RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 PIEZO1Q92508 2521 aa0.39□□□□□ -2.35
VLDLR-204ENST00000478776 ABCC3O15438 1527 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 MYO3AQ8NEV4 1616 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 F8P00451 2351 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 RGPD4Q7Z3J3 1758 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 SETBP1Q9Y6X0 1596 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 SPINK1P00995 79 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 ETDBQ3ZM63 59 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 ZNF720Q7Z2F6 126 aa0.38□□□□□ -2.35
VLDLR-204ENST00000478776 H0Y9P7 68 aa0.37□□□□□ -2.35
VLDLR-204ENST00000478776 GNG2P59768 71 aa0.37□□□□□ -2.35
VLDLR-204ENST00000478776 WFDC2Q14508 124 aa0.37□□□□□ -2.35
VLDLR-204ENST00000478776 C20orf78Q9BR46 151 aa0.37□□□□□ -2.35
VLDLR-204ENST00000478776 CUX1P39880 1505 aa0.37□□□□□ -2.35
VLDLR-204ENST00000478776 EDC4Q6P2E9 1401 aaKnown RBP0.37□□□□□ -2.35
VLDLR-204ENST00000478776 NAV2Q8IVL1 2488 aa0.37□□□□□ -2.35
VLDLR-204ENST00000478776 C5P01031 1676 aa0.37□□□□□ -2.35
VLDLR-204ENST00000478776 RB1CC1Q8TDY2 1594 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 MYH4Q9Y623 1939 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 FXYD6-FXYD2A0A087WZ82 144 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 PVALEFA0A1B0GWK0 134 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 F8WEM9 126 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 Q5VSD8 79 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 ALKAL2Q6UX46 152 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 C6orf201Q7Z4U5 140 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 DEFB107AQ8IZN7 70 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 HIGD1BQ9P298 99 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 SPTBN2O15020 2390 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 C2CD3Q4AC94 2353 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 RGPD3A6NKT7 1758 aaPredicted RBP0.36□□□□□ -2.35
VLDLR-204ENST00000478776 PLCE1Q9P212 2302 aa0.36□□□□□ -2.35
VLDLR-204ENST00000478776 UBR1Q8IWV7 1749 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 CRYBG1Q9Y4K1 1723 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 KIAA0556O60303 1618 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 ZNF292O60281 2723 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 PPRC1Q5VV67 1664 aaKnown RBP0.35□□□□□ -2.35
VLDLR-204ENST00000478776 A0A1B0GU69 56 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 PYY3Q5JQD4 70 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 PSENENQ9NZ42 101 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 DNAJC13O75165 2243 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
VLDLR-204ENST00000478776 MUC5ACP98088 5654 aa0.34□□□□□ -2.35
VLDLR-204ENST00000478776 COX6B1P14854 86 aa0.34□□□□□ -2.36
VLDLR-204ENST00000478776 SMIM11AP58511 58 aa0.34□□□□□ -2.36
VLDLR-204ENST00000478776 GNGT1P63211 74 aa0.34□□□□□ -2.36
VLDLR-204ENST00000478776 C9orf62Q8N4C0 152 aa0.34□□□□□ -2.36
VLDLR-204ENST00000478776 GOLGA4Q13439 2230 aaKnown RBP0.34□□□□□ -2.36
VLDLR-204ENST00000478776 LRRC37AA6NMS7 1700 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 SAMD9Q5K651 1589 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 ANKRD36A6QL64 1941 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 PPLO60437 1756 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 ANKRD17O75179 2603 aaKnown RBP0.33□□□□□ -2.36
VLDLR-204ENST00000478776 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 D6R8Y8 96 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 K7EP34 96 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 LEPROTL1O95214 131 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 CFDP00746 253 aaPredicted RBP0.33□□□□□ -2.36
VLDLR-204ENST00000478776 PEA15Q15121 130 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 MUSTN1Q8IVN3 82 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 CCDC141Q6ZP82 1450 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 OTOGQ6ZRI0 2925 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 USF3Q68DE3 2245 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 PIEZO2Q9H5I5 2752 aa0.33□□□□□ -2.36
VLDLR-204ENST00000478776 PLIN4Q96Q06 1357 aa0.32□□□□□ -2.36
VLDLR-204ENST00000478776 TSC2P49815 1807 aa0.32□□□□□ -2.36
VLDLR-204ENST00000478776 K7EQZ3 153 aa0.32□□□□□ -2.36
VLDLR-204ENST00000478776 HMGN2P05204 90 aaKnown RBP0.32□□□□□ -2.36
VLDLR-204ENST00000478776 USMG5Q96IX5 58 aa0.32□□□□□ -2.36
VLDLR-204ENST00000478776 U3KQA8 63 aa0.32□□□□□ -2.36
VLDLR-204ENST00000478776 ALKQ9UM73 1620 aa0.31□□□□□ -2.36
VLDLR-204ENST00000478776 ZFYVE26Q68DK2 2539 aa0.31□□□□□ -2.36
VLDLR-204ENST00000478776 SPRR1AP35321 89 aa0.31□□□□□ -2.36
VLDLR-204ENST00000478776 DEFB109BQ30KR1 87 aa0.31□□□□□ -2.36
VLDLR-204ENST00000478776 UBE2D4Q9Y2X8 147 aa0.31□□□□□ -2.36
VLDLR-204ENST00000478776 SLIT1O75093 1534 aa0.31□□□□□ -2.36
VLDLR-204ENST00000478776 PKD1L3Q7Z443 1732 aa0.3□□□□□ -2.36
VLDLR-204ENST00000478776 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
VLDLR-204ENST00000478776 CYB5AP00167 134 aa0.3□□□□□ -2.36
VLDLR-204ENST00000478776 S100A16Q96FQ6 103 aaKnown RBP0.3□□□□□ -2.36
VLDLR-204ENST00000478776 RABAC1Q9UI14 185 aa0.3□□□□□ -2.36
VLDLR-204ENST00000478776 MAP3K4Q9Y6R4 1608 aa0.3□□□□□ -2.36
VLDLR-204ENST00000478776 SYNE1Q8NF91 8797 aaKnown RBP0.29□□□□□ -2.36
VLDLR-204ENST00000478776 MED14O60244 1454 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 IGF2RP11717 2491 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 KIF20BQ96Q89 1820 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 NEXMIFQ5QGS0 1516 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 DOPEY2Q9Y3R5 2298 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 KIF14Q15058 1648 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 SPRR1BP22528 89 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 NMSQ5H8A3 153 aa0.29□□□□□ -2.36
VLDLR-204ENST00000478776 LRP1Q07954 4544 aaKnown RBP0.28□□□□□ -2.36
VLDLR-204ENST00000478776 FMN2Q9NZ56 1722 aa0.28□□□□□ -2.36
VLDLR-204ENST00000478776 CSMD3Q7Z407 3707 aa0.28□□□□□ -2.36
VLDLR-204ENST00000478776 IGLC2P0DOY2 106 aa0.28□□□□□ -2.36
VLDLR-204ENST00000478776 IGLC3P0DOY3 106 aa0.28□□□□□ -2.36
VLDLR-204ENST00000478776 COX8AP10176 69 aa0.28□□□□□ -2.36
VLDLR-204ENST00000478776 UACAQ9BZF9 1416 aa0.28□□□□□ -2.37
VLDLR-204ENST00000478776 UNC79Q9P2D8 2635 aa0.28□□□□□ -2.37
VLDLR-204ENST00000478776 SNRPFP62306 86 aaKnown RBP0.27□□□□□ -2.37
VLDLR-204ENST00000478776 NKTRP30414 1462 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms