RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KRTAP17-1Q9BYP8 105 aa4.44□□□□□ -1.7
BRCA1-215ENST00000478531 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-215ENST00000478531 A0A087WZ39 114 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 IGKV2-24A0A0C4DH68 120 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 CHTF8P0CG12 524 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 HERVK_113P63121 156 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 SDIM1Q6ZPB5 146 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 Q6ZRU5 148 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 CHCHD1Q96BP2 118 aaKnown RBP4.43□□□□□ -1.7
BRCA1-215ENST00000478531 CHAC1Q9BUX1 264 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 CST9LQ9H4G1 147 aa4.43□□□□□ -1.7
BRCA1-215ENST00000478531 PANO1I0J062 215 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 HSBP1O75506 76 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 SEC11AP67812 179 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 PMVKQ15126 192 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 Q8N1X5 172 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 CIRBP-AS1Q8TBR5 109 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 TOMM7Q9P0U1 55 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 CDKN2A-AS1Q9UH64 79 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 SERF1AO75920 110 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 PDZD11Q5EBL8 140 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 Q5VSD8 79 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 FAM19A3Q7Z5A8 133 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 FAM19A2Q8N3H0 131 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 KRTAP4-5Q9BYR2 181 aa4.42□□□□□ -1.7
BRCA1-215ENST00000478531 A0A096LNI7 61 aa4.41□□□□□ -1.7
BRCA1-215ENST00000478531 TINCRA0A1B0GVN0 87 aa4.41□□□□□ -1.7
BRCA1-215ENST00000478531 NDUFA1O15239 70 aa4.41□□□□□ -1.7
BRCA1-215ENST00000478531 DLEU1O43261 78 aa4.41□□□□□ -1.7
BRCA1-215ENST00000478531 ATP5LO75964 103 aa4.41□□□□□ -1.7
BRCA1-215ENST00000478531 PRSS2P07478 247 aa4.41□□□□□ -1.7
BRCA1-215ENST00000478531 RPL18AQ02543 176 aaKnown RBP4.41□□□□□ -1.7
BRCA1-215ENST00000478531 C2orf48Q96LS8 159 aa4.41□□□□□ -1.7
BRCA1-215ENST00000478531 MYCBP2O75592 4640 aa4.4□□□□□ -1.7
BRCA1-215ENST00000478531 EPM2AB3EWF7 344 aa4.4□□□□□ -1.7
BRCA1-215ENST00000478531 SCGB1A1P11684 91 aa4.4□□□□□ -1.7
BRCA1-215ENST00000478531 C10orf25Q5T742 122 aa4.4□□□□□ -1.7
BRCA1-215ENST00000478531 C2orf82Q6UX34 121 aa4.4□□□□□ -1.7
BRCA1-215ENST00000478531 UNQ6190/PRO20217Q6UXQ8 127 aa4.4□□□□□ -1.7
BRCA1-215ENST00000478531 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.7
BRCA1-215ENST00000478531 LOC107984640A0A0U1RRK4 108 aa4.4□□□□□ -1.71
BRCA1-215ENST00000478531 SPINK8P0C7L1 97 aa4.4□□□□□ -1.71
BRCA1-215ENST00000478531 LINC00310P59036 64 aa4.4□□□□□ -1.71
BRCA1-215ENST00000478531 GAGE2BQ13066 116 aa4.4□□□□□ -1.71
BRCA1-215ENST00000478531 IFI27L1Q96BM0 104 aa4.4□□□□□ -1.71
BRCA1-215ENST00000478531 C14orf144Q96I85 54 aa4.4□□□□□ -1.71
BRCA1-215ENST00000478531 PKIGQ9Y2B9 76 aa4.4□□□□□ -1.71
BRCA1-215ENST00000478531 A0A087WYN8 130 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BKO60814 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BJP06899 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BOP23527 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BBP33778 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BDP58876 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 CKS1BP61024 79 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BCP62807 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 KIAA0087Q14695 138 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST2H2BEQ16778 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-215ENST00000478531 LINC01561Q8N1V8 128 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BHQ93079 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BNQ99877 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 HIST1H2BMQ99879 126 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 C6orf48Q9UBA6 75 aa4.39□□□□□ -1.71
BRCA1-215ENST00000478531 FLG2Q5D862 2391 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-215ENST00000478531 IGLV5-45A0A087WSX0 123 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 H3BRM9 83 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 NUPR1O60356 82 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 EIF4EBP3O60516 100 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-215ENST00000478531 FABP4P15090 132 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 AKR1D1P51857 326 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 CIRBPQ14011 172 aaKnown RBP4.38□□□□□ -1.71
BRCA1-215ENST00000478531 Q8IZM0 81 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 STPG4Q8N801 248 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 MRPL35Q9NZE8 188 aaKnown RBP4.38□□□□□ -1.71
BRCA1-215ENST00000478531 C11orf86A6NJI1 115 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 ZNF22P17026 224 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-215ENST00000478531 RNF151Q2KHN1 245 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 C9orf116Q5BN46 136 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-215ENST00000478531 TMEM170BQ5T4T1 132 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 COX7B2Q8TF08 81 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 LINC00474Q9P2X8 69 aa4.38□□□□□ -1.71
BRCA1-215ENST00000478531 PKHD1L1Q86WI1 4243 aa4.37□□□□□ -1.71
BRCA1-215ENST00000478531 TRAV12-1A0A0B4J245 112 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 TRBV30A0A0K0K1B3 111 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 PLA2G1BP04054 148 aaKnown RBP4.36□□□□□ -1.71
BRCA1-215ENST00000478531 GAGE2EQ4V326 116 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 SERTAD4-AS1Q5TG53 156 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 Q6ZRP5 223 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 GAGE2DQ9UEU5 116 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 HSPB8Q9UJY1 196 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 F8VRH5 84 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 TSPAN13O95857 204 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
BRCA1-215ENST00000478531 TSTD3H0UI37 97 aa4.35□□□□□ -1.71
BRCA1-215ENST00000478531 VPREB1P12018 145 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms