RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 PRSS47A8MTI9 375 aa5.73□□□□□ -1.49
CMTM1-208ENST00000479381 OXTP01178 125 aa5.73□□□□□ -1.49
CMTM1-208ENST00000479381 NDUFA6P56556 154 aa5.73□□□□□ -1.49
CMTM1-208ENST00000479381 RAB5BP61020 215 aa5.73□□□□□ -1.49
CMTM1-208ENST00000479381 SEC11AP67812 179 aa5.73□□□□□ -1.49
CMTM1-208ENST00000479381 A0A087WZ39 114 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 IGHV3OR16-9A0A0B4J2B5 98 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 F8WDY8 70 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.72□□□□□ -1.49
CMTM1-208ENST00000479381 TRGC2P03986 189 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 UBE2D1P51668 147 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 HNRNPA3P51991 378 aaKnown RBP5.72□□□□□ -1.49
CMTM1-208ENST00000479381 HERVK_113P63121 156 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 C9orf116Q5BN46 136 aaPredicted RBP5.72□□□□□ -1.49
CMTM1-208ENST00000479381 C6orf226Q5I0X4 101 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 LINC00242Q5T6M2 205 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 FAM19A5Q7Z5A7 132 aaPredicted RBP5.72□□□□□ -1.49
CMTM1-208ENST00000479381 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
CMTM1-208ENST00000479381 MRPL35Q9NZE8 188 aaKnown RBP5.72□□□□□ -1.49
CMTM1-208ENST00000479381 UBE2BP63146 152 aa5.71□□□□□ -1.5
CMTM1-208ENST00000479381 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
CMTM1-208ENST00000479381 Q6ZRP5 223 aa5.71□□□□□ -1.5
CMTM1-208ENST00000479381 TIMM17AQ99595 171 aa5.71□□□□□ -1.5
CMTM1-208ENST00000479381 ALKBH7Q9BT30 221 aaPredicted RBP5.71□□□□□ -1.5
CMTM1-208ENST00000479381 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
CMTM1-208ENST00000479381 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
CMTM1-208ENST00000479381 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
CMTM1-208ENST00000479381 RNF151Q2KHN1 245 aa5.7□□□□□ -1.5
CMTM1-208ENST00000479381 C2orf82Q6UX34 121 aa5.7□□□□□ -1.5
CMTM1-208ENST00000479381 PHF5AQ7RTV0 110 aaKnown RBP5.7□□□□□ -1.5
CMTM1-208ENST00000479381 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
CMTM1-208ENST00000479381 C6orf48Q9UBA6 75 aa5.7□□□□□ -1.5
CMTM1-208ENST00000479381 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
CMTM1-208ENST00000479381 TRBV30A0A0K0K1B3 111 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 NPSP0C0P6 89 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 C1orf137Q5JT78 98 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 C10orf25Q5T742 122 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 REG3GQ6UW15 175 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 ERASQ7Z444 233 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 FAM104AQ969W3 186 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 AMELXQ99217 191 aa5.69□□□□□ -1.5
CMTM1-208ENST00000479381 A0A1W2PNN7 141 aa5.68□□□□□ -1.5
CMTM1-208ENST00000479381 IGIPA6NJ69 53 aa5.68□□□□□ -1.5
CMTM1-208ENST00000479381 S100A6P06703 90 aa5.68□□□□□ -1.5
CMTM1-208ENST00000479381 LINC00173Q6ZV60 143 aa5.68□□□□□ -1.5
CMTM1-208ENST00000479381 LINC01561Q8N1V8 128 aa5.68□□□□□ -1.5
CMTM1-208ENST00000479381 H3BRM9 83 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 M0QXV9 152 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BKO60814 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BJP06899 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BOP23527 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BBP33778 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BDP58876 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BCP62807 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST2H2BEQ16778 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.67□□□□□ -1.5
CMTM1-208ENST00000479381 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 Q8IZM0 81 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BHQ93079 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BNQ99877 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 HIST1H2BMQ99879 126 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 CDKN2A-AS1Q9UH64 79 aa5.67□□□□□ -1.5
CMTM1-208ENST00000479381 FAM168BA1KXE4 195 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 NDUFC2-KCTD14E9PQ53 114 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 HBDP02042 147 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 SPINK8P0C7L1 97 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 CXCL5P42830 114 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 PMVKQ15126 192 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 SPINK6Q6UWN8 80 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 COX7B2Q8TF08 81 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
CMTM1-208ENST00000479381 TINCRA0A1B0GVN0 87 aa5.65□□□□□ -1.5
CMTM1-208ENST00000479381 LINC00614P0C842 121 aa5.65□□□□□ -1.5
CMTM1-208ENST00000479381 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.5
CMTM1-208ENST00000479381 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
CMTM1-208ENST00000479381 PMCHL1Q16048 86 aa5.65□□□□□ -1.5
CMTM1-208ENST00000479381 BAGE3Q86Y29 109 aa5.65□□□□□ -1.5
CMTM1-208ENST00000479381 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.5
CMTM1-208ENST00000479381 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
CMTM1-208ENST00000479381 F8VRH5 84 aa5.64□□□□□ -1.51
CMTM1-208ENST00000479381 ATP5LO75964 103 aa5.64□□□□□ -1.51
CMTM1-208ENST00000479381 C18orf32Q8TCD1 76 aa5.64□□□□□ -1.51
CMTM1-208ENST00000479381 CST9LQ9H4G1 147 aa5.64□□□□□ -1.51
CMTM1-208ENST00000479381 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
CMTM1-208ENST00000479381 PDZD11Q5EBL8 140 aa5.63□□□□□ -1.51
CMTM1-208ENST00000479381 COA6Q5JTJ3 125 aaKnown RBP5.63□□□□□ -1.51
CMTM1-208ENST00000479381 TMEM170BQ5T4T1 132 aa5.63□□□□□ -1.51
CMTM1-208ENST00000479381 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
CMTM1-208ENST00000479381 HERC1Q15751 4861 aa5.63□□□□□ -1.51
CMTM1-208ENST00000479381 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
CMTM1-208ENST00000479381 SMIM1B2RUZ4 78 aa5.62□□□□□ -1.51
CMTM1-208ENST00000479381 LBHQ53QV2 105 aaPredicted RBP5.62□□□□□ -1.51
CMTM1-208ENST00000479381 FAM19A3Q7Z5A8 133 aa5.62□□□□□ -1.51
CMTM1-208ENST00000479381 CHCHD1Q96BP2 118 aaKnown RBP5.62□□□□□ -1.51
CMTM1-208ENST00000479381 C5orf52A6NGY3 159 aa5.61□□□□□ -1.51
CMTM1-208ENST00000479381 H0Y8G0 127 aa5.61□□□□□ -1.51
CMTM1-208ENST00000479381 HSBP1O75506 76 aa5.61□□□□□ -1.51
CMTM1-208ENST00000479381 S100A2P29034 98 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms