RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 SPENQ96T58 3664 aaKnown RBP3.35□□□□□ -1.87
PTCD3-212ENST00000477520 IGHV3-64A0A075B6Q5 118 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 A0A087WVE0 104 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 IGHV3-72A0A0B4J1Y9 119 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 TMEM89A2RUT3 159 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 NDUFS5O43920 106 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 SNRPD3P62318 126 aaKnown RBP3.35□□□□□ -1.87
PTCD3-212ENST00000477520 DEFB113Q30KQ7 82 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 C15orf32Q32M92 178 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 CCL17Q92583 94 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 TNCP24821 2201 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 ABCA1O95477 2261 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 CSPG4Q6UVK1 2322 aa3.35□□□□□ -1.87
PTCD3-212ENST00000477520 TLN2Q9Y4G6 2542 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 ITPR3Q14573 2671 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 CLPSL1A2RUU4 121 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 NDUFA4O00483 81 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 APELAP0DMC3 54 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 SAA4P35542 130 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 ENHOQ6UWT2 76 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-212ENST00000477520 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-212ENST00000477520 Q9H8V8 135 aa3.34□□□□□ -1.87
PTCD3-212ENST00000477520 SETXQ7Z333 2677 aaKnown RBP3.33□□□□□ -1.88
PTCD3-212ENST00000477520 IGHV3-16A0A0C4DH30 117 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 TRBV7-4A0A0J9YYF1 115 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 H3BUA1 57 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 GNRH2O43555 120 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 LY6G6DO95868 133 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 FUSP35637 526 aaKnown RBP eCLIP3.33□□□□□ -1.88
PTCD3-212ENST00000477520 HILS1P60008 231 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 DAD1P61803 113 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 DGAT2L7PQ6IED9 249 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 MIR7-3HGQ8N6C7 128 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 Q8N6K4 173 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 C11orf44Q8N8P7 122 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 MUC7Q8TAX7 377 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 ACANP16112 2415 aa3.33□□□□□ -1.88
PTCD3-212ENST00000477520 FLNAP21333 2647 aaKnown RBP3.32□□□□□ -1.88
PTCD3-212ENST00000477520 FBN2P35556 2912 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 A0A087WZ39 114 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 A0A1B0GW54 56 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 LYNX1G3V0Z9 82 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 K7EMT4 169 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 LECT2O14960 151 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 LY6HO94772 140 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 LYNX1P0DP58 116 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 MT3P25713 68 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 UBE2BP63146 152 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 PRR9Q5T870 116 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 C9orf66Q5T8R8 295 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 Q6ZSV7 163 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 TMEM254Q8TBM7 123 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 SMIM11BQ8TCY0 68 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 USMG5Q96IX5 58 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 BPESC1Q9GZL8 116 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 Q9HAA7 133 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 CDKN2A-AS1Q9UH64 79 aa3.32□□□□□ -1.88
PTCD3-212ENST00000477520 MAST4O15021 2626 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 HIVEP2P31629 2446 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 NAV3Q8IVL0 2385 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 IGHV1OR15-1A0A075B7D0 117 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 A0A087WWL8 130 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 ODF3BA8MYP8 253 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 PRYO14603 147 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 UBE2L6O14933 153 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 IGHV4-38-2P0DP08 117 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 LINC01547P58512 204 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-212ENST00000477520 RPL36AP83881 106 aaKnown RBP3.31□□□□□ -1.88
PTCD3-212ENST00000477520 DEFB114Q30KQ6 69 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 SOSTDC1Q6X4U4 206 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 STHQ8IWL8 128 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 C6orf223Q8N319 242 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 RMI2Q96E14 147 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 TM2D3Q9BRN9 247 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 CHCHD7Q9BUK0 85 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 RETNQ9HD89 108 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 TEX15Q9BXT5 2789 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 ARHGAP32A7KAX9 2087 aa3.31□□□□□ -1.88
PTCD3-212ENST00000477520 PDZD2O15018 2839 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 SONP18583 2426 aaKnown RBP3.3□□□□□ -1.88
PTCD3-212ENST00000477520 F8P00451 2351 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 IGHV4-30-2A0A087WSY4 118 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 A0A087WYN8 130 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 IGHV7-81A0A0B4J1V7 117 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 TRBV6-4A0A1B0GX49 114 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 B4DSR2 109 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 NCR3O14931 201 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 NDUFB1O75438 58 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 NREPQ16612 68 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 FAM74A4Q5TZK3 123 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 LYPD2Q6UXB3 125 aa3.3□□□□□ -1.88
PTCD3-212ENST00000477520 CLEC19AQ6UXS0 136 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms