□□□ -1.3
VEGFA-212ENST00000480614 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.31
VEGFA-212ENST00000480614 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.31
VEGFA-212ENST00000480614 Q9BRP9 147 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 IGHV6-1A0A0B4J1U7 121 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 C10orf99Q6UWK7 81 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 Q6ZS46 218 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 Q8N2B8 174 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 LINC00208Q96KT6 92 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 LINC00310P59036 64 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 A8MZ25 164 aa6.89□□□□□ -1.31
VEGFA-212ENST00000480614 UNQ6190/PRO20217Q6UXQ8 127 aa6.88□□□□□ -1.31
VEGFA-212ENST00000480614 STAB2Q8WWQ8 2551 aa6.88□□□□□ -1.31
VEGFA-212ENST00000480614 CRIP2P52943 208 aaPredicted RBP6.88□□□□□ -1.31
VEGFA-212ENST00000480614 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 H0Y9P7 68 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 hDV103S1A0JD37 113 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 HCG22E2RYF7 251 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 PLA2G2AP14555 144 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 CXCL6P80162 114 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 BEAN1Q3B7T3 259 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 IGLV1-51P01701 117 aa6.87□□□□□ -1.31
VEGFA-212ENST00000480614 TP53AIP1Q9HCN2 124 aa6.86□□□□□ -1.31
VEGFA-212ENST00000480614 LINC01547P58512 204 aaPredicted RBP6.86□□□□□ -1.31
VEGFA-212ENST00000480614 LINC01556Q5JQF7 62 aa6.86□□□□□ -1.31
VEGFA-212ENST00000480614 AMELXQ99217 191 aa6.86□□□□□ -1.31
VEGFA-212ENST00000480614 Q8N3U1 123 aa6.85□□□□□ -1.31
VEGFA-212ENST00000480614 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
VEGFA-212ENST00000480614 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
VEGFA-212ENST00000480614 CENPFP49454 3210 aa6.84□□□□□ -1.31
VEGFA-212ENST00000480614 COX8CQ7Z4L0 72 aa6.84□□□□□ -1.31
VEGFA-212ENST00000480614 WISP2O76076 250 aa6.84□□□□□ -1.31
VEGFA-212ENST00000480614 C16orf95Q9H693 158 aa6.84□□□□□ -1.31
VEGFA-212ENST00000480614 X6R8D5 127 aa6.84□□□□□ -1.32
VEGFA-212ENST00000480614 A0A1B0GW54 56 aa6.83□□□□□ -1.32
VEGFA-212ENST00000480614 C18orf65Q6ZTR6 163 aa6.83□□□□□ -1.32
VEGFA-212ENST00000480614 C6orf223Q8N319 242 aa6.83□□□□□ -1.32
VEGFA-212ENST00000480614 A0A087WYN8 130 aa6.82□□□□□ -1.32
VEGFA-212ENST00000480614 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
VEGFA-212ENST00000480614 C1orf134Q5TEV5 83 aa6.82□□□□□ -1.32
VEGFA-212ENST00000480614 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
VEGFA-212ENST00000480614 FHL2Q14192 279 aa6.81□□□□□ -1.32
VEGFA-212ENST00000480614 BCE1O60756 84 aa6.81□□□□□ -1.32
VEGFA-212ENST00000480614 RETNQ9HD89 108 aa6.81□□□□□ -1.32
VEGFA-212ENST00000480614 LINC00337Q8N6G1 96 aa6.8□□□□□ -1.32
VEGFA-212ENST00000480614 GCN1Q92616 2671 aaKnown RBP6.8□□□□□ -1.32
VEGFA-212ENST00000480614 LINC00575Q6W349 94 aa6.8□□□□□ -1.32
VEGFA-212ENST00000480614 CRYGAP11844 174 aa6.8□□□□□ -1.32
VEGFA-212ENST00000480614 OXLD1Q5BKU9 147 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms