RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 A0A087WZ39 114 aa12.91□□□□□ -0.34
TRIM8-203ENST00000479004 LINC01561Q8N1V8 128 aa12.91□□□□□ -0.34
TRIM8-203ENST00000479004 S100A6P06703 90 aa12.89□□□□□ -0.35
TRIM8-203ENST00000479004 IGLC3P0DOY3 106 aa12.89□□□□□ -0.35
TRIM8-203ENST00000479004 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
TRIM8-203ENST00000479004 MAJINQ3KP22 176 aa12.88□□□□□ -0.35
TRIM8-203ENST00000479004 LINC00469Q8N7U9 141 aa12.88□□□□□ -0.35
TRIM8-203ENST00000479004 LINC00526Q96FQ7 95 aa12.88□□□□□ -0.35
TRIM8-203ENST00000479004 MAP1LC3CQ9BXW4 147 aa12.88□□□□□ -0.35
TRIM8-203ENST00000479004 IGLV5-45A0A087WSX0 123 aa12.87□□□□□ -0.35
TRIM8-203ENST00000479004 IGKV2-24A0A0C4DH68 120 aa12.87□□□□□ -0.35
TRIM8-203ENST00000479004 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
TRIM8-203ENST00000479004 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
TRIM8-203ENST00000479004 CDKN2A-AS1Q9UH64 79 aa12.87□□□□□ -0.35
TRIM8-203ENST00000479004 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
TRIM8-203ENST00000479004 A0A096LNI7 61 aa12.85□□□□□ -0.35
TRIM8-203ENST00000479004 F8VRH5 84 aa12.85□□□□□ -0.35
TRIM8-203ENST00000479004 H0Y8G0 127 aa12.85□□□□□ -0.35
TRIM8-203ENST00000479004 H3BRM9 83 aa12.85□□□□□ -0.35
TRIM8-203ENST00000479004 ORAOV1Q8WV07 137 aa12.85□□□□□ -0.35
TRIM8-203ENST00000479004 CARD19Q96LW7 228 aa12.85□□□□□ -0.35
TRIM8-203ENST00000479004 TNXBP22105 4242 aa12.84□□□□□ -0.35
TRIM8-203ENST00000479004 SPAG11BQ08648 103 aa12.84□□□□□ -0.35
TRIM8-203ENST00000479004 Q6ZRU5 148 aa12.84□□□□□ -0.35
TRIM8-203ENST00000479004 STPG4Q8N801 248 aa12.84□□□□□ -0.35
TRIM8-203ENST00000479004 SERTAD4-AS1Q5TG53 156 aa12.83□□□□□ -0.36
TRIM8-203ENST00000479004 C7orf33Q8WU49 177 aa12.83□□□□□ -0.36
TRIM8-203ENST00000479004 MRPL35Q9NZE8 188 aaKnown RBP12.83□□□□□ -0.36
TRIM8-203ENST00000479004 PKIGQ9Y2B9 76 aa12.83□□□□□ -0.36
TRIM8-203ENST00000479004 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
TRIM8-203ENST00000479004 ZNF22P17026 224 aaPredicted RBP12.82□□□□□ -0.36
TRIM8-203ENST00000479004 SYCNQ0VAF6 134 aa12.82□□□□□ -0.36
TRIM8-203ENST00000479004 ODF1Q14990 250 aa12.82□□□□□ -0.36
TRIM8-203ENST00000479004 C2orf48Q96LS8 159 aa12.82□□□□□ -0.36
TRIM8-203ENST00000479004 LINC00474Q9P2X8 69 aa12.82□□□□□ -0.36
TRIM8-203ENST00000479004 F8WDY8 70 aa12.81□□□□□ -0.36
TRIM8-203ENST00000479004 S100A2P29034 98 aa12.81□□□□□ -0.36
TRIM8-203ENST00000479004 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
TRIM8-203ENST00000479004 SYS1-DBNDD2H3BUS1 97 aa12.8□□□□□ -0.36
TRIM8-203ENST00000479004 TMEM170BQ5T4T1 132 aa12.8□□□□□ -0.36
TRIM8-203ENST00000479004 SMIM1B2RUZ4 78 aa12.79□□□□□ -0.36
TRIM8-203ENST00000479004 PRSS2P07478 247 aa12.79□□□□□ -0.36
TRIM8-203ENST00000479004 SPINK8P0C7L1 97 aa12.78□□□□□ -0.36
TRIM8-203ENST00000479004 PLNP26678 52 aa12.78□□□□□ -0.36
TRIM8-203ENST00000479004 PET117Q6UWS5 81 aa12.78□□□□□ -0.36
TRIM8-203ENST00000479004 CAMK2N2Q96S95 79 aa12.78□□□□□ -0.36
TRIM8-203ENST00000479004 DPM2O94777 84 aa12.77□□□□□ -0.37
TRIM8-203ENST00000479004 SNRPEP62304 92 aaKnown RBP12.77□□□□□ -0.37
TRIM8-203ENST00000479004 KIAA0087Q14695 138 aa12.77□□□□□ -0.37
TRIM8-203ENST00000479004 Q8IZM0 81 aa12.77□□□□□ -0.37
TRIM8-203ENST00000479004 TOMM7Q9P0U1 55 aa12.77□□□□□ -0.37
TRIM8-203ENST00000479004 C3orf79P0CE67 100 aa12.76□□□□□ -0.37
TRIM8-203ENST00000479004 MT1HL1P0DM35 61 aa12.76□□□□□ -0.37
TRIM8-203ENST00000479004 KRTDAPP60985 99 aa12.76□□□□□ -0.37
TRIM8-203ENST00000479004 C5orf52A6NGY3 159 aa12.75□□□□□ -0.37
TRIM8-203ENST00000479004 NDUFA1O15239 70 aa12.75□□□□□ -0.37
TRIM8-203ENST00000479004 PTTG1IPP53801 180 aa12.75□□□□□ -0.37
TRIM8-203ENST00000479004 PRR3P79522 188 aaKnown RBP12.75□□□□□ -0.37
TRIM8-203ENST00000479004 C6orf226Q5I0X4 101 aa12.75□□□□□ -0.37
TRIM8-203ENST00000479004 HIST1H2BLQ99880 126 aa12.75□□□□□ -0.37
TRIM8-203ENST00000479004 LOC107984640A0A0U1RRK4 108 aa12.74□□□□□ -0.37
TRIM8-203ENST00000479004 IGKCP01834 107 aa12.74□□□□□ -0.37
TRIM8-203ENST00000479004 COX7B2Q8TF08 81 aa12.74□□□□□ -0.37
TRIM8-203ENST00000479004 PMCHL2Q9BQD1 86 aa12.74□□□□□ -0.37
TRIM8-203ENST00000479004 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
TRIM8-203ENST00000479004 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
TRIM8-203ENST00000479004 CKS1BP61024 79 aa12.73□□□□□ -0.37
TRIM8-203ENST00000479004 LINC01545Q5VT33 79 aa12.73□□□□□ -0.37
TRIM8-203ENST00000479004 CXCL5P42830 114 aa12.72□□□□□ -0.37
TRIM8-203ENST00000479004 GAGE2BQ13066 116 aa12.72□□□□□ -0.37
TRIM8-203ENST00000479004 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
TRIM8-203ENST00000479004 C20orf202A1L168 122 aa12.71□□□□□ -0.37
TRIM8-203ENST00000479004 UBR4Q5T4S7 5183 aa12.71□□□□□ -0.38
TRIM8-203ENST00000479004 UNQ6190/PRO20217Q6UXQ8 127 aa12.7□□□□□ -0.38
TRIM8-203ENST00000479004 TRBV30A0A0K0K1B3 111 aa12.69□□□□□ -0.38
TRIM8-203ENST00000479004 AKR1D1P51857 326 aa12.69□□□□□ -0.38
TRIM8-203ENST00000479004 HERVK_113P61574 105 aa12.69□□□□□ -0.38
TRIM8-203ENST00000479004 C2orf82Q6UX34 121 aa12.69□□□□□ -0.38
TRIM8-203ENST00000479004 A0A1W2PNN7 141 aa12.68□□□□□ -0.38
TRIM8-203ENST00000479004 C10orf25Q5T742 122 aa12.68□□□□□ -0.38
TRIM8-203ENST00000479004 PLA2G2DQ9UNK4 145 aa12.68□□□□□ -0.38
TRIM8-203ENST00000479004 C6orf48Q9UBA6 75 aa12.67□□□□□ -0.38
TRIM8-203ENST00000479004 Q6ZRP5 223 aa12.66□□□□□ -0.38
TRIM8-203ENST00000479004 TMA7Q9Y2S6 64 aaKnown RBP12.66□□□□□ -0.38
TRIM8-203ENST00000479004 RPL18AQ02543 176 aaKnown RBP12.65□□□□□ -0.38
TRIM8-203ENST00000479004 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
TRIM8-203ENST00000479004 C9orf116Q5BN46 136 aaPredicted RBP12.64□□□□□ -0.39
TRIM8-203ENST00000479004 SPINK6Q6UWN8 80 aa12.64□□□□□ -0.39
TRIM8-203ENST00000479004 LEPROTO15243 131 aa12.63□□□□□ -0.39
TRIM8-203ENST00000479004 SRSF9Q13242 221 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM8-203ENST00000479004 PLEKHB2Q96CS7 222 aa12.63□□□□□ -0.39
TRIM8-203ENST00000479004 LINC01600Q96MT4 127 aa12.63□□□□□ -0.39
TRIM8-203ENST00000479004 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
TRIM8-203ENST00000479004 E9PLD3 99 aa12.6□□□□□ -0.39
TRIM8-203ENST00000479004 NDUFC2-KCTD14E9PQ53 114 aa12.59□□□□□ -0.39
TRIM8-203ENST00000479004 ZNF625Q96I27 306 aaPredicted RBP12.59□□□□□ -0.39
TRIM8-203ENST00000479004 J3QQQ9 107 aa12.58□□□□□ -0.4
TRIM8-203ENST00000479004 LGALS3P17931 250 aaKnown RBP12.57□□□□□ -0.4
TRIM8-203ENST00000479004 REG3GQ6UW15 175 aa12.57□□□□□ -0.4
TRIM8-203ENST00000479004 PHF5AQ7RTV0 110 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms