RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 TRBV20-1A0A075B6N2 111 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 DEFB131BA0A096LNP1 70 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 A0A0J9YWU9 116 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 A4D1N5 150 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 K7EIL1 84 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 K7EP13 123 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 COX7A2LO14548 114 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 Q6ZTC4 211 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 RETNQ9HD89 108 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 SPCS1Q9Y6A9 102 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 VWFP04275 2813 aa5.45□□□□□ -1.54
VMA21-203ENST00000477649 IGKV3OR2-268A0A0C4DH90 116 aa5.44□□□□□ -1.54
VMA21-203ENST00000477649 K7ERJ3 54 aa5.44□□□□□ -1.54
VMA21-203ENST00000477649 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
VMA21-203ENST00000477649 CFC1P0CG37 223 aa5.44□□□□□ -1.54
VMA21-203ENST00000477649 C6orf226Q5I0X4 101 aa5.44□□□□□ -1.54
VMA21-203ENST00000477649 MEIG1Q5JSS6 88 aa5.44□□□□□ -1.54
VMA21-203ENST00000477649 CHCHD10Q8WYQ3 142 aaPredicted RBP5.44□□□□□ -1.54
VMA21-203ENST00000477649 ERG28Q9UKR5 140 aa5.44□□□□□ -1.54
VMA21-203ENST00000477649 CRPP02741 224 aa5.43□□□□□ -1.54
VMA21-203ENST00000477649 MALP21145 153 aa5.43□□□□□ -1.54
VMA21-203ENST00000477649 XCL1P47992 114 aa5.43□□□□□ -1.54
VMA21-203ENST00000477649 COX17Q14061 63 aa5.43□□□□□ -1.54
VMA21-203ENST00000477649 DEFB121Q5J5C9 76 aa5.43□□□□□ -1.54
VMA21-203ENST00000477649 LINC00308Q8TCZ7 52 aa5.43□□□□□ -1.54
VMA21-203ENST00000477649 F8W1H4 67 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 F8WDY8 70 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 TSPAN13O95857 204 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 IGHV3-33P01772 117 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 COX6CP09669 75 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 NANOS2P60321 138 aaKnown RBP5.42□□□□□ -1.54
VMA21-203ENST00000477649 LINC01556Q5JQF7 62 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 ADAMTSL4-AS1Q5T5F5 129 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 CFAP161Q6P656 301 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 C5orf38Q86SI9 138 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 TOMM7Q9P0U1 55 aa5.42□□□□□ -1.54
VMA21-203ENST00000477649 KLK5Q9Y337 293 aaPredicted RBP5.42□□□□□ -1.54
VMA21-203ENST00000477649 TRBV30A0A0K0K1B3 111 aa5.41□□□□□ -1.54
VMA21-203ENST00000477649 NHLRC4P0CG21 123 aaPredicted RBP5.41□□□□□ -1.54
VMA21-203ENST00000477649 CKS1BP61024 79 aa5.41□□□□□ -1.54
VMA21-203ENST00000477649 TRRAPQ9Y4A5 3859 aa5.4□□□□□ -1.54
VMA21-203ENST00000477649 MEGF8Q7Z7M0 2845 aa5.4□□□□□ -1.54
VMA21-203ENST00000477649 TRAV13-2A0A0B4J235 113 aa5.4□□□□□ -1.54
VMA21-203ENST00000477649 FOXI1Q12951 378 aa5.4□□□□□ -1.54
VMA21-203ENST00000477649 B9D2Q9BPU9 175 aa5.4□□□□□ -1.54
VMA21-203ENST00000477649 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
VMA21-203ENST00000477649 KLK12Q9UKR0 248 aa5.4□□□□□ -1.54
VMA21-203ENST00000477649 LOC107984156A0A0G2JMH3 177 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 DNAH10OSP0CZ25 163 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 SCGB1C2P0DMR2 95 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 PSMB2P49721 201 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 CCL18P55774 89 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 LINC00158P58513 81 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 ESRGQ1W209 222 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 ENHOQ6UWT2 76 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 ARL17AQ8IVW1 177 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 CMYA5Q8N3K9 4069 aa5.39□□□□□ -1.55
VMA21-203ENST00000477649 GVQW2A0A096LPI5 108 aaPredicted RBP5.38□□□□□ -1.55
VMA21-203ENST00000477649 GAGE12HA6NDE8 117 aa5.38□□□□□ -1.55
VMA21-203ENST00000477649 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
VMA21-203ENST00000477649 Q1RN00 199 aa5.38□□□□□ -1.55
VMA21-203ENST00000477649 CLPSL2Q6UWE3 100 aa5.38□□□□□ -1.55
VMA21-203ENST00000477649 MIR7-3HGQ8N6C7 128 aa5.38□□□□□ -1.55
VMA21-203ENST00000477649 UBE2WQ96B02 151 aa5.38□□□□□ -1.55
VMA21-203ENST00000477649 NAA38Q9BRA0 125 aaKnown RBP5.38□□□□□ -1.55
VMA21-203ENST00000477649 UPK3BQ9BT76 320 aa5.38□□□□□ -1.55
VMA21-203ENST00000477649 M0QXV9 152 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 NDUFC2O95298 119 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 ATXN8Q156A1 80 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 WFDC10BQ8IUB3 73 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 MRAPQ8TCY5 172 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 RMI2Q96E14 147 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 C1orf43Q9BWL3 253 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
VMA21-203ENST00000477649 IGLV10-54A0A075B6I4 117 aa5.36□□□□□ -1.55
VMA21-203ENST00000477649 RPL13AP40429 203 aaKnown RBP5.36□□□□□ -1.55
VMA21-203ENST00000477649 C2orf48Q96LS8 159 aa5.36□□□□□ -1.55
VMA21-203ENST00000477649 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
VMA21-203ENST00000477649 TGP01266 2768 aa5.36□□□□□ -1.55
VMA21-203ENST00000477649 PRKDCP78527 4128 aaKnown RBP5.35□□□□□ -1.55
VMA21-203ENST00000477649 H3BMG7 143 aa5.35□□□□□ -1.55
VMA21-203ENST00000477649 J3QR89 54 aa5.35□□□□□ -1.55
VMA21-203ENST00000477649 K7ERU9 68 aa5.35□□□□□ -1.55
VMA21-203ENST00000477649 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
VMA21-203ENST00000477649 PRB2P02812 416 aaPredicted RBP5.35□□□□□ -1.55
VMA21-203ENST00000477649 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
VMA21-203ENST00000477649 DAND5Q8N907 189 aa5.35□□□□□ -1.55
VMA21-203ENST00000477649 LINC01600Q96MT4 127 aa5.35□□□□□ -1.55
VMA21-203ENST00000477649 PKD1L1Q8TDX9 2849 aa5.34□□□□□ -1.55
VMA21-203ENST00000477649 NBEAL2Q6ZNJ1 2754 aa5.34□□□□□ -1.55
VMA21-203ENST00000477649 A0A0U1RRA0 63 aa5.34□□□□□ -1.55
VMA21-203ENST00000477649 ZNF561-AS1K7EIQ3 104 aa5.34□□□□□ -1.55
VMA21-203ENST00000477649 PFN2P35080 140 aa5.34□□□□□ -1.55
VMA21-203ENST00000477649 RPL28P46779 137 aaKnown RBP5.34□□□□□ -1.55
VMA21-203ENST00000477649 NPC2P61916 151 aa5.34□□□□□ -1.55
VMA21-203ENST00000477649 NTN5Q8WTR8 489 aaPredicted RBP5.34□□□□□ -1.55
VMA21-203ENST00000477649 H0YGX0 51 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms