RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 PROK1P58294 105 aa4.4□□□□□ -1.7
PRPF4B-205ENST00000480058 WFDC11Q8NEX6 87 aa4.4□□□□□ -1.7
PRPF4B-205ENST00000480058 LINC00208Q96KT6 92 aa4.4□□□□□ -1.7
PRPF4B-205ENST00000480058 SMCPP49901 116 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-205ENST00000480058 C3orf84H3BNL1 204 aa4.4□□□□□ -1.71
PRPF4B-205ENST00000480058 A0A087WVE0 104 aa4.4□□□□□ -1.71
PRPF4B-205ENST00000480058 UNQ6190/PRO20217Q6UXQ8 127 aa4.4□□□□□ -1.71
PRPF4B-205ENST00000480058 WFDC13Q8IUB5 93 aa4.4□□□□□ -1.71
PRPF4B-205ENST00000480058 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.71
PRPF4B-205ENST00000480058 IGKV2-24A0A0C4DH68 120 aa4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 A0A0U1RQV1 116 aa4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 LINC01547P58512 204 aaPredicted RBP4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 LINC00337Q8N6G1 96 aa4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 WFDC10AQ9H1F0 79 aa4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 ARHGAP32A7KAX9 2087 aa4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 FAM19A4Q96LR4 140 aa4.39□□□□□ -1.71
PRPF4B-205ENST00000480058 LOC110117498A0A087WWA1 95 aa4.38□□□□□ -1.71
PRPF4B-205ENST00000480058 TANC2Q9HCD6 1990 aa4.38□□□□□ -1.71
PRPF4B-205ENST00000480058 MUC4Q99102 2169 aa4.38□□□□□ -1.71
PRPF4B-205ENST00000480058 MGAMO43451 1857 aa4.38□□□□□ -1.71
PRPF4B-205ENST00000480058 FHL2Q14192 279 aa4.38□□□□□ -1.71
PRPF4B-205ENST00000480058 HCFC1P51610 2035 aa4.38□□□□□ -1.71
PRPF4B-205ENST00000480058 WFDC10BQ8IUB3 73 aa4.37□□□□□ -1.71
PRPF4B-205ENST00000480058 LINC01600Q96MT4 127 aa4.37□□□□□ -1.71
PRPF4B-205ENST00000480058 FLNBO75369 2602 aaKnown RBP4.37□□□□□ -1.71
PRPF4B-205ENST00000480058 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
PRPF4B-205ENST00000480058 H3BNG1 76 aa4.37□□□□□ -1.71
PRPF4B-205ENST00000480058 IGHV4-30-4P0DP06 118 aa4.37□□□□□ -1.71
PRPF4B-205ENST00000480058 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
PRPF4B-205ENST00000480058 C16orf95Q9H693 158 aa4.36□□□□□ -1.71
PRPF4B-205ENST00000480058 C10orf25Q5T742 122 aa4.36□□□□□ -1.71
PRPF4B-205ENST00000480058 A0A087WYN8 130 aa4.36□□□□□ -1.71
PRPF4B-205ENST00000480058 DEFB4AO15263 64 aa4.36□□□□□ -1.71
PRPF4B-205ENST00000480058 TMEM131Q92545 1883 aa4.36□□□□□ -1.71
PRPF4B-205ENST00000480058 C11orf72Q8NBR9 251 aa4.36□□□□□ -1.71
PRPF4B-205ENST00000480058 LTBP2Q14767 1821 aa4.35□□□□□ -1.71
PRPF4B-205ENST00000480058 C19orf84I3L1E1 186 aa4.35□□□□□ -1.71
PRPF4B-205ENST00000480058 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
PRPF4B-205ENST00000480058 PCDH15Q96QU1 1955 aa4.35□□□□□ -1.71
PRPF4B-205ENST00000480058 IGKV2-28A0A075B6P5 120 aa4.35□□□□□ -1.71
PRPF4B-205ENST00000480058 IGKV2D-28P01615 120 aa4.35□□□□□ -1.71
PRPF4B-205ENST00000480058 NHLRC4P0CG21 123 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-205ENST00000480058 TNRC6BQ9UPQ9 1833 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-205ENST00000480058 Q8NBF4 154 aa4.34□□□□□ -1.71
PRPF4B-205ENST00000480058 A8MTW9 85 aa4.34□□□□□ -1.71
PRPF4B-205ENST00000480058 GVQW2A0A096LPI5 108 aaPredicted RBP4.34□□□□□ -1.72
PRPF4B-205ENST00000480058 KLKP1Q107X0 134 aa4.34□□□□□ -1.72
PRPF4B-205ENST00000480058 CYP4F30PQ9H0H9 118 aa4.34□□□□□ -1.72
PRPF4B-205ENST00000480058 C10orf99Q6UWK7 81 aa4.34□□□□□ -1.72
PRPF4B-205ENST00000480058 PRB2P02812 416 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-205ENST00000480058 PRB1P04280 392 aa4.33□□□□□ -1.72
PRPF4B-205ENST00000480058 COX6A2Q02221 97 aa4.33□□□□□ -1.72
PRPF4B-205ENST00000480058 REG3GQ6UW15 175 aa4.33□□□□□ -1.72
PRPF4B-205ENST00000480058 PLAC8L1A1L4L8 177 aa4.33□□□□□ -1.72
PRPF4B-205ENST00000480058 ELOF1P60002 83 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-205ENST00000480058 MAST4O15021 2626 aa4.33□□□□□ -1.72
PRPF4B-205ENST00000480058 A0A087WSZ3 146 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 LOC100131303A0A0U1RQF7 123 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 VPREB1P12018 145 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 SPATA3Q8NHX4 192 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 SOSTDC1Q6X4U4 206 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 A0A096LNI7 61 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 AVPP01185 164 aa4.32□□□□□ -1.72
PRPF4B-205ENST00000480058 PRR4Q16378 134 aa4.31□□□□□ -1.72
PRPF4B-205ENST00000480058 H0Y9P7 68 aa4.31□□□□□ -1.72
PRPF4B-205ENST00000480058 LINC01556Q5JQF7 62 aa4.31□□□□□ -1.72
PRPF4B-205ENST00000480058 MUC22E2RYF6 1773 aaPredicted RBP4.31□□□□□ -1.72
PRPF4B-205ENST00000480058 FHL3Q13643 280 aa4.3□□□□□ -1.72
PRPF4B-205ENST00000480058 Q6ZQT0 140 aa4.3□□□□□ -1.72
PRPF4B-205ENST00000480058 LINC00482Q8N8I6 264 aa4.3□□□□□ -1.72
PRPF4B-205ENST00000480058 ZNF843Q8N446 348 aa4.3□□□□□ -1.72
PRPF4B-205ENST00000480058 LITAFQ99732 161 aa4.3□□□□□ -1.72
PRPF4B-205ENST00000480058 ATRQ13535 2644 aa4.3□□□□□ -1.72
PRPF4B-205ENST00000480058 LY6G6DO95868 133 aa4.29□□□□□ -1.72
PRPF4B-205ENST00000480058 USP24Q9UPU5 2620 aa4.29□□□□□ -1.72
PRPF4B-205ENST00000480058 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
PRPF4B-205ENST00000480058 C1orf64Q8NEQ6 169 aa4.29□□□□□ -1.72
PRPF4B-205ENST00000480058 Q9BRP9 147 aa4.29□□□□□ -1.72
PRPF4B-205ENST00000480058 LYPD5Q6UWN5 251 aa4.28□□□□□ -1.72
PRPF4B-205ENST00000480058 KIAA1549Q9HCM3 1950 aa4.28□□□□□ -1.72
PRPF4B-205ENST00000480058 ZFHX3Q15911 3703 aa4.28□□□□□ -1.72
PRPF4B-205ENST00000480058 ATG2AQ2TAZ0 1938 aa4.28□□□□□ -1.72
PRPF4B-205ENST00000480058 Q6ZSN1 163 aa4.28□□□□□ -1.72
PRPF4B-205ENST00000480058 TRAV22A0A0B4J277 110 aa4.27□□□□□ -1.73
PRPF4B-205ENST00000480058 NUPR2A6NF83 97 aa4.27□□□□□ -1.73
PRPF4B-205ENST00000480058 MOBPQ13875 183 aa4.27□□□□□ -1.73
PRPF4B-205ENST00000480058 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
PRPF4B-205ENST00000480058 C9orf116Q5BN46 136 aaPredicted RBP4.27□□□□□ -1.73
PRPF4B-205ENST00000480058 LOC101927531A0A1B0GV80 90 aa4.26□□□□□ -1.73
PRPF4B-205ENST00000480058 A0A1W2PPR1 153 aa4.26□□□□□ -1.73
PRPF4B-205ENST00000480058 ACYP2P14621 99 aa4.26□□□□□ -1.73
PRPF4B-205ENST00000480058 Q6ZRU5 148 aa4.26□□□□□ -1.73
PRPF4B-205ENST00000480058 RPL37AP61513 92 aaKnown RBP4.26□□□□□ -1.73
PRPF4B-205ENST00000480058 PRR3P79522 188 aaKnown RBP4.26□□□□□ -1.73
PRPF4B-205ENST00000480058 PSPHP1O15172 72 aa4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 Q6ZRX8 168 aa4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 NUP210LQ5VU65 1888 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms