RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CENPWQ5EE01 88 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 IBA57Q5T440 356 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 MIC13Q5XKP0 118 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 NIT1Q86X76 327 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 C1orf158Q8N1D5 194 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 LINC00304Q8N9R0 145 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 C18orf32Q8TCD1 76 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 TMEM263Q8WUH6 116 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 LINC00467Q9BRT7 94 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 LENEPQ9Y5L5 61 aa2.03□□□□□ -2.08
CDC42BPA-212ENST00000478573 TRBV19A0A075B6N1 114 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRAV8-3A0A0A6YYJ7 113 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 C19orf71A6NCJ1 209 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 LINC01546A6NGU7 62 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 H3BRM9 83 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 SYS1-DBNDD2H3BUS1 97 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 J3QR89 54 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 M0R2Z0 102 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 NUPR1O60356 82 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 LY6G6CO95867 125 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 NBEAP1P0C6P0 100 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 COX8AP10176 69 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 G0S2P27469 103 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 FXYD7P58549 80 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 DEFB1P60022 68 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 KRTDAPP60985 99 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 DAD1P61803 113 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 LGALS9BQ3B8N2 356 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 OCIAD2Q56VL3 154 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 LINC01545Q5VT33 79 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 AMN1Q8IY45 258 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 C3orf22Q8N5N4 141 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 C5orf17Q8NAS9 161 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 FAM167A-AS1Q96KT0 104 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 DERL1Q9BUN8 251 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 HIGD1BQ9P298 99 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 EPDR1Q9UM22 224 aa2.02□□□□□ -2.09
CDC42BPA-212ENST00000478573 DNAH10Q8IVF4 4471 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 GRIFINA4D1Z8 144 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 GGTLC3B5MD39 225 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 H3BNG1 76 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 H3BQ85 93 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 K7EMI3 77 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 TAX1BP3O14907 124 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 DEFB4AO15263 64 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 LEPROTL1O95214 131 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 LTAP01374 205 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 ATP5G1P05496 136 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 SRIP30626 198 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 TCL1AP56279 114 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 UBE2L3P68036 154 aaKnown RBP2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 HSD52Q0P140 79 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 TDRG1Q3Y452 100 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 BVES-AS1Q5T3Y7 98 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 TMEM78Q5T7P6 136 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 NUP35Q8NFH5 326 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 FXYD5Q96DB9 178 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 ANAPC13Q9BS18 74 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 SPANXDQ9BXN6 97 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 CST9LQ9H4G1 147 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 OTORQ9NRC9 128 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 TIMM8BQ9Y5J9 83 aaPredicted RBP2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 DNAH17Q9UFH2 4485 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 HYDINQ4G0P3 5121 aa2.01□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRAV12-2A0A075B6T6 113 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 IGHV1-24A0A0C4DH33 117 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 A0A1B0GUT8 65 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 HIGD1CA8MV81 97 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 K7ERS5 55 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 M0QXV9 152 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 M0R3E3 92 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 PYYP10082 97 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 TMEM97Q5BJF2 176 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 MIR17HGQ75NE6 70 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 UBE2DNLQ8IWF7 75 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 ZFAND2AQ8N6M9 145 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 TMEM75Q8N9X5 138 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 AP1S3Q96PC3 154 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 LINC01587Q99440 93 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 UPK3BQ9BT76 320 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 CNFNQ9BYD5 112 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 R4GN34 69 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 PKHD1P08F94 4074 aa2□□□□□ -2.09
CDC42BPA-212ENST00000478573 BIRC6Q9NR09 4857 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 IGKV2-40A0A087WW87 121 aaPredicted RBP1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRAV5A0A0B4J249 113 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRAV12-3A0A0B4J271 114 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 IGKV2-24A0A0C4DH68 120 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 F2Z2F3 143 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 F8W1H4 67 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 K7EP34 96 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 SPINK4O60575 86 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 IGKV2D-40P01614 121 aaPredicted RBP1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 TCRAP04437 139 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 EVI2AP22794 236 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 HINT1P49773 126 aaPredicted RBP1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 EMP1P54849 157 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 LYRM7Q5U5X0 104 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 ADM2Q7Z4H4 148 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 562.8 ms